@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv0147: (2016-04-19 )
MSDRVKAVAPPDGRTMMTTESVARKTQKSETEAPREPAPVSDEKQTDVAKTVARLRKTFASGRTRSVEWRKQQLRALQKLMDENEDAIAAALAEDLDRNPFEAYLADIATTSAEAKYAAKRVRRWMRRRYLLLEVPQLPGRGWVEYEPYGTVLIIGAWNYPFYLTLGPAVGAIAAGNAVVLKPSEIAAASAHLMTELVYRYLDTEAIAVVQGDGAVSQELIAQGFDRVMFTGGTEIGRKVYEGAAPHLTPVTLELGGKSPVIVAADADVDVAAKRIAWIKLLNAGQTCVAPDYVLADATVRDELVSKITAALTKFRSGAPQGMRIVNQRQFDRLSGYLAAAKTDAAADGGGVVVGGDCDASNLRIQPTVVVDPDPDGPLMSNEIFGPILPVVTVKSLDDAIRFVNSRPKPLSAYLFTKSRAVRERVIREVPAGGMMVNHLAFQVSTAKLPFGGVGASGMGAYHGRWGFEEFSHRKSVLTKPTRPDLSSFIYPPYTERAIKVARRLF

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAI_A_9(4X4L)
AL1A1_HUMAN
[Raw transfer]



NAI_A_2(4WB9)
AL1A1_HUMAN
[Raw transfer]



NAD_A_3(1AD3)
AL3A1_RAT
[Raw transfer]



TXE_A_4(5AC2)
AL1A1_HUMAN
[Raw transfer]



NAD_A_3(1AD3)
AL3A1_RAT
[Raw transfer]



NAD_B_15(4PXL)
?
[Raw transfer]



NAD_B_4(1AD3)
AL3A1_RAT
[Raw transfer]



NAD_A_4(3B4W)
?
[Raw transfer]



GOL_A_7(3B4W)
?
[Raw transfer]



1VL_B_7(4L1O)
AL3A1_HUMAN
[Raw transfer]



I1E_B_10(3SZB)
AL3A1_HUMAN
[Raw transfer]
70 HHSearch 98.1141%-104 - C3 -4QGK - AL3A2_HUMAN -
72 HHSearch 97.5643%-105 - C3 -3SZA - AL3A1_HUMAN -
7 PsiBlast_PDB 97.0640%-103 - C3 -4QGK - AL3A2_HUMAN -
21 PsiBlast_CBE 96.8944%-103 - C3 -1AD3 5.1 AL3A1_RAT
6 PsiBlast_PDB 96.8742%-105 - C3 -4L1O - AL3A1_HUMAN -
2 PsiBlast_PDB 96.8142%-104 - C3 -3SZA - AL3A1_HUMAN -
29 PsiBlast_CBE 96.7442%-105 - C3 -4H80 - AL3A1_HUMAN -
22 PsiBlast_CBE 96.7142%-104 - C3 -4L2O - AL3A1_HUMAN -
26 PsiBlast_CBE 96.6442%-105 - C3 -4H80 - AL3A1_HUMAN -
27 PsiBlast_CBE 96.6042%-105 - C3 -4H80 - AL3A1_HUMAN -
73 Fugue 96.5943%-104 - C3 -1AD3 4.9 AL3A1_RAT
28 PsiBlast_CBE 96.5842%-105 - C3 -4H80 - AL3A1_HUMAN -
5 PsiBlast_PDB 96.5242%-103 - C3 -4L2O - AL3A1_HUMAN -
1 PsiBlast_PDB 96.4744%-106 - C3 -1AD3 5.0 AL3A1_RAT
3 PsiBlast_PDB 96.4342%-103 - C3 -3SZB - AL3A1_HUMAN -
33 PsiBlast_CBE 96.4042%-105 - C3 -3SZB 2.7 AL3A1_HUMAN
23 PsiBlast_CBE 96.3242%-102 - C3 -4L2O - AL3A1_HUMAN -
31 PsiBlast_CBE 96.2942%-106 - C3 -4H80 - AL3A1_HUMAN -
34 PsiBlast_CBE 96.1842%-105 - C3 -3SZA - AL3A1_HUMAN -
4 PsiBlast_PDB 96.1742%-104 - C3 -4H80 - AL3A1_HUMAN -
25 PsiBlast_CBE 96.0442%-103 - C3 -4L1O 2.2 AL3A1_HUMAN
19 PsiBlast_PDB 81.7131% -75 - C3 -4PXL 7.4 ?
44 PsiBlast_CBE 73.4733% -93 - C3 -3B4W 8.5 ?