@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv0357c: (2016-04-21 )
MPAIVLIGAQWGDEGKGKATDLLGGRVQWVVRYQGGNNAGHTVVLPTGENFALHLIPSGVLTPGVTNVIGNGVVIDPGVLLNELRGLQDRGVDTAKLLISADAHLLMPYHIAIDKVTERYMGSKKIGTTGRGIGPCYQDKIARIGIRVADVLDPEQLTHKVEAACEFKNQVLVKIYNRKALDPAQVVDALLEQAEGFKHRIADTRLLLNAALEAGETVLLEGSQGTLLDVDHGTYPYVTSSNPTAGGAAVGSGIGPTRIGTVLGILKAYTTRVGSGPFPTELFDEHGEYLSKTGREFGVTTGRRRRCGWFDAVIARYAARVNGITDYFLTKLDVLSSLESVPVCVGYEIDGRRTRDMPMTQRDLCRAKPVYEELPGWWEDISGAREFDDLPAKARDYVLRLEQLAGAPVSCIGVGPGREQTIVRRDVLQDRP

Atome Classification :

(49 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PGS_A_5(1NHT)
PURA_ECOLI
[Raw transfer]



PGS_A_5(1KSZ)
PURA_ECOLI
[Raw transfer]



DOI_A_3(2GCQ)
PURA_ECOLI
[Raw transfer]



DOI_A_3(2DGN)
PURA1_MOUSE
[Raw transfer]



2SA_A_5(1MEZ)
PURA1_MOUSE
[Raw transfer]



IMP_C_3(1KJX)
PURA_ECOLI
[Raw transfer]



RPL_A_5(1QF5)
PURA_ECOLI
[Raw transfer]



RPL_A_5(1QF5)
PURA_ECOLI
[Raw transfer]



RPD_A_5(1QF4)
PURA_ECOLI
[Raw transfer]



IMP_A_8(1IWE)
PURA1_MOUSE
[Raw transfer]



IMP_A_5(1KKF)
PURA_ECOLI
[Raw transfer]



IMP_E_5(1KKB)
PURA_ECOLI
[Raw transfer]



AMP_A_3(4M9D)
PURA_BACAN
[Raw transfer]



AMP_E_5(1MF1)
PURA1_MOUSE
[Raw transfer]



AMP_C_3(1SON)
PURA_ECOLI
[Raw transfer]



H5P_A_6(1SOO)
PURA_ECOLI
[Raw transfer]



GCP_A_3(1HOP)
PURA_ECOLI
[Raw transfer]



GCP_B_4(1HOP)
PURA_ECOLI
[Raw transfer]



GDP_C_3(1DJ2)
PURA_ARATH
[Raw transfer]



GPX_A_4(1CH8)
PURA_ECOLI
[Raw transfer]



GDP_A_4(1CG4)
PURA_ECOLI
[Raw transfer]



GDP_C_3(1DJ2)
PURA_ARATH
[Raw transfer]



GDP_A_5(1LON)
PURA1_MOUSE
[Raw transfer]



GDP_A_6(1P9B)
PURA_PLAFA
[Raw transfer]



GDP_A_4(1CIB)
PURA_ECOLI
[Raw transfer]



GDP_D_4(1DJ3)
PURA_WHEAT
[Raw transfer]



GDP_C_3(1DJ3)
PURA_WHEAT
[Raw transfer]



GDP_D_4(1DJ2)
PURA_ARATH
[Raw transfer]



GDP_A_6(1GIM)
PURA_ECOLI
[Raw transfer]



GDP_A_6(1P9B)
PURA_PLAFA
[Raw transfer]



GDP_A_4(1JUY)
PURA_ECOLI
[Raw transfer]



GDP_A_4(2GCQ)
PURA_ECOLI
[Raw transfer]



GDP_A_5(1CG3)
PURA_ECOLI
[Raw transfer]



GDP_A_6(1GIN)
PURA_ECOLI
[Raw transfer]



GTP_C_3(1LOO)
PURA1_MOUSE
[Raw transfer]



DPO_A_3(1KKF)
PURA_ECOLI
[Raw transfer]



GDP_A_4(2DGN)
PURA1_MOUSE
[Raw transfer]



GDP_A_5(1CG0)
PURA_ECOLI
[Raw transfer]



GDP_A_5(1MF0)
PURA1_MOUSE
[Raw transfer]



GDP_B_7(1LNY)
PURA1_MOUSE
[Raw transfer]



GDP_A_6(1LNY)
PURA1_MOUSE
[Raw transfer]



GDP_A_5(1CG1)
PURA_ECOLI
[Raw transfer]



GDP_A_2(2V40)
PURA2_HUMAN
[Raw transfer]



GDP_A_2(2V40)
PURA2_HUMAN
[Raw transfer]



GNH_A_3(1HOO)
PURA_ECOLI
[Raw transfer]



GNH_A_3(1HON)
PURA_ECOLI
[Raw transfer]



IMP_B_7(1IWE)
PURA1_MOUSE
[Raw transfer]



HAD_C_3(1KKB)
PURA_ECOLI
[Raw transfer]



CIT_A_2(3R7T)
PURA_CAMJE
[Raw transfer]
4 PsiBlast_PDB 97.9251% -84 - C8 -1CH8 7.5 PURA_ECOLI
7 PsiBlast_PDB 97.7351% -86 - C8 -1CIB 6.7 PURA_ECOLI
57 Fugue 97.7150% -94 - C8 -1ADE - PURA_ECOLI -
48 HHSearch 97.6750% -91 - C8 -3HID - PURA_YERPE -
15 PsiBlast_PDB 97.6151% -87 - C8 -1GIN 6.8 PURA_ECOLI
25 PsiBlast_CBE 97.5450% -88 - C8 -1CG3 7.5 PURA_ECOLI
5 PsiBlast_PDB 97.4351% -88 - C8 -1QF4 6.9 PURA_ECOLI
58 Fugue 97.4050% -88 * C8 *1QF5 6.3 PURA_ECOLI
18 PsiBlast_PDB 97.4051% -82 - C8 -1JUY 7.9 PURA_ECOLI
8 PsiBlast_PDB 97.1751% -84 - C8 -2GCQ 8.4 PURA_ECOLI
22 PsiBlast_CBE 97.0351% -85 - C8 -1KKF 7.1 PURA_ECOLI
26 PsiBlast_CBE 96.9050% -90 - C8 -3HID - PURA_YERPE -
11 PsiBlast_PDB 96.8151% -92 - C8 -1ADE - PURA_ECOLI -
6 PsiBlast_PDB 96.7351% -88 - C8 -1QF5 6.3 PURA_ECOLI
19 PsiBlast_PDB 96.7151% -85 - C8 -1KJX 5.6 PURA_ECOLI
20 PsiBlast_PDB 96.6651% -83 - C8 -1KKB 6.6 PURA_ECOLI
14 PsiBlast_PDB 96.6251% -83 - C8 -1GIM 8.0 PURA_ECOLI
24 PsiBlast_CBE 96.5850% -85 - C8 -1CG4 7.1 PURA_ECOLI
3 PsiBlast_PDB 96.3551% -85 - C8 -1CG0 7.0 PURA_ECOLI
23 PsiBlast_CBE 96.2550% -86 - C8 -1CG1 7.2 PURA_ECOLI
46 HHSearch 96.2450% -91 - C8 -4M9D 6.6 PURA_BACAN
16 PsiBlast_PDB 95.9351% -89 - C8 -1KSZ 6.2 PURA_ECOLI
17 PsiBlast_PDB 95.9251% -85 - C8 -1NHT 6.8 PURA_ECOLI
13 PsiBlast_PDB 95.7651% -87 - C8 -1HOO 6.9 PURA_ECOLI
21 PsiBlast_CBE 95.7451% -93 - C8 -1HOP 5.9 PURA_ECOLI
1 PsiBlast_PDB 95.6751% -88 - C8 -1HON 6.0 PURA_ECOLI
10 PsiBlast_PDB 95.6651% -88 - C8 -1SOO 5.2 PURA_ECOLI
2 PsiBlast_PDB 95.4851% -94 - C8 -1HOP 5.7 PURA_ECOLI
9 PsiBlast_PDB 95.3151% -87 - C8 -1SON 5.4 PURA_ECOLI
49 HHSearch 91.0844% -85 - C8 -1DJ2 7.0 PURA_ARATH
44 PsiBlast_CBE 90.5639% -86 - C8 -1P9B 7.5 PURA_PLAFA
50 HHSearch 90.4645% -92 - C8 -3R7T 3.6 PURA_CAMJE
51 HHSearch 90.3540% -81 - C8 -1P9B 7.3 PURA_PLAFA
45 HHSearch 89.7143% -95 - C8 -2V40 6.6 PURA2_HUMAN
32 PsiBlast_CBE 89.4144% -81 - C8 -1DJ2 7.0 PURA_ARATH
29 PsiBlast_CBE 89.3946% -81 - C8 -1DJ3 6.7 PURA_WHEAT
30 PsiBlast_CBE 89.3046% -81 - C8 -1DJ3 6.7 PURA_WHEAT
31 PsiBlast_CBE 89.2844% -80 - C8 -1DJ2 6.9 PURA_ARATH
43 PsiBlast_CBE 88.8444% -90 - C8 -2V40 6.6 PURA2_HUMAN
34 PsiBlast_CBE 86.9244% -74 - C8 -1MF1 5.7 PURA1_MOUSE
37 PsiBlast_CBE 86.8344% -75 - C8 -1LOO 6.3 PURA1_MOUSE
40 PsiBlast_CBE 86.6944% -72 - C8 -1LNY 6.8 PURA1_MOUSE
38 PsiBlast_CBE 86.6044% -72 - C8 -1LON 7.1 PURA1_MOUSE
42 PsiBlast_CBE 86.5844% -73 - C8 -1IWE 6.2 PURA1_MOUSE
36 PsiBlast_CBE 86.4144% -71 - C8 -1MEZ 6.7 PURA1_MOUSE
41 PsiBlast_CBE 86.2844% -74 - C8 -1IWE 6.3 PURA1_MOUSE
33 PsiBlast_CBE 86.0044% -72 - C8 -2DGN 7.8 PURA1_MOUSE
39 PsiBlast_CBE 85.9444% -69 - C8 -1LNY 7.4 PURA1_MOUSE
35 PsiBlast_CBE 85.3444% -70 - C8 -1MF0 6.8 PURA1_MOUSE