@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1317c: (2016-04-30 )
MHDDFERCYRAIQSKDARFDGWFVVAVLTTGVYCRPSCPVRPPFARNVRFLPTAAAAQGEGFRACKRCRPDASPGSPEWNVRSDVVARAMRLIADGTVDRDGVSGLAAQLGYTIRQLERLLQAVVGAGPLALARAQRMQTARVLIETTNLPFGDVAFAAGFSSIRQFNDTVRLACDGTPTALRARAAARFESATASAGTVSLRLPVRAPFAFEGVFGHLAATAVPGCEEVRDGAYRRTLRLPWGNGIVSLTPAPDHVRCLLVLDDFRDLMTATARCRRLLDLDADPEAIVEALGADPDLRAVVGKAPGQRIPRTVDEAEFAVRAVLAQQVSTKAASTHAGRLVAAYGRPVHDRHGALTHTFPSIEQLAEIDPGHLAVPKARQRTINALVASLADKSLVLDAGCDWQRARGQLLALPGVGPWTAEVIAMRGLGDPDAFPASDLGLRLAAKKLGLPAQRRALTVHSARWRPWRSYATQHLWTTLEHPVNQWPPQEKIA

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NACID_H_8(3CWU)
3MG2_ECOLI
[Raw transfer]
-
NACID_G_7(3CWS)
3MG2_ECOLI
[Raw transfer]
-
NACID_E_5(3CVT)
3MG2_ECOLI
[Raw transfer]
-
NACID_E_5(3CWS)
3MG2_ECOLI
[Raw transfer]
-
NACID_E_5(3CW7)
3MG2_ECOLI
[Raw transfer]
-
NACID_E_5(3D4V)
3MG2_ECOLI
[Raw transfer]
-
NACID_G_7(3D4V)
3MG2_ECOLI
[Raw transfer]
-
NACID_C_3(3OH9)
3MG2_ECOLI
[Raw transfer]
-
1 PsiBlast_PDB 88.3732% -78 - C2 -3OGD - 3MG2_ECOLI -
46 PsiBlast_CBE 83.9432% -78 - C2 -1MPG - 3MG2_ECOLI -
3 PsiBlast_PDB 83.5332% -73 - C2 -3OH9 3.7 3MG2_ECOLI
4 PsiBlast_PDB 83.3932% -75 - C2 -1MPG - 3MG2_ECOLI -
8 PsiBlast_PDB 83.3032% -76 - C2 -3CVT 3.4 3MG2_ECOLI
31 PsiBlast_CBE 82.6932% -78 - C2 -3CWS - 3MG2_ECOLI -
47 PsiBlast_CBE 82.4732% -79 - C2 -1DIZ - 3MG2_ECOLI -
2 PsiBlast_PDB 82.4632% -73 - C2 -3OH6 - 3MG2_ECOLI -
12 PsiBlast_PDB 82.3932% -78 - C2 -3CWT - 3MG2_ECOLI -
9 PsiBlast_PDB 82.3232% -77 - C2 -3CW7 3.7 3MG2_ECOLI
10 PsiBlast_PDB 82.1832% -77 - C2 -3CWA - 3MG2_ECOLI -
25 PsiBlast_CBE 82.1432% -78 - C2 -3CWU 3.5 3MG2_ECOLI
11 PsiBlast_PDB 82.0832% -75 - C2 -3CWS 3.7 3MG2_ECOLI
7 PsiBlast_PDB 81.8332% -75 - C2 -3CVS - 3MG2_ECOLI -
5 PsiBlast_PDB 81.4332% -76 - C2 -1DIZ - 3MG2_ECOLI -
30 PsiBlast_CBE 81.4232% -77 - C2 -3CWS 5.4 3MG2_ECOLI
6 PsiBlast_PDB 81.3932% -77 - C2 -1PVS - 3MG2_ECOLI -
35 PsiBlast_CBE 81.1032% -75 - C2 -3CWA - 3MG2_ECOLI -
24 PsiBlast_CBE 80.8632% -79 - C2 -3CWU - 3MG2_ECOLI -
38 PsiBlast_CBE 80.8132% -75 - C2 -3CW7 - 3MG2_ECOLI -
14 PsiBlast_PDB 80.5132% -74 - C2 -3D4V 5.1 3MG2_ECOLI
21 PsiBlast_CBE 79.2532% -74 - C2 -3D4V 5.0 3MG2_ECOLI