@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv2334: (2016-05-09 )
MSIAEDITQLIGRTPLVRLRRVTDGAVADIVAKLEFFNPANSVKDRIGVAMLQAAEQAGLIKPDTIILEPTSGNTGIALAMVCAARGYRCVLTMPETMSLERRMLLRAYGAELILTPGADGMSGAIAKAEELAKTDQRYFVPQQFENPANPAIHRVTTAEEVWRDTDGKVDIVVAGVGTGGTITGVAQVIKERKPSARFVAVEPAASPVLSGGQKGPHPIQGIGAGFVPPVLDQDLVDEIITVGNEDALNVARRLAREEGLLVGISSGAATVAALQVARRPENAGKLIVVVLPDFGERYLSTPLFADVAD

Atome Classification :

(70 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

P1T_X_3(5DBH)
CYSK_HAEIN
[Raw transfer]




PDA_A_2(2Q3D)
CYSK_MYCTU
[Raw transfer]




PUS_A_3(3X44)
DCSD_STRLA
[Raw transfer]




PUS_A_3(3X44)
DCSD_STRLA
[Raw transfer]




P1T_A_3(3PC3)
?
[Raw transfer]




P1T_A_3(3PC3)
?
[Raw transfer]




PUS_B_4(3X44)
DCSD_STRLA
[Raw transfer]




AWH_A_3(3ZEI)
CYSK_MYCTU
[Raw transfer]




AA5_A_2(1Z7Y)
CYSK1_ARATH
[Raw transfer]




CIT_A_4(2V03)
CYSM_ECOLI
[Raw transfer]




CYS_A_2(4LMB)
?
[Raw transfer]




MET_B_4(4JBL)
?
[Raw transfer]




ILE_A_3(4IL5)
?
[Raw transfer]




4AT_A_4(2EFY)
?
[Raw transfer]




4AT_B_6(2EFY)
?
[Raw transfer]




PLP_E_5(1D6S)
CYSK_SALTY
[Raw transfer]




PLP_D_4(1D6S)
CYSK_SALTY
[Raw transfer]




CHAIN_C_2(4JBN)
?
[Raw transfer]

-

FGA_B_11(4AIR)
?
[Raw transfer]




PLP_B_10(3BM5)
?
[Raw transfer]




4MV_A_3(2ECO)
?
[Raw transfer]




PLP_A_4(4LMB)
?
[Raw transfer]




PLP_A_4(4LMB)
?
[Raw transfer]




PLP_B_7(4LMA)
?
[Raw transfer]




PLP_A_3(4L0D)
CBS_HUMAN
[Raw transfer]




PLP_B_5(4L0D)
CBS_HUMAN
[Raw transfer]




PLP_A_2(2ECQ)
?
[Raw transfer]




PLP_A_5(2PQM)
?
[Raw transfer]




PLP_D_16(1FCJ)
CYSK_SALTY
[Raw transfer]




PLP_A_5(4LMA)
?
[Raw transfer]




PLP_C_7(3VBE)
?
[Raw transfer]




PLP_A_3(4AEC)
CYSKM_ARATH
[Raw transfer]




PLP_B_4(1OAS)
CYSK_SALTY
[Raw transfer]




PLP_A_3(2EFY)
?
[Raw transfer]




PLP_A_3(1Z7W)
CYSK1_ARATH
[Raw transfer]




PLP_A_9(3BM5)
?
[Raw transfer]




PLP_B_5(4AEC)
CYSKM_ARATH
[Raw transfer]




PLP_A_5(2PQM)
?
[Raw transfer]




PLP_A_3(1VE1)
?
[Raw transfer]




PLP_A_3(4AEC)
CYSKM_ARATH
[Raw transfer]




PLP_B_6(3VBE)
?
[Raw transfer]




PLP_A_3(1Z7W)
CYSK1_ARATH
[Raw transfer]




PLP_B_6(2PQM)
?
[Raw transfer]




PLP_C_14(1FCJ)
CYSK_SALTY
[Raw transfer]




PLP_A_3(1OAS)
CYSK_SALTY
[Raw transfer]




PLP_B_15(1FCJ)
CYSK_SALTY
[Raw transfer]




PLP_A_13(1FCJ)
CYSK_SALTY
[Raw transfer]




PLP_A_3(1OAS)
CYSK_SALTY
[Raw transfer]




PLP_A_3(1VE1)
?
[Raw transfer]




PLP_A_2(2ECO)
?
[Raw transfer]




PLP_A_5(3VBE)
?
[Raw transfer]




PLP_A_4(4PCU)
CBS_HUMAN
[Raw transfer]




PLP_A_5(4COO)
CBS_HUMAN
[Raw transfer]




PLP_B_5(2EFY)
?
[Raw transfer]




PLP_A_5(4COO)
CBS_HUMAN
[Raw transfer]




PLP_B_18(4COO)
CBS_HUMAN
[Raw transfer]




PLP_B_7(4PCU)
CBS_HUMAN
[Raw transfer]




MPD_A_6(2Q3B)
CYSK_MYCTU
[Raw transfer]




MPD_A_6(2Q3B)
CYSK_MYCTU
[Raw transfer]




OAS_X_3(4ZU6)
CYSK_HAEIN
[Raw transfer]




PLP_A_2(5D84)
SBNA_STAAE
[Raw transfer]




PLP_A_4(3DWG)
CYSM_MYCTU
[Raw transfer]




PLP_D_8(3VBE)
?
[Raw transfer]




FGA_B_12(4AIR)
?
[Raw transfer]




CYS_A_3(4LMB)
?
[Raw transfer]




3HL_A_3(2ECQ)
?
[Raw transfer]




CHAIN_P_3(1Y7L)
CYSK_HAEIN
[Raw transfer]

-

OAS_B_3(5HBG)
CYSM_HELPY
[Raw transfer]




FGA_B_9(4AIR)
?
[Raw transfer]




PLP_X_4(4ZU6)
CYSK_HAEIN
[Raw transfer]




CHAIN_B_2(3TBH)
?
[Raw transfer]

-

CHAIN_B_2(3TBH)
?
[Raw transfer]

-

CHAIN_B_2(3T4P)
?
[Raw transfer]

-

CHAIN_B_3(2ISQ)
CYSK1_ARATH
[Raw transfer]

-

2 PsiBlast_PDB 95.87100% -95 - C3 -2Q3D 8.2 CYSK_MYCTU
1 PsiBlast_PDB 94.99100%-103 - C3 -3ZEI 6.4 CYSK_MYCTU
3 PsiBlast_PDB 94.8799%-100 - C3 -2Q3B 3.0 CYSK_MYCTU
116 HHSearch 94.2698%-100 - C3 -2Q3B 3.0 CYSK_MYCTU
5 PsiBlast_PDB 88.8785%-107 - C3 -3RR2 - ? -
7 PsiBlast_PDB 85.1764% -94 - C3 -4LMA 4.2 ?
21 PsiBlast_CBE 85.0384%-114 - C3 -4I1Y - ? -
8 PsiBlast_PDB 84.7166% -86 - C3 -4LMB 4.2 ?
22 PsiBlast_CBE 84.3464% -91 - C3 -4LMA 4.5 ?
6 PsiBlast_PDB 84.1384%-111 - C3 -4I1Y - ? -
23 PsiBlast_CBE 84.0758% -96 - C3 -4AEC 4.1 CYSKM_ARATH
112 HHSearch 83.2859% -96 - C3 -4AEC 3.9 CYSKM_ARATH
114 HHSearch 83.2456% -96 - C3 -1Z7W 4.5 CYSK1_ARATH
9 PsiBlast_PDB 83.1258% -95 - C3 -4AEC 3.9 CYSKM_ARATH
30 PsiBlast_CBE 83.0152% -86 - C3 -3VC3 - ? -
119 HHSearch 82.9966% -85 - C3 -4LMB 4.2 ?
11 PsiBlast_PDB 82.9058% -98 - C3 -2ISQ 8.2 CYSK1_ARATH
4 PsiBlast_PDB 82.8599% -40 - C- -2Q3C - CYSK_MYCTU -
123 HHSearch 82.7652% -93 - C3 -3TBH 4.9 ?
12 PsiBlast_PDB 82.6657% -96 - C3 -1Z7Y 3.7 CYSK1_ARATH
16 PsiBlast_PDB 82.5155% -95 - C3 -1OAS 4.0 CYSK_SALTY
14 PsiBlast_PDB 82.4952% -93 - C3 -3VBE 4.0 ?
18 PsiBlast_PDB 82.4555% -87 - C3 -1D6S 5.1 CYSK_SALTY
10 PsiBlast_PDB 82.4458% -97 - C3 -1Z7W 4.5 CYSK1_ARATH
48 PsiBlast_CBE 82.4150% -92 - C3 -3TBH 4.9 ?
32 PsiBlast_CBE 82.1755% -96 - C3 -1OAS 4.2 CYSK_SALTY
25 PsiBlast_CBE 82.1652% -92 - C3 -3VBE 3.9 ?
26 PsiBlast_CBE 82.0852% -91 - C3 -3VBE 4.5 ?
36 PsiBlast_CBE 81.9655% -87 - C3 -1D6S 4.9 CYSK_SALTY
102 Fugue 81.6657% -93 - C3 -1OAS 4.0 CYSK_SALTY
24 PsiBlast_CBE 81.5552% -91 - C3 -3VBE 4.5 ?
49 PsiBlast_CBE 81.3550% -94 - C3 -3T4P 6.7 ?
52 PsiBlast_CBE 81.2656% -86 - C3 -5DBH 7.7 CYSK_HAEIN
129 HHSearch 81.2251% -92 * C3 *1VE1 3.9 ?
20 PsiBlast_PDB 81.1350% -98 - C3 -2PQM 4.0 ?
38 PsiBlast_CBE 80.9750%-100 - C3 -2PQM 3.7 ?
55 PsiBlast_CBE 80.9450% -94 - C3 -2EFY 3.4 ?
58 PsiBlast_CBE 80.9050% -91 - C3 -1VE1 3.9 ?
39 PsiBlast_CBE 80.8850% -97 - C3 -4JBN 3.2 ?
35 PsiBlast_CBE 80.6755% -92 - C3 -1FCJ 3.5 CYSK_SALTY
57 PsiBlast_CBE 80.6550% -93 - C3 -2ECO 4.4 ?
33 PsiBlast_CBE 80.6355% -94 - C3 -1FCJ 3.7 CYSK_SALTY
128 HHSearch 80.5650% -97 - C3 -2PQM 4.0 ?
56 PsiBlast_CBE 80.5650% -90 - C3 -2ECQ 4.1 ?
122 HHSearch 80.5557% -94 - C3 -1Y7L 5.8 CYSK_HAEIN
37 PsiBlast_CBE 80.3550% -89 - C3 -3BM5 2.8 ?
19 PsiBlast_PDB 80.3350% -98 - C3 -3BM5 4.6 ?
41 PsiBlast_CBE 80.1350% -96 - C3 -4IL5 3.3 ?
34 PsiBlast_CBE 79.9955% -91 - C3 -1FCJ 3.2 CYSK_SALTY
17 PsiBlast_PDB 79.7655% -92 - C3 -1FCJ 3.8 CYSK_SALTY
42 PsiBlast_CBE 79.7150% -89 - C3 -4JBL 4.0 ?
54 PsiBlast_CBE 79.1050% -91 - C3 -2EFY 3.3 ?
113 HHSearch 78.5547% -86 - C3 -3X44 7.4 DCSD_STRLA
68 PsiBlast_CBE 78.4847% -90 - C3 -3X44 7.4 DCSD_STRLA
67 PsiBlast_CBE 78.3747% -91 - C3 -3X44 4.0 DCSD_STRLA
101 Fugue 76.4743% -79 - C3 -3PC3 8.4 ?
91 PsiBlast_CBE 76.3941% -80 - C3 -4COO 4.6 CBS_HUMAN
94 PsiBlast_CBE 75.9240% -81 - C3 -4L0D 4.0 CBS_HUMAN
51 PsiBlast_CBE 75.5850%-101 - C3 -4AIR 3.4 ?
78 PsiBlast_CBE 75.4541% -84 - C3 -4PCU 3.5 CBS_HUMAN
92 PsiBlast_CBE 75.0841% -78 - C3 -4COO 4.6 CBS_HUMAN
93 PsiBlast_CBE 75.0740% -82 - C3 -4L0D 3.7 CBS_HUMAN
127 HHSearch 75.0242% -91 - C3 -2V03 3.2 CYSM_ECOLI
79 PsiBlast_CBE 74.7341% -84 - C3 -4PCU 3.0 CBS_HUMAN
131 HHSearch 74.4341% -77 - C3 -4COO 4.6 CBS_HUMAN
124 HHSearch 74.4339% -85 - C3 -3DWG 3.9 CYSM_MYCTU
126 HHSearch 74.0842% -80 - C3 -3PC3 8.5 ?
121 HHSearch 71.9731% -88 - C3 -5D84 3.6 SBNA_STAAE
69 PsiBlast_CBE 59.1542% -42 - C3 -5HBG 2.2 CYSM_HELPY
53 PsiBlast_CBE 52.6156% -3 - C3 -4ZU6 3.9 CYSK_HAEIN