@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv2921c: (2016-05-14 )
MWEGLWIATAVIAALVVIAALTLGLVLYRRRRISLSPRPERGVVDRSGGYTASSGITFSQTPTTQPAERIDTSGLPAVGDDATVPRDAPKRTIADVHLPEFEPEPQAPEVPEADAIAPPEGRLERLRGRLARSQNALGRGLLGLIGGGDLDEDSWQDVEDTLLVADLGPAATASVVSQLRSRLASGNVRTEADARAVLRDVLINELQPGMDRSIRALPHAGHPSVLLVVGVNGTGKTTTVGKLARVLVADGRRVVLGAADTFRAAAADQLQTWAARVGAAVVRGPEGADPASVAFDAVDKGIAAGADVVLIDTAGRLHTKVGLMDELDKVKRVVTRRASVDEVLLVLDATIGQNGLAQARVFAEVVDISGAVLTKLDGTAKGGIVFRVQQELGVPVKLVGLGEGPDDLAPFEPAAFVDALLG

Atome Classification :

(47 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EDO_A_6(2J7P)
FTSY_THEAQ
[Raw transfer]




GCP_D_17(1OKK)
FTSY_THEAQ
[Raw transfer]




GDP_B_11(4C7O)
FTSY_ECOLI
[Raw transfer]




GDP_B_17(3DM5)
SRP54_PYRFU
[Raw transfer]




GCP_B_6(1RJ9)
SRP54_THEAQ
[Raw transfer]




GDP_A_6(1O87)
SRP54_THEAQ
[Raw transfer]




GDP_A_16(3DM5)
SRP54_PYRFU
[Raw transfer]




GDP_A_16(3DM5)
SRP54_PYRFU
[Raw transfer]




GNP_A_12(2J7P)
SRP54_THEAQ
[Raw transfer]




GNP_B_20(2J7P)
SRP54_THEAQ
[Raw transfer]




GNP_B_20(2J7P)
FTSY_THEAQ
[Raw transfer]




GCP_A_3(1OKK)
FTSY_THEAQ
[Raw transfer]




GDP_C_14(4C7O)
FTSY_ECOLI
[Raw transfer]




GCP_B_6(1RJ9)
FTSY_THEAQ
[Raw transfer]




GCP_B_6(1RJ9)
FTSY_THEAQ
[Raw transfer]




GNP_A_6(1JPN)
SRP54_THEAQ
[Raw transfer]




GNP_B_5(1JPN)
SRP54_THEAQ
[Raw transfer]




GOL_B_14(3DMD)
?
[Raw transfer]




GNP_B_2(1JPJ)
SRP54_THEAQ
[Raw transfer]




GDP_A_8(4C7O)
FTSY_ECOLI
[Raw transfer]




GNP_A_12(2J7P)
FTSY_THEAQ
[Raw transfer]




GOL_C_16(3DMD)
?
[Raw transfer]




GDP_B_2(2NG1)
SRP54_THEAQ
[Raw transfer]




CIT_B_4(1VMA)
?
[Raw transfer]




GDP_D_2(2IYL)
FTSY_THEAQ
[Raw transfer]




GCP_D_17(1OKK)
SRP54_THEAQ
[Raw transfer]




FMT_A_5(1O87)
SRP54_THEAQ
[Raw transfer]




GDP_B_12(1O87)
SRP54_THEAQ
[Raw transfer]




GDP_B_11(4C7O)
SRP54_ECOLI
[Raw transfer]




GDP_B_11(4C7O)
SRP54_ECOLI
[Raw transfer]




GDP_A_7(1NG1)
SRP54_THEAQ
[Raw transfer]




GDP_C_2(3E70)
?
[Raw transfer]




FMT_B_11(1O87)
SRP54_THEAQ
[Raw transfer]




OXY_A_3(1LS1)
SRP54_THEAQ
[Raw transfer]




OXY_A_3(1LS1)
SRP54_THEAQ
[Raw transfer]




EDO_A_6(2J7P)
SRP54_THEAQ
[Raw transfer]




EDO_A_2(2YHS)
FTSY_ECOLI
[Raw transfer]




GDP_D_18(4C7O)
FTSY_ECOLI
[Raw transfer]




EDO_B_14(3NG1)
SRP54_THEAQ
[Raw transfer]




EDO_A_12(3NG1)
SRP54_THEAQ
[Raw transfer]




ACY_B_7(1JPN)
SRP54_THEAQ
[Raw transfer]




ACY_A_9(1JPN)
SRP54_THEAQ
[Raw transfer]




GDP_D_18(4C7O)
SRP54_ECOLI
[Raw transfer]




116 HHSearch 87.2241%-112 - C6 -2OG2 - CFTSY_ARATH -
128 HHSearch 86.9148%-108 - C6 -1VMA - ? -
21 PsiBlast_CBE 86.6446%-109 - C6 -1VMA 3.9 ?
1 PsiBlast_PDB 86.2146%-107 - C6 -1VMA - ? -
120 HHSearch 86.0241%-107 - C6 -3B9Q - CFTSY_ARATH -
3 PsiBlast_PDB 85.7545%-114 - C6 -2OG2 - CFTSY_ARATH -
2 PsiBlast_PDB 85.2345%-112 - C6 -3B9Q - CFTSY_ARATH -
117 HHSearch 84.5541%-104 - C6 -2YHS 2.5 FTSY_ECOLI
17 PsiBlast_PDB 83.7347%-126 - C6 -2IYL 7.0 FTSY_THEAQ
131 HHSearch 83.5347%-113 - C6 -1RJ9 2.5 FTSY_THEAQ
15 PsiBlast_PDB 82.8147%-114 - C6 -2J7P 2.6 FTSY_THEAQ
23 PsiBlast_CBE 82.7047%-118 - C6 -2Q9C - FTSY_THEAQ -
25 PsiBlast_CBE 82.6947%-116 - C6 -2Q9A - FTSY_THEAQ -
5 PsiBlast_PDB 82.6345%-109 - C6 -4AK9 - ? -
26 PsiBlast_CBE 82.6147%-114 - C6 -2J7P 2.7 FTSY_THEAQ
4 PsiBlast_PDB 82.5140%-101 - C6 -2YHS - FTSY_ECOLI -
28 PsiBlast_CBE 82.3347%-110 - C6 -2CNW - FTSY_THEAQ -
16 PsiBlast_PDB 82.2947%-107 - C6 -2CNW - FTSY_THEAQ -
18 PsiBlast_PDB 81.8847%-111 - C6 -1RJ9 2.5 FTSY_THEAQ
27 PsiBlast_CBE 81.5147%-111 - C6 -2CNW - FTSY_THEAQ -
13 PsiBlast_PDB 81.5047%-115 - C6 -1OKK 9.1 FTSY_THEAQ
29 PsiBlast_CBE 80.1742%-103 - C6 -4C7O 4.0 FTSY_ECOLI
49 PsiBlast_CBE 79.9635% -99 - C6 -2J7P 9.4 SRP54_THEAQ
19 PsiBlast_PDB 79.5942%-102 - C6 -4C7O 7.0 FTSY_ECOLI
53 PsiBlast_CBE 79.3335% -99 - C6 -1OKK 2.4 SRP54_THEAQ
48 PsiBlast_CBE 79.3135%-104 - C6 -2J7P 9.2 SRP54_THEAQ
46 PsiBlast_CBE 77.9435%-101 - C6 -3NG1 3.7 SRP54_THEAQ
47 PsiBlast_CBE 77.9035%-101 - C6 -3NG1 3.7 SRP54_THEAQ
67 PsiBlast_CBE 77.5635% -97 - C6 -1O87 7.1 SRP54_THEAQ
125 HHSearch 77.1733%-105 - C6 -3DM5 7.6 SRP54_PYRFU
68 PsiBlast_CBE 77.0935% -98 - C6 -1O87 7.2 SRP54_THEAQ
38 PsiBlast_CBE 77.0835% -98 - C6 -2NG1 6.3 SRP54_THEAQ
31 PsiBlast_CBE 76.9738%-106 - C6 -3DMD 3.4 ?
30 PsiBlast_CBE 76.6738%-107 - C6 -3DMD 2.2 ?
59 PsiBlast_CBE 76.6535% -96 - C6 -1JPN 7.3 SRP54_THEAQ
60 PsiBlast_CBE 76.5135% -98 - C6 -1JPJ 7.3 SRP54_THEAQ
54 PsiBlast_CBE 76.4635% -96 - C6 -1NG1 7.4 SRP54_THEAQ
39 PsiBlast_CBE 76.0735%-100 - C6 -1RJ9 9.4 SRP54_THEAQ
55 PsiBlast_CBE 75.9835%-104 - C6 -1LS1 3.1 SRP54_THEAQ
124 HHSearch 75.8839%-101 * C6 *3E70 7.1 ?
58 PsiBlast_CBE 75.8535% -95 - C6 -1JPN 6.5 SRP54_THEAQ
44 PsiBlast_CBE 75.3932% -92 - C6 -4C7O 3.2 SRP54_ECOLI
45 PsiBlast_CBE 75.2432% -93 - C6 -4C7O 2.7 SRP54_ECOLI
127 HHSearch 74.8536%-106 - C6 -1LS1 3.1 SRP54_THEAQ
34 PsiBlast_CBE 73.9832%-101 - C6 -3DM5 7.5 SRP54_PYRFU
118 HHSearch 73.5731% -94 - C6 -4C7O 2.7 SRP54_ECOLI
33 PsiBlast_CBE 72.1232%-101 - C6 -3DM5 6.9 SRP54_PYRFU