@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3801c: (2016-05-23 )
MFVTGESGMAYHNPFIVNGKIRFPANTNLVRHVEKWAKVRGDKLAYRFLDFSTERDGVARDILWSDFSARNRAVGARLQQVTQPGDRVAILCPQNLDYLISFFGALYSGRIAVPLFDPAEPGHVGRLHAVLDDCAPSTILTTTDSAEGVRKFIRARSAKERPRVIAVDAVPTEVAATWQQPEANEETVAYLQYTSGSTRIPSGVQITHLNLPTNVVQVLNALEGQEGDRGVSWLPFFHDMGLITVLLASVLGHSFTFMTPAAFVRRPGRWIRELARKPGETGGTFSAAPNFAFEHAAVRGVPRDDEPPLDLSNVKGILNGSEPVSPASMRKFFEAFAPYGLKQTAVKPSYGLAEATLFVSTTPMDEVPTVIHVDRDELNNQRFVEVAADAPNAVAQVSAGKVGVSEWAVIVDADTASELPDGQIGEIWLHGNNLGTGYWGKEEESAQTFKNILKSRISESRAEGAPDDALWVRTGDYGTYFKDHLYIAGRIKDLVIIDGRNHYPQDLECTAQESTKALRVGYAAAFSVPANQLPQTVFDDSHAGLKFDPEDTSEQLVIVGERAAGTHKLDHQPIVDDIRAAIAVGHGVTVRDVLLVSAGTIPRTSSGKIGRRACRAAYLDGSLRSGVGSPTVFATSD

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

5SV_A_3(5EY9)
FAA32_MYCMM
[Raw transfer]



5SV_A_3(5EY9)
FAA32_MYCMM
[Raw transfer]



5SV_B_8(5EY9)
FAA32_MYCMM
[Raw transfer]



PBK_A_3(3PBK)
?
[Raw transfer]



ATP_A_4(5D6J)
?
[Raw transfer]



ATP_A_4(5D6J)
?
[Raw transfer]



1ZZ_A_2(3KXW)
?
[Raw transfer]



1ZZ_A_2(3KXW)
?
[Raw transfer]
61 Fugue 98.0593% -91 - C4 -5EY9 9.7 FAA32_MYCMM
1 PsiBlast_PDB 98.0593% -91 - C4 -5EY9 9.7 FAA32_MYCMM
21 PsiBlast_CBE 97.6693% -90 - C4 -5EY9 9.3 FAA32_MYCMM
3 PsiBlast_PDB 94.0175% -90 - C4 -5D6J 9.3 ?
37 HHSearch 93.8276% -89 - C4 -5D6J 9.3 ?
23 PsiBlast_CBE 93.7375% -91 - C4 -5EY8 - ? -
26 PsiBlast_CBE 93.1675% -90 - C4 -5EY8 - ? -
25 PsiBlast_CBE 92.7275% -89 - C4 -5EY8 - ? -
4 PsiBlast_PDB 92.4775% -87 - C4 -5ICR - ? -
24 PsiBlast_CBE 92.4175% -91 - C4 -5EY8 - ? -
2 PsiBlast_PDB 91.8875% -90 - C4 -5EY8 - ? -
27 PsiBlast_CBE 91.8075% -94 - C4 -5EY8 - ? -
22 PsiBlast_CBE 91.5975% -91 - C4 -5EY8 - ? -
5 PsiBlast_PDB 83.3974% -88 - C4 -5D6N - ? -
54 HHSearch 73.1230% -80 - C4 -3KXW 5.9 ?
7 PsiBlast_PDB 69.9529% -80 - C4 -3KXW 5.9 ?
8 PsiBlast_PDB 69.3130% -73 - C4 -3PBK 6.5 ?
6 PsiBlast_PDB 67.5036% -81 - C4 -3T5A - FAA28_MYCTU -
9 PsiBlast_PDB 65.9024% -69 - C4 -4R0M - ? -
65 Fugue 63.4017% -60 - C4 -1PG4 - ACSA_SALTY -