@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA1334: (2016-01-28 )
MLFSPYTLGHLTLPNRIVMPPMTRSRAASGEVATALMAEYYSQRAGAGLIVSEGTQISRQGQGYAWTPGIHSAEQVAGWRQVTDAVHAAGGRIFAQLWHVGRVSHTSLQPGNAAPVSSSALVAEGVKVFVDPQGRGAQAGGGEMVQHSAPRALAVEEIREIVADYAQAARNALDAGFDGVELHGANGYLINQFIDSQANARNDQYGGSLENRLRFLREVAEAVTAVVGRERIGVRLAPLTTLQGAVDDTPQATYLAAARLLDEIGVAYIHIAEADWEDAPAMPAAFKEALRIVYRGSLIYSGMYTKARAEEALARGWADLVGFGRPFIANPDLPYRLEHDLALADGDRSTYFGGGAAGYTDYPSLPQAAG

Atome Classification :

(58 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FMN_B_6(2HSA)
OPR3_SOLLC
[Raw transfer]




FMN_B_4(1Q45)
OPR3_ARATH
[Raw transfer]




FMN_A_3(1Q45)
OPR3_ARATH
[Raw transfer]




FMN_B_6(2HSA)
OPR3_SOLLC
[Raw transfer]




FMN_C_3(1ICQ)
OPR1_SOLLC
[Raw transfer]




FMN_D_4(1ICQ)
OPR1_SOLLC
[Raw transfer]




FMN_A_6(1ICP)
OPR1_SOLLC
[Raw transfer]




FMN_A_3(4AB4)
?
[Raw transfer]




FMN_A_3(4AEO)
?
[Raw transfer]




FMN_B_10(4AB4)
?
[Raw transfer]




FMN_A_3(2Q3O)
OPR3_ARATH
[Raw transfer]




FMN_A_3(3HGO)
OPR3_SOLLC
[Raw transfer]




FMN_D_4(2HS8)
OPR3_SOLLC
[Raw transfer]




FMN_B_4(3HGO)
OPR3_SOLLC
[Raw transfer]




FMN_B_5(2G5W)
OPR3_ARATH
[Raw transfer]




FMN_C_3(1ICS)
OPR1_SOLLC
[Raw transfer]




FMN_D_4(1ICS)
OPR1_SOLLC
[Raw transfer]




FMN_C_3(2HS8)
OPR3_SOLLC
[Raw transfer]




FMN_B_5(3HGS)
OPR3_SOLLC
[Raw transfer]




FMN_A_3(3GKA)
?
[Raw transfer]




FMN_A_3(3HGR)
OPR1_SOLLC
[Raw transfer]




FMN_A_3(2HS6)
OPR3_SOLLC
[Raw transfer]




FMN_A_2(1VJI)
OPR1_ARATH
[Raw transfer]




FMN_A_7(2HSA)
OPR3_SOLLC
[Raw transfer]




FMN_A_3(3GKA)
?
[Raw transfer]




FMN_B_5(3HGR)
OPR1_SOLLC
[Raw transfer]




FMN_A_2(2Q3R)
OPR1_ARATH
[Raw transfer]




FMN_A_3(3HGS)
OPR3_SOLLC
[Raw transfer]




FMN_B_5(2HS6)
OPR3_SOLLC
[Raw transfer]




FMN_A_3(2G5W)
OPR3_ARATH
[Raw transfer]




FMN_A_3(4A3U)
?
[Raw transfer]




FMN_B_4(2Q3O)
OPR3_ARATH
[Raw transfer]




FMN_B_4(3GKA)
?
[Raw transfer]




NCA_B_10(4A3U)
?
[Raw transfer]




TNL_B_10(4AEO)
?
[Raw transfer]




3RN_A_4(3TX9)
OYE1_SACPS
[Raw transfer]




GOL_A_4(4E2B)
?
[Raw transfer]




TXD_A_3(2R14)
?
[Raw transfer]




8PG_B_6(2G5W)
OPR3_ARATH
[Raw transfer]




PGE_A_2(3WJS)
?
[Raw transfer]




1 PsiBlast_PDB 97.3862% -85 - C6 -2GOU - ? -
2 PsiBlast_PDB 97.3462% -85 - C6 -2GQ8 - ? -
4 PsiBlast_PDB 97.0462% -84 - C6 -2GQA - ? -
3 PsiBlast_PDB 96.9262% -86 - C6 -2GQ9 - ? -
7 PsiBlast_PDB 96.5961% -85 - C6 -4AWU - ? -
10 PsiBlast_PDB 92.9450% -90 - C6 -3GX9 - ? -
11 PsiBlast_PDB 92.6647% -78 - C6 -3P82 - ? -
8 PsiBlast_PDB 92.6350% -87 - C6 -2R14 - ? -
115 HHSearch 92.4451% -89 - C6 -2R14 5.0 ?
31 PsiBlast_CBE 92.0247% -80 - C6 -2ABB - ? -
9 PsiBlast_PDB 91.8150% -82 - C6 -1GWJ - ? -
17 PsiBlast_PDB 91.7347% -79 - C6 -1H50 - ? -
13 PsiBlast_PDB 91.6547% -80 - C6 -3P62 - ? -
26 PsiBlast_CBE 91.6347% -79 - C6 -1H51 - ? -
24 PsiBlast_CBE 91.6347% -79 - C6 -2ABA - ? -
20 PsiBlast_PDB 91.6147% -77 - C6 -1H62 - ? -
41 PsiBlast_CBE 91.5447% -79 - C6 -1VYS - ? -
12 PsiBlast_PDB 91.5447% -81 - C6 -3P8I - ? -
25 PsiBlast_CBE 91.5147% -79 - C6 -1H63 - ? -
19 PsiBlast_PDB 91.5047% -77 - C6 -1H61 - ? -
51 PsiBlast_CBE 89.2742% -87 - C6 -1VJI 10.6 OPR1_ARATH
117 HHSearch 89.2043% -84 - C6 -2HSA 10.4 OPR3_SOLLC
50 PsiBlast_CBE 89.1342% -90 - C6 -2Q3R 7.8 OPR1_ARATH
44 PsiBlast_CBE 88.5650% -82 - C6 -4AEO 6.6 ?
46 PsiBlast_CBE 88.2350% -83 - C6 -4AB4 6.5 ?
59 PsiBlast_CBE 88.2241% -84 - C6 -1Q45 10.5 OPR3_ARATH
58 PsiBlast_CBE 88.1741% -83 - C6 -1Q45 9.8 OPR3_ARATH
48 PsiBlast_CBE 87.8947% -80 - C6 -3GKA 6.9 ?
63 PsiBlast_CBE 87.8741% -84 - C6 -2HS8 9.6 OPR3_SOLLC
111 HHSearch 87.8148% -80 - C6 -3GKA 7.3 ?
45 PsiBlast_CBE 87.8150% -82 - C6 -4AB4 7.0 ?
49 PsiBlast_CBE 87.8047% -81 - C6 -3GKA 7.5 ?
43 PsiBlast_CBE 87.7550% -81 - C6 -4AEO 3.8 ?
57 PsiBlast_CBE 87.6341% -87 - C6 -2G5W 9.5 OPR3_ARATH
66 PsiBlast_CBE 87.6041% -83 - C6 -2HSA 10.4 OPR3_SOLLC
56 PsiBlast_CBE 87.5241% -82 - C6 -2G5W 9.1 OPR3_ARATH
74 PsiBlast_CBE 87.4940% -81 - C6 -1ICQ 9.8 OPR1_SOLLC
61 PsiBlast_CBE 87.4941% -84 - C6 -3HGO 9.5 OPR3_SOLLC
55 PsiBlast_CBE 87.4141% -86 - C6 -2Q3O 7.8 OPR3_ARATH
67 PsiBlast_CBE 87.1941% -81 - C6 -2HSA 11.1 OPR3_SOLLC
62 PsiBlast_CBE 87.1641% -86 - C6 -2HS8 10.1 OPR3_SOLLC
114 HHSearch 87.1541% -83 * C6 *1ICP 10.1 OPR1_SOLLC
75 PsiBlast_CBE 87.0240% -80 - C6 -1ICQ 9.9 OPR1_SOLLC
73 PsiBlast_CBE 87.0040% -82 - C6 -1ICS 10.3 OPR1_SOLLC
52 PsiBlast_CBE 86.9142% -84 - C6 -4A3U 3.0 ?
68 PsiBlast_CBE 86.8741% -82 - C6 -2HS6 10.3 OPR3_SOLLC
64 PsiBlast_CBE 86.7441% -83 - C6 -3HGS 10.3 OPR3_SOLLC
60 PsiBlast_CBE 86.7441% -83 - C6 -3HGO 10.3 OPR3_SOLLC
54 PsiBlast_CBE 86.5941% -83 - C6 -2Q3O 6.6 OPR3_ARATH
71 PsiBlast_CBE 86.5340% -81 - C6 -3HGR 10.3 OPR1_SOLLC
65 PsiBlast_CBE 86.5341% -82 - C6 -3HGS 10.8 OPR3_SOLLC
69 PsiBlast_CBE 86.5141% -82 - C6 -2HS6 10.4 OPR3_SOLLC
70 PsiBlast_CBE 86.4040% -82 - C6 -3HGR 10.0 OPR1_SOLLC
72 PsiBlast_CBE 86.3840% -82 - C6 -1ICS 10.0 OPR1_SOLLC
53 PsiBlast_CBE 86.2842% -82 - C6 -4A3U 8.8 ?
85 PsiBlast_CBE 81.9935% -77 - C6 -4E2B 3.1 ?
92 PsiBlast_CBE 81.2635% -73 - C6 -3TX9 2.9 OYE1_SACPS
47 PsiBlast_CBE 80.9744% -85 - C6 -3WJS 2.5 ?