@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA2104: (2016-02-04 )
MIYDSLLDLIGGTPVIRLSKLSARLGVSVFAKLESFNPGGSHKARIALWMILDAERKGILVRGKGQTILEPSGGNTGIGLAMAGNILGYRVSLVVPDNYSPDKRQLLELYGAHVVLSDSRKGNNSHGELAIQILLEHPEFVMLNQQRNPANPQAHREATALEILRDFAGQPPPDFFFAGIGTGGHITGVGEVLRNHWPDMAIYGVQPEQCDLLDDRHASHEIQGLSIGIVPEVCNLGIVTGMVGVSKSACLSMIREVLQNDSVSMGLSSAANLVAVLNMASAMPSGARVLTMIYDGVESYMDAFR

Atome Classification :

(47 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

KOU_A_3(3PC4)
?
[Raw transfer]




PUS_B_4(3X44)
?
[Raw transfer]




PUS_A_3(3X44)
?
[Raw transfer]




PUS_A_3(3X44)
?
[Raw transfer]




P1T_A_3(3PC3)
?
[Raw transfer]




P1T_A_3(3PC3)
?
[Raw transfer]




P1T_A_3(3PC3)
?
[Raw transfer]




PDA_A_2(2Q3D)
CYSK_MYCTU
[Raw transfer]




AA5_A_2(1Z7Y)
CYSK1_ARATH
[Raw transfer]




PLP_A_3(1OAS)
CYSK_SALTY
[Raw transfer]




PLP_A_2(2ECO)
?
[Raw transfer]




PLP_B_18(4COO)
CBS_HUMAN
[Raw transfer]




PLP_B_5(4L0D)
CBS_HUMAN
[Raw transfer]




PLP_A_3(1VE1)
?
[Raw transfer]




PLP_B_5(4AEC)
CYSKM_ARATH
[Raw transfer]




PLP_A_5(4COO)
CBS_HUMAN
[Raw transfer]




PLP_A_3(2EFY)
?
[Raw transfer]




PLP_B_5(2EFY)
?
[Raw transfer]




PLP_A_3(3PC2)
?
[Raw transfer]




PLP_A_3(1VE1)
?
[Raw transfer]




PLP_A_3(4AEC)
CYSKM_ARATH
[Raw transfer]




PLP_B_7(4LMA)
?
[Raw transfer]




PLP_A_2(2ECQ)
?
[Raw transfer]




PLP_A_5(4LMA)
?
[Raw transfer]




PLP_A_3(1Z7W)
CYSK1_ARATH
[Raw transfer]




PLP_A_2(3ZEI)
CYSK_MYCTU
[Raw transfer]




PLP_A_3(4L0D)
CBS_HUMAN
[Raw transfer]




PLP_B_7(4PCU)
CBS_HUMAN
[Raw transfer]




PLP_A_3(1Z7W)
CYSK1_ARATH
[Raw transfer]




PLP_A_4(4PCU)
CBS_HUMAN
[Raw transfer]




PLP_A_4(4LMB)
?
[Raw transfer]




PLP_A_7(2ISQ)
CYSK1_ARATH
[Raw transfer]




PLP_A_7(2BHS)
CYSM_ECOLI
[Raw transfer]




4AT_A_4(2EFY)
?
[Raw transfer]




4AT_B_6(2EFY)
?
[Raw transfer]




4MV_A_3(2ECO)
?
[Raw transfer]




3HL_A_3(2ECQ)
?
[Raw transfer]




MPD_A_6(2Q3B)
CYSK_MYCTU
[Raw transfer]




52 PsiBlast_CBE 93.9938%-102 - C3 -3X43 - ? -
48 PsiBlast_CBE 92.6838% -99 - C3 -3X43 - ? -
53 PsiBlast_CBE 92.6138% -99 - C3 -3X43 - ? -
51 PsiBlast_CBE 92.5838% -98 - C3 -3X43 - ? -
12 PsiBlast_PDB 91.8939%-118 - C3 -2EGU - ? -
50 PsiBlast_CBE 91.7838% -99 - C3 -3X43 - ? -
47 PsiBlast_CBE 91.5238% -99 - C3 -3X43 - ? -
10 PsiBlast_PDB 91.0438% -95 - C3 -3X43 - ? -
49 PsiBlast_CBE 91.0138% -98 - C3 -3X43 - ? -
102 HHSearch 90.6138%-120 - C3 -2EGU - ? -
17 PsiBlast_PDB 90.4733%-101 - C3 -3PC2 4.4 ?
37 PsiBlast_CBE 90.3633%-100 - C3 -4L27 - CBS_HUMAN -
43 PsiBlast_CBE 90.1733%-109 - C3 -1JBQ - CBS_HUMAN -
35 PsiBlast_CBE 89.7933% -99 - C3 -4COO 4.3 CBS_HUMAN
9 PsiBlast_PDB 89.7433%-107 - C3 -1JBQ - CBS_HUMAN -
11 PsiBlast_PDB 89.6138% -89 - C3 -3X44 5.2 ?
114 HHSearch 89.6034% -93 - C3 -3PC3 8.0 ?
6 PsiBlast_PDB 89.5633% -98 - C3 -4COO 4.4 CBS_HUMAN
109 HHSearch 89.4537% -94 - C3 -1VE1 3.1 ?
31 PsiBlast_CBE 89.3533%-104 - C3 -4PCU 2.7 CBS_HUMAN
32 PsiBlast_CBE 89.0233%-100 - C3 -4L0D 3.3 CBS_HUMAN
14 PsiBlast_PDB 88.8637% -93 - C3 -2ECO 3.0 ?
3 PsiBlast_PDB 88.7733%-105 - C3 -4PCU 2.7 CBS_HUMAN
16 PsiBlast_PDB 88.5737% -96 - C3 -2EFY 3.6 ?
15 PsiBlast_PDB 88.3237% -92 - C3 -2ECQ 2.9 ?
101 HHSearch 88.2937% -90 - C3 -3X44 5.2 ?
54 PsiBlast_CBE 88.2638% -90 - C3 -3X44 4.5 ?
18 PsiBlast_PDB 88.1633% -94 - C3 -3PC3 8.0 ?
4 PsiBlast_PDB 88.1533% -99 - C3 -4L0D 3.7 CBS_HUMAN
19 PsiBlast_PDB 88.0533% -92 - C3 -3PC4 5.9 ?
13 PsiBlast_PDB 88.0237% -93 - C3 -1VE1 3.1 ?
55 PsiBlast_CBE 87.2237% -91 - C3 -2EFY 3.7 ?
122 Fugue 87.0733% -91 - C3 -3PC3 8.0 ?
106 HHSearch 86.3735% -96 - C3 -1Z7W 2.6 CYSK1_ARATH
121 Fugue 85.7632% -94 - C3 -1OAS 3.2 CYSK_SALTY
71 PsiBlast_CBE 85.7635%-100 - C3 -4AEC 2.7 CYSKM_ARATH
70 PsiBlast_CBE 85.4435%-100 - C3 -4AEC 3.2 CYSKM_ARATH
83 PsiBlast_CBE 84.6934%-101 - C3 -1Z7W 3.7 CYSK1_ARATH
82 PsiBlast_CBE 84.6334%-101 - C3 -2ISQ 3.3 CYSK1_ARATH
88 PsiBlast_CBE 83.3734%-100 - C3 -1Z7Y 4.5 CYSK1_ARATH
103 HHSearch 82.9635%-100 - C3 -2Q3B 2.9 CYSK_MYCTU
90 PsiBlast_CBE 82.3734% -92 - C3 -2Q3D 6.2 CYSK_MYCTU
81 PsiBlast_CBE 81.5634% -90 * C3 *4LMA 2.9 ?
89 PsiBlast_CBE 81.3534% -99 - C3 -3ZEI 4.1 CYSK_MYCTU
80 PsiBlast_CBE 81.1734% -90 - C3 -4LMA 3.3 ?
100 PsiBlast_CBE 77.0432% -89 - C3 -4LMB 3.5 ?
87 PsiBlast_CBE 76.3431% -95 - C3 -2BHS 1.8 CYSM_ECOLI