@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA3217: (2016-02-15 )
MKPTLPDRSPTSRSVASMREYYSRVLAYIACGASIAAGTYTQYFSYGILWMVPYALLYPHLAYHLGQRFRQHDPRKVTRALLAVDAVHCGLGMALLGFSVVPSLMFLLVLSFTALVIGGLRLLGMALLVSASSALLVAVLVAPPLLGNTPVEVAAVSILFCGLYICITAFFGHQQGLRLAQVRQEIAREQEKAARLARNLAKYLSPQVWEMIFSGKKSVRLETQRKKLTVFFSDIRGFTELSEELEAEALTDLLNNYLNEMSKIALKYGGTIDKFVGDCVMVFFGDPSTQGAKKDAVAAVSMGIAMRKHMKVLRQQWRAQGITKPLEIRMGINTGYCTVGNFGADTRMDYTIIGREVNLASRLESASEAGEILISHETYSLIKDVIMCRDKGQIAVKGFSRPVQIYQVVDSRRDLGAAPSYVEHELPGFSMYLDTNNIQNYDKERVIQALQQAAERLRDKVIL

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

APC_D_16(2BW7)
?
[Raw transfer]



TAT_C_10(1WC1)
?
[Raw transfer]



TAT_B_7(1WC1)
?
[Raw transfer]



TAT_C_10(1WC6)
?
[Raw transfer]



TAT_A_4(1WC1)
?
[Raw transfer]



TAT_B_7(1WC6)
?
[Raw transfer]



APC_C_13(2BW7)
?
[Raw transfer]



APC_D_14(1WC5)
?
[Raw transfer]



APC_C_11(1WC5)
?
[Raw transfer]



APC_B_5(1WC4)
?
[Raw transfer]



APC_B_9(2BW7)
?
[Raw transfer]



APC_B_5(1WC3)
?
[Raw transfer]



APC_A_3(1WC3)
?
[Raw transfer]



APC_B_5(1WC0)
?
[Raw transfer]



APC_B_5(1WC0)
?
[Raw transfer]



APC_B_5(1WC3)
?
[Raw transfer]



TAT_C_10(1WC6)
?
[Raw transfer]



APC_B_5(1WC4)
?
[Raw transfer]



APC_B_5(1WC3)
?
[Raw transfer]



APC_C_11(1WC5)
?
[Raw transfer]



APC_D_16(2BW7)
?
[Raw transfer]



TAT_C_10(1WC1)
?
[Raw transfer]



APC_D_14(1WC5)
?
[Raw transfer]



APC_B_9(2BW7)
?
[Raw transfer]



FOK_C_3(1AB8)
ADCY2_RAT
[Raw transfer]



EDO_A_12(4P2F)
CYA1_MYCTO
[Raw transfer]
21 PsiBlast_CBE 99.11100%-124 - C3 -3R5G - ? -
1 PsiBlast_PDB 99.07100%-127 - C3 -3R5G - ? -
59 HHSearch 98.95100%-126 - C3 -3R5G - ? -
60 HHSearch 77.9036%-112 - C3 -2W01 - ? -
2 PsiBlast_PDB 77.5837%-113 - C3 -2W01 - ? -
25 PsiBlast_CBE 76.2932% -96 - C3 -1WC1 4.1 ?
61 HHSearch 75.9732% -91 - C3 -1WC3 4.6 ?
3 PsiBlast_PDB 75.4632% -95 - C3 -1WC1 4.2 ?
27 PsiBlast_CBE 75.2032% -93 - C3 -2BW7 4.4 ?
26 PsiBlast_CBE 74.6732% -96 - C3 -2BW7 4.2 ?
31 PsiBlast_CBE 74.5532% -98 - C3 -1WC5 3.9 ?
9 PsiBlast_PDB 74.4132% -97 - C3 -2BW7 3.7 ?
6 PsiBlast_PDB 74.0532% -93 - C3 -1WC3 4.6 ?
29 PsiBlast_CBE 73.9132% -93 - C3 -1WC5 4.6 ?
34 PsiBlast_CBE 73.6432% -82 - C3 -1WC0 6.1 ?
4 PsiBlast_PDB 73.4632% -90 - C3 -1WC6 4.3 ?
33 PsiBlast_CBE 73.3732% -88 - C3 -1WC3 4.5 ?
30 PsiBlast_CBE 73.1332% -92 - C3 -1WC5 4.2 ?
8 PsiBlast_PDB 73.0732% -98 - C3 -1WC5 4.2 ?
5 PsiBlast_PDB 72.7732% -91 - C3 -1WC0 4.1 ?
23 PsiBlast_CBE 72.7432% -89 - C3 -1WC6 4.5 ?
24 PsiBlast_CBE 72.7132% -95 - C3 -1WC1 4.3 ?
32 PsiBlast_CBE 72.5932% -92 - C3 -1WC4 6.4 ?
22 PsiBlast_CBE 72.4832% -90 - C3 -1WC6 4.8 ?
28 PsiBlast_CBE 72.4632% -95 - C3 -2BW7 4.6 ?
7 PsiBlast_PDB 72.0932% -87 - C3 -1WC4 4.1 ?