@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA3254: (2016-02-15 )
MSFVSVEQLDKSYGATSIFRDIDFAAARGEFVTLLGPSGCGKSTLLRCIAGLTEVDSGRILIDGEDVVPLPPQKRGIAMVFQSYALFPNMTVQQNVAFGLRMQKVPAAELKQRVAEAIELVELGEYAARYPHQLSGGQCQRVALARSLVTRPRLLLLDEPLSALDARIRKHLREQIRRIQQELGLTTVFVTHDQEEALTLSDRIVLMNAGRIVQSGDAETLYTAPENAFAAGFIGNYNLLDAEQASRLLGQSCAQQVAIRPESLRLGNEPSEGVPALVRSHSLLGNVIRYRVEAAGVELTVDVLNRSADRLYPAGSQLTLVIDRNSIREVA

Atome Classification :

(46 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_J_5(4YMU)
?
[Raw transfer]




ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]




ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]




ATP_B_6(3FVQ)
FBPC_NEIG1
[Raw transfer]




ANP_J_5(3C41)
?
[Raw transfer]




ATP_A_7(4YMU)
?
[Raw transfer]




AGS_B_6(3C4J)
?
[Raw transfer]




ATP_A_6(4YMV)
?
[Raw transfer]




AGS_A_4(3C4J)
?
[Raw transfer]




ATP_A_5(1L2T)
Y796_METJA
[Raw transfer]




ANP_K_6(3C41)
?
[Raw transfer]




ATP_J_5(4YMV)
?
[Raw transfer]




ADP_A_5(2Q0H)
?
[Raw transfer]




ADP_B_6(2OLJ)
?
[Raw transfer]




ADP_A_3(3TIF)
Y796_METJA
[Raw transfer]




ATP_B_6(1L2T)
Y796_METJA
[Raw transfer]




ADP_B_8(3TIF)
Y796_METJA
[Raw transfer]




ADP_A_2(4U00)
?
[Raw transfer]




AT4_D_8(2OLK)
?
[Raw transfer]




ADP_B_6(2Q0H)
?
[Raw transfer]




AT4_B_6(2OLK)
?
[Raw transfer]




AT4_A_5(2OLK)
?
[Raw transfer]




ADP_A_5(2OLJ)
?
[Raw transfer]




AT4_C_7(2OLK)
?
[Raw transfer]




LMT_B_4(4MKI)
ECFA2_CALS4
[Raw transfer]




LMT_A_7(4MKI)
ECFA2_CALS4
[Raw transfer]




103 HHSearch 89.4739%-123 - C1 -2IT1 - ? -
106 HHSearch 89.0041%-109 - C1 -2YYZ - ? -
124 Fugue 88.4938%-109 - C1 -1Z47 - ? -
107 HHSearch 87.6038%-120 - C1 -1Z47 - ? -
102 HHSearch 86.7940%-123 - C1 -1V43 - ? -
5 PsiBlast_PDB 84.1140%-120 - C1 -2YYZ - ? -
108 HHSearch 82.7038%-120 - C1 -3RLF - MALK_ECOLI -
21 PsiBlast_CBE 82.2650%-130 - C1 -1Z47 - ? -
110 HHSearch 81.8033%-114 - C1 -1OXX - ? -
3 PsiBlast_PDB 81.4250%-131 - C1 -1Z47 - ? -
4 PsiBlast_PDB 81.0446%-129 - C1 -2IT1 - ? -
123 Fugue 80.9132%-115 - C1 -1OXS - ? -
14 PsiBlast_PDB 80.5146%-130 - C1 -3PUV - MALK_ECOLI -
1 PsiBlast_PDB 79.3250%-129 - C1 -1V43 - ? -
16 PsiBlast_PDB 78.8446%-129 - C1 -3PUX - MALK_ECOLI -
17 PsiBlast_PDB 78.3446%-130 - C1 -3RLF - MALK_ECOLI -
15 PsiBlast_PDB 77.9546%-130 - C1 -3PUW - MALK_ECOLI -
40 PsiBlast_CBE 77.9235%-118 - C1 -3D31 - ? -
28 PsiBlast_CBE 77.8046%-128 - C1 -3PUW - MALK_ECOLI -
11 PsiBlast_PDB 77.7946%-130 - C1 -3PUY - MALK_ECOLI -
49 PsiBlast_CBE 76.3943%-127 - C1 -3FVQ 7.1 FBPC_NEIG1
50 PsiBlast_CBE 74.5243%-127 - C1 -3FVQ 7.0 FBPC_NEIG1
65 PsiBlast_CBE 67.0936%-115 - C1 -2OLK 5.8 ?
77 PsiBlast_CBE 66.4234%-116 - C1 -4YMV 6.0 ?
57 PsiBlast_CBE 66.2436%-118 - C1 -3C4J 5.0 ?
56 PsiBlast_CBE 65.6636%-116 - C1 -3C41 5.8 ?
55 PsiBlast_CBE 65.6436%-116 - C1 -3C41 5.6 ?
66 PsiBlast_CBE 65.5536%-114 - C1 -2OLK 5.2 ?
58 PsiBlast_CBE 65.4736%-115 - C1 -3C4J 6.6 ?
68 PsiBlast_CBE 65.3436%-113 - C1 -2OLK 5.2 ?
60 PsiBlast_CBE 65.2736%-113 - C1 -2Q0H 5.2 ?
75 PsiBlast_CBE 65.2237%-114 - C1 -4U00 6.3 ?
67 PsiBlast_CBE 65.1936%-114 - C1 -2OLK 5.6 ?
70 PsiBlast_CBE 64.9836%-116 - C1 -2OLJ 4.8 ?
69 PsiBlast_CBE 64.5636%-110 - C1 -2OLJ 5.4 ?
59 PsiBlast_CBE 64.4536%-113 - C1 -2Q0H 5.4 ?
76 PsiBlast_CBE 64.3834%-117 - C1 -4YMV 5.9 ?
98 PsiBlast_CBE 64.2832%-114 - C1 -1B0U 6.2 HISP_SALTY
78 PsiBlast_CBE 64.2134%-119 - C1 -4YMU 5.3 ?
79 PsiBlast_CBE 63.5834%-118 - C1 -4YMU 5.3 ?
88 PsiBlast_CBE 58.2137%-118 - C1 -4MKI 2.2 ECFA2_CALS4
89 PsiBlast_CBE 56.9637%-120 - C1 -4MKI 2.0 ECFA2_CALS4
94 PsiBlast_CBE 52.8232%-111 - C1 -1L2T 6.5 Y796_METJA
92 PsiBlast_CBE 52.3433%-111 - C1 -3TIF 5.9 Y796_METJA
91 PsiBlast_CBE 51.6933%-117 - C1 -3TIF 6.2 Y796_METJA
93 PsiBlast_CBE 50.3632%-112 - C1 -1L2T 6.4 Y796_METJA