@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA3798: (2016-02-20 )
MIQSKLPNVGTTIFTRMSQLAAECGAINLSQGFPDFDGPPELREAVGRHIAAGHNQYAPMTGLPALREQVAKKIEQFYGRRVSADSEVTITPGATEAIFSAIQALVHPGDEVVVLDPSYDSYEPSVQLAGGRCVHVPLALPDFSIDWQRMAEAIGPRTRLVIINTPHNPSGALISREELDRLAALIRDRDIYLISDEVYEHLVFDGVAHTSVLSHDELYPRSFVVSSFGKTYHVTGWKTGYVVAPPALSAELRKVHQYVNFCGVTPLQWALADYMAGHPEHLRQLPGFYQAKRDLFCDLLLDSRFRFTRAPGTYFQCVDYSAIRPDLDDVAMAEWLTREHGVAAIPVSVFYEKAPDAMRLVRFCYAKREETLRQAAEKLCAI

Atome Classification :

(47 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

C6P_B_3(2R5C)
?
[Raw transfer]




QLP_B_4(2R5E)
?
[Raw transfer]




QLP_A_3(2R5E)
?
[Raw transfer]




GOL_B_10(3E2F)
KAT3_MOUSE
[Raw transfer]




HCI_F_6(1V2F)
?
[Raw transfer]




KMT_E_5(1V2E)
?
[Raw transfer]




TRS_A_3(3FVX)
KAT1_HUMAN
[Raw transfer]




GOL_B_9(3E2F)
KAT3_MOUSE
[Raw transfer]




GOL_B_9(2ZJG)
KAT3_MOUSE
[Raw transfer]




HCI_E_5(1V2F)
?
[Raw transfer]




KMT_F_6(1V2E)
?
[Raw transfer]




IAC_A_3(3FVU)
KAT1_HUMAN
[Raw transfer]




IAC_B_8(3FVU)
KAT1_HUMAN
[Raw transfer]




PMP_B_9(1YIY)
?
[Raw transfer]




KYN_A_3(3E2Z)
KAT3_MOUSE
[Raw transfer]




PLP_D_4(1U08)
YBDL_ECOLI
[Raw transfer]




PMP_A_3(1W7N)
KAT1_HUMAN
[Raw transfer]




GOL_A_4(3E2F)
KAT3_MOUSE
[Raw transfer]




GOL_A_6(2O0R)
DAPC_MYCTU
[Raw transfer]




PMP_A_8(1YIY)
?
[Raw transfer]




GLN_B_6(3E2Y)
KAT3_MOUSE
[Raw transfer]




GOL_A_4(2ZJG)
KAT3_MOUSE
[Raw transfer]




PMP_B_5(3E2Y)
KAT3_MOUSE
[Raw transfer]




DPN_A_3(1W7M)
KAT1_HUMAN
[Raw transfer]




KYN_B_5(3E2Z)
KAT3_MOUSE
[Raw transfer]




PLP_C_3(1U08)
YBDL_ECOLI
[Raw transfer]




PMP_A_4(3E2Y)
KAT3_MOUSE
[Raw transfer]




GOL_A_6(2O0R)
DAPC_MYCTU
[Raw transfer]




GOL_B_4(3FVS)
KAT1_HUMAN
[Raw transfer]




PMP_A_4(3E2Y)
KAT3_MOUSE
[Raw transfer]




PLP_E_5(1GDE)
?
[Raw transfer]




PMP_B_4(3E2Z)
KAT3_MOUSE
[Raw transfer]




GLN_A_3(3E2Y)
KAT3_MOUSE
[Raw transfer]




PLP_A_3(1V2F)
?
[Raw transfer]




PLP_B_4(1V2F)
?
[Raw transfer]




PLP_A_5(1B5O)
AAT_THET8
[Raw transfer]




PLP_A_3(1V2E)
?
[Raw transfer]




PLP_A_5(5BJ4)
AAT_THET8
[Raw transfer]




PLP_A_5(1B5P)
AAT_THET8
[Raw transfer]




PLP_A_3(1GD9)
?
[Raw transfer]




PLP_A_3(1GD9)
?
[Raw transfer]




PLP_A_5(1B5P)
AAT_THET8
[Raw transfer]




PLP_A_12(1O4S)
AAT_THEMA
[Raw transfer]




PLP_F_6(1GDE)
?
[Raw transfer]




PLP_B_4(1GD9)
?
[Raw transfer]




PLP_B_4(1DJU)
?
[Raw transfer]




PLP_B_4(1V2E)
?
[Raw transfer]




PLP_A_3(1DJU)
?
[Raw transfer]




21 PsiBlast_CBE 97.4455%-120 - C1 -1U08 5.0 YBDL_ECOLI
1 PsiBlast_PDB 95.8355%-118 - C1 -1U08 - YBDL_ECOLI -
81 HHSearch 95.2154%-119 - C1 -1U08 5.8 YBDL_ECOLI
2 PsiBlast_PDB 79.5238%-112 - C1 -2O0R 3.1 DAPC_MYCTU
101 HHSearch 78.9740%-110 - C1 -2O0R 3.1 DAPC_MYCTU
86 HHSearch 74.0234%-111 - C1 -1YIZ - ? -
33 PsiBlast_CBE 73.3933%-115 - C1 -4WLH - KAT1_HUMAN -
30 PsiBlast_CBE 72.8333%-112 - C1 -4WLJ - KAT1_HUMAN -
36 PsiBlast_CBE 71.9433%-112 - C1 -3FVS 2.7 KAT1_HUMAN
82 HHSearch 71.8034%-110 - C1 -3E2Y 5.7 KAT3_MOUSE
35 PsiBlast_CBE 71.7133%-112 - C1 -3FVU 2.9 KAT1_HUMAN
14 PsiBlast_PDB 71.6833%-114 - C1 -1W7M 2.8 KAT1_HUMAN
34 PsiBlast_CBE 71.0033%-112 - C1 -3FVX - KAT1_HUMAN -
19 PsiBlast_PDB 70.9333%-112 - C1 -4WP0 - KAT1_HUMAN -
15 PsiBlast_PDB 70.6833%-113 - C1 -3FVS - KAT1_HUMAN -
17 PsiBlast_PDB 70.6433%-114 - C1 -3FVX 2.5 KAT1_HUMAN
13 PsiBlast_PDB 70.4033%-111 - C1 -1W7N 5.7 KAT1_HUMAN
12 PsiBlast_PDB 69.6938%-113 - C1 -1V2F 4.7 ?
5 PsiBlast_PDB 69.5933%-115 - C1 -3E2F 2.9 KAT3_MOUSE
9 PsiBlast_PDB 69.5732%-113 - C1 -2R5E 8.6 ?
11 PsiBlast_PDB 69.2938%-114 - C1 -1V2E 3.1 ?
26 PsiBlast_CBE 69.1733%-115 - C1 -3E2F 2.6 KAT3_MOUSE
16 PsiBlast_PDB 68.9533%-112 - C1 -3FVU 2.5 KAT1_HUMAN
28 PsiBlast_CBE 68.9238%-112 - C1 -1V2F 4.7 ?
7 PsiBlast_PDB 68.6532%-112 - C1 -1YIY 6.0 ?
8 PsiBlast_PDB 68.2332%-112 - C1 -2R5C 7.6 ?
22 PsiBlast_CBE 67.9933%-114 - C1 -3E2Y 6.2 KAT3_MOUSE
24 PsiBlast_CBE 67.8932%-113 - C1 -1YIY 5.5 ?
6 PsiBlast_PDB 67.8633%-113 - C1 -2ZJG 2.7 KAT3_MOUSE
23 PsiBlast_CBE 67.8432%-112 - C1 -2R5E 7.5 ?
27 PsiBlast_CBE 67.2233%-113 - C1 -2ZJG 2.6 KAT3_MOUSE
3 PsiBlast_PDB 67.1433%-112 - C1 -3E2Z 5.6 KAT3_MOUSE
4 PsiBlast_PDB 66.7233%-113 - C1 -3E2Y 5.7 KAT3_MOUSE
29 PsiBlast_CBE 66.0838%-111 - C1 -1V2E 3.2 ?
83 HHSearch 66.0731%-117 - C1 -1GD9 3.9 ?
25 PsiBlast_CBE 65.9333%-114 - C1 -3E2Z 3.3 KAT3_MOUSE
40 PsiBlast_CBE 65.1735%-111 - C1 -1B5P 3.2 AAT_THET8
44 PsiBlast_CBE 64.9035%-112 - C1 -5BJ4 3.4 AAT_THET8
42 PsiBlast_CBE 64.6835%-111 - C1 -1B5O 3.1 AAT_THET8
90 HHSearch 64.0535%-105 * C1 *1B5P 3.2 AAT_THET8
91 HHSearch 63.4831%-110 - C1 -1O4S 3.0 AAT_THEMA
67 PsiBlast_CBE 63.3131%-112 - C1 -1GDE 3.7 ?
68 PsiBlast_CBE 62.2931%-113 - C1 -1GDE 3.4 ?
70 PsiBlast_CBE 61.9231%-115 - C1 -1GD9 3.9 ?
65 PsiBlast_CBE 61.8431%-111 - C1 -1DJU 2.6 ?
66 PsiBlast_CBE 61.7331%-115 - C1 -1DJU 3.3 ?
69 PsiBlast_CBE 61.0731%-113 - C1 -1GD9 3.4 ?