@TOME V2.3
(Nov 2016)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA4696: (2016-02-29 )
MELLSGAEMVVRSLRDEGVKYIYGYPGGALLHIYDALFKEHDVTHILVRHEQAATHMADGYARATGKPGVVLVTSGPGATNAITGIATAYMDSIPMVILSGQVPSNMVGTDAFQETDMVGISRPIVKHSFIIKHPSEIPEVIKKAFYLAQSGRPGPVVVDIPKDMGDPTQKFEYSYPKKVKLRSYSPAVRGHSGQIRKAAEMLLAAKRPVVYSGGGVIMGNAAAPLTELAQMLNLPVTNTLMGLGGYPGADRQFLGMLGMHGSFTANLAMHHSDVILAVGARFDDRVINGAAKFCPNAKIIHIDIDPASISKTIKADIPIVGPVDSVLTEMVAIVREIGETPNQDAQAAWWKQIDEWRGNRGLFPYDKGDGSIIKPQTVIETLYEVTHGDAFITSDVGQHQMFASQYYKFNKPNRWINSGGLGTMGFGFPAAMGIKLNFPDDDVACVTGEGSIQMNIQELSTCLQYDLPVKIVNLNNGALGMVRQWQDMQYNSRYSHSYMESLPDFVKLAEAYGHVGMRITDLKDLKPKMEEAFAMKNRLVFLDIQVDASEHVYPMQIRDGAMRDMWLSKTERT

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_A_9(1T9B)
ILVB_YEAST
[Raw transfer]



FAD_B_14(1N0H)
ILVB_YEAST
[Raw transfer]



FAD_B_11(1T9C)
ILVB_YEAST
[Raw transfer]



FAD_B_12(1T9B)
ILVB_YEAST
[Raw transfer]



FAD_A_9(1T9C)
ILVB_YEAST
[Raw transfer]



FAD_A_9(1T9B)
ILVB_YEAST
[Raw transfer]



FAD_A_10(1T9A)
ILVB_YEAST
[Raw transfer]



FAD_B_14(1T9A)
ILVB_YEAST
[Raw transfer]



FAD_A_10(1N0H)
ILVB_YEAST
[Raw transfer]



1TB_B_11(1T9A)
ILVB_YEAST
[Raw transfer]



1CS_B_11(1T9B)
ILVB_YEAST
[Raw transfer]



1TB_A_7(1T9A)
ILVB_YEAST
[Raw transfer]



1CS_A_7(1T9B)
ILVB_YEAST
[Raw transfer]



1SM_A_7(1T9C)
ILVB_YEAST
[Raw transfer]



1SM_B_10(1T9C)
ILVB_YEAST
[Raw transfer]



CIE_B_11(1N0H)
ILVB_YEAST
[Raw transfer]



CIE_A_7(1N0H)
ILVB_YEAST
[Raw transfer]



AYD_A_9(1N0H)
ILVB_YEAST
[Raw transfer]



TPP_A_10(1JSC)
ILVB_YEAST
[Raw transfer]
3 PsiBlast_PDB 97.8242% -98 - C5 -1T9A 13.1 ILVB_YEAST
6 PsiBlast_PDB 97.7042%-100 - C5 -1T9D - ILVB_YEAST -
1 PsiBlast_PDB 97.3442%-104 - C5 -1JSC 6.3 ILVB_YEAST
25 PsiBlast_CBE 97.1742% -99 - C5 -1T9B 10.6 ILVB_YEAST
29 HHSearch 97.0842% -98 - C5 -1T9B 12.8 ILVB_YEAST
5 PsiBlast_PDB 97.0842% -99 - C5 -1T9C 12.8 ILVB_YEAST
24 PsiBlast_CBE 96.9042%-101 - C5 -1T9C 12.9 ILVB_YEAST
21 PsiBlast_CBE 96.8842% -97 - C5 -1T9D - ILVB_YEAST -
23 PsiBlast_CBE 96.6442%-101 - C5 -1T9D - ILVB_YEAST -
27 PsiBlast_CBE 96.5442% -99 - C5 -1N0H 12.3 ILVB_YEAST
26 PsiBlast_CBE 96.5142% -98 - C5 -1T9A 12.9 ILVB_YEAST
2 PsiBlast_PDB 96.3942% -98 - C5 -1N0H 12.4 ILVB_YEAST
4 PsiBlast_PDB 96.2142%-101 - C5 -1T9B 12.8 ILVB_YEAST
22 PsiBlast_CBE 96.0842% -98 - C5 -1T9D - ILVB_YEAST -
31 HHSearch 87.9332% -90 * C5 *2PAN - GCL_ECOLI -
7 PsiBlast_PDB 87.4733% -93 - C5 -2PAN - GCL_ECOLI -
33 HHSearch 81.5926% -93 - C5 -3EYA - POXB_ECOLI -
14 PsiBlast_PDB 80.8030% -86 - C5 -2EZ8 - POXB_LACPL -
18 PsiBlast_PDB 80.6530% -86 - C5 -1POX - POXB_LACPL -
10 PsiBlast_PDB 80.5130% -86 - C5 -4FEG - ? -