@TOME V3
(Feb 2022)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : P96762_ENTGA: (2019-02-01 )
MKQNKLHYTTMIMTQFPDISIQSVESLGEGFRNYAILVNGDWVFRFPKSQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQILGEDGMAVFPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAISDPDYDYVYLLEDCGELFTRQVMAYRGEVDLDTHIRKVSLFVTFDQVSYLLEGLRARDQDWISEGLELLEEDKANNFGANSA

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GDP_A_2(3TDW)
?
[Raw transfer]




GDP_A_2(3TDW)
?
[Raw transfer]




GDP_A_3(3TDV)
?
[Raw transfer]




GDP_B_7(3TDV)
?
[Raw transfer]




ADP_A_5(4N57)
?
[Raw transfer]




GMP_A_3(4DTB)
?
[Raw transfer]




ADN_A_3(4DT8)
?
[Raw transfer]




GMP_B_5(4DTB)
?
[Raw transfer]




ADN_A_3(4DTA)
?
[Raw transfer]




QUE_A_4(4DFU)
?
[Raw transfer]




2 PsiBlast_PDB 99.7899%-127 - C2 -3TDW 7.6 ?
1 PsiBlast_PDB 99.45100%-128 - C2 -3TDV 7.3 ?
21 Blastp_CBE 97.98100%-123 - C2 -3TDV 7.3 ?
93 HHSearch 85.0390% -51 - C2 -3TDW 7.6 ?
103 HHSearch 55.0025% -22 - C2 -4DCA - ? -
96 HHSearch 54.4822% 6 - C2 -5IQI - AACA_STAAU -
97 HHSearch 54.2322% 7 - C2 -5IQC - AACA_STAAU -
15 PsiBlast_PDB 53.9029% 1 - C2 -5C4K - ? -
8 PsiBlast_PDB 53.4530% 4 - C2 -3SG8 - ? -
20 PsiBlast_PDB 53.0830% 10 - C2 -4DFU 5.3 ?
12 PsiBlast_PDB 53.0830% 1 - C2 -3SG9 - ? -
5 PsiBlast_PDB 52.8030% 3 - C2 -6CD7 - ? -
94 HHSearch 52.6928% 5 - C- -3N4U - ? -
3 PsiBlast_PDB 52.5630% 5 - C2 -4DTB 4.8 ?
16 PsiBlast_PDB 52.2829% 0 - C2 -5C4L - ? -
10 PsiBlast_PDB 52.1430% 7 - C2 -4DT9 - ? -
13 PsiBlast_PDB 52.0830% 6 - C2 -4DTA 4.7 ?
9 PsiBlast_PDB 51.7230% 7 - C2 -4DT8 4.7 ?
22 Blastp_CBE 51.4731% 7 - C2 -4DTB 3.9 ?
14 PsiBlast_PDB 51.3729% 1 - C2 -4N57 6.2 ?