@TOME V3
(Feb 2022)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : BR29_052330T0_kcl78: (2019-03-28 )
QIGKWVLSKEQIDALFFYQCQVTIHYPGAERGKLLKYLAEPREPIPLPKFQGKLYYAISDSGCKYREYSKGDPWPKGL
Atome Classification :
(20 SA)
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------..-......-.-10---.......-----..20--.--.....-------------.-.30......---.--..40.----------.-----------.---------.--.....-------50.........60.......--..----70.......
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QI-G
K
W
V
L
S
-
K
-E----QI
D
A
L
F
F
-----
Y
Q
C
Q
--
V
--
T
I
HYP-------------G-AE-
R
G
K
L
L
K
---
Y
--
L
AE-P----------R-----------E---------P--IPLPK-------F-Q
G
K
L
Y
Y
A
ISD-SGCKYRE--YS----KGDPWPKGL
56
Fugue
71.12
31%
18
- C9 -
0.25
4F0D
1
PAR16_HUMAN
A:
[2-271]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGWAAAREAAGRDMLAADLRCSLFASALQSYKRDSVLRPFPASYARGDCKDFEALLADASKLPNLKELLQSSGDNHKRAW
D
L
-
V
S
W
I
L
S
-
S
-
K
----
V
-----------------
L
--
T
I
H
S
A
-------------
G
K
A
E
-
F
E
K
I
Q
K
---
L
--
T
G
A
-
P
----------
H
-----------
T
---------
P
--
V
P
A
P
D
-------
F
-
L
F
E
I
E
Y
F
D
P
A
-
N
A
K
F
Y
E
T
--
K
G
----
E
R
D
-----
L
30
SP3
67.82
24%
-16
- C9 -
0.11
1SMP
-
INH_DICCH
I:
[1-100]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SSLRLPSAA
E
L
S
G
Q
W
V
L
S
-
G
A
E
----
Q
H
C
D
I
R
L
-----
N
T
D
V
--
L
DG
T
T
W
K
L
-------------
A
-
G
D
-
T
A
C
L
Q
K
---
L
--
L
P
E
A
P
----------
V
GWRP-------
T
---------
P
DG
L
T
L
T
Q
-------
A
-
D
G
S
A
V
A
F
F
S
R
-
N
R
D
R
Y
E
H
--
K
L
---------
V
D
G
S
64
Fugue
64.25
25%
122
- C8 -
-
5BP8
1
?
A:
[6-520]
----------------------------------------------------------------------------------------------------------------------------------APREAEAAALLAATVADPWGLVAPSVYDTARLVSLAPWLDGHRERLGYLAKEQNQDGSWGAPDGYGLVPTLSAVEALLTELARTDSGAPHLSPDDLAAACADGLGALRDGLLAGPVPDTIGVEFVAPSLLADINTRLAALTEQAPG
K
L
-
G
A
W
S
G
T
-----------------------------
T
L
T
S
P
-------------
A
-
P
D
L
D
G
A
L
L
A
---
G
--
V
R
E
M
T
----------
E
-----------
Q
---------
A
---
P
L
P
E
-------
K
-
L
W
H
T
L
E
A
V
T
R
-
D
G
T
R
G
A
R
--
P
H
----
E
G
A
P
P
H
N
G
S
67
Fugue
61.69
22%
-102
* C10 *
-
1KG1
-
?
A:
[1-60]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
R
C
R
--
Y
--
T
L
C
C
D
-------------
G
-
A
L
-
K
A
V
S
A
C
---
L
--
H
E
S
-
E
----------
S
-----------
C
---------
L
--
V
P
G
D
C
-------
C
-
R
G
K
S
R
L
T
L
-----
C
S
Y
G
E
--
G
G
----
N
G
F
Q
C
P
T
G
Y
59
Fugue
59.74
22%
49
- C9 -
0.08
5B64
-
?
B:
[8-123]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NNSLMRLRE
Q
I
-
V
K
A
N
L
L
-
V
-
R
----
E
A
S
Y
I
A
E
ELDKR
T
E
Y
K
--
V
--
T
L
Q
I
P
-------------
T
-
S
S
-
L
D
A
N
R
K
RGS
L
--
L
S
E
-
P
AIQVRRKGKG
K
-----------
Q
---------
I
--
W
S
L
E
K
-------
L
-
E
N
R
L
L
-
D
M
R
D
-
L
Y
Q
E
W
K
E
--
C
E
----
E
D
S
P
V
S
R
S
Y
25
SP3
57.74
17%
-56
- C10 -
-
1KG1
-
?
A:
[1-60]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
R
C
R
--
Y
--
T
L
C
C
D
-------------
G
-
A
L
-
K
A
--
V
S
---
A
--
C
L
H
-
E
----------
S
-----------
E
---------
S
--
C
L
V
P
G
DC-----
C
-
R
G
K
S
R
L
T
L
-----
C
S
Y
G
E
--
G
G
----
N
G
F
Q
C
P
T
G
Y
57
Fugue
57.08
15%
-0
- C9 -
0.06
4WBX
-
?
C:
[4-382]
-----------------------------------------------------------RFPFPVGEPDFIQGDEAIARAAILAGCRFYAGYPITPASEIFEAMALYMPLVDGVVIQMEDEIASIAAAIGASWAGAKAMTATSGPGFSLMQENIGYAVMTETPVVIVDVQRSGLPAQGDIMQAIWGTHGDHSLIVLSPSTVQEAFDFTIRAFNLSEKYRTPVILLTDAEVGHMRERVYIPNPDEIEIINRLIKRIVEKIEKNKKDIFTYETYELED
A
V
-
A
T
G
I
V
A
-
R
-
S
ALLL
K
I
E
T
I
W
P
-----
F
D
-------------------------------
F
E
L
I
E
---
R
--
I
A
E
-
R
----------
V
-----------
D
---------
K
--
L
Y
V
P
E
-------
M
N
L
G
Q
L
Y
H
L
I
K
E
-
G
A
N
G
K
A
E
--
V
K
----
L
I
S
K
I
G
G
E
V
26
SP3
56.36
12%
17
- C10 -
-
1L4I
-
FOCC_ECOLX
A:
[121-205]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
I
P
-
P
-
E
----
Q
A
P
G
K
L
E
-----
F
T
R
E
--
L
--
T
L
F
N
P
TPYYLTVTDLKAG
N
-
K
S
-
L
E
N
T
M
--------
V
P
-
P
----------
Q
-----------
G
---------
K
--
V
T
V
N
I
-------
G
-
G
D
I
T
Y
K
T
I
N
D
-
Y
G
--------
A
----
L
T
E
Q
V
R
G
V
V
38
HHSearch
55.19
38%
-233
* C11 *
-
2AYD
1
A:
[12-36]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
I
V
N
-
D
G
Y
R
W
R
K
--
Y
G
QKSV
K
G
S
P
Y
P
R
S
-
63
Fugue
54.07
21%
9
- C9 -
0.27
5TZJ
1
?
A:
[1-349]
MKFSVIVPTYNSEKYITELLNSLAKQDFPKTEFEVVVVDDCSTDQTLQIVEKYRNKLNLKVSQLETNSGGPGKPRNVALKQAEGEFVLFVDSDDYINKETLKDAAAFIDEHHSDVLLIKMKGVNGRGVPQSMFKETAPEVTLLNSRIIYTLSPTKIYRTALLKDNDIYFPEELKSAEDQLFTMKAYLNANRISVLSDKAYYYATKREGEHMSSAYVSPEDFYEVMRLIAVEILNADLEEAHKDQILAEFLNRHFSFSRTNGFSLKVKLEEQPQWIN
A
L
-
G
D
F
I
Q
A
V
P
-
E
----
R
V
D
A
L
V
M
-----
S
K
L
R
--
P
--
L
L
H
Y
A
-------------
R
-
A
K
-
D
I
D
N
Y
R
---
T
--
V
E
E
-
S
----------
Y
-----------
R
---------
Q
-----------------
G
Q
Y
Y
R
F
D
I
V
-
D
G
K
L
N
I
Q
--
F
N
----
E
G
E
P
Y
F
E
G
I
60
Fugue
52.15
13%
-59
- C9 -
0.13
1NEI
-
YOAG_ECOLI
A:
[1-60]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
-----
G
K
A
T
--
Y
--
T
V
T
V
T
-------------
N
-
N
S
-
N
G
V
S
V
D
---
Y
--
E
T
E
-
T
----------
P
-----------
M
---------
T
--
L
L
V
P
E
-------
V
-
A
A
E
V
I
K
D
L
V
N
-
T
V
R
S
Y
D
T
--
E
N
----
E
H
D
V
--
C
G
W
65
Fugue
51.81
19%
89
- C5 -
-
4RMB
-
?
A:
[494-642]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QTETYITQINPEGKEMYFASGLGNLYTIIGSDGSPVNLLNA
E
V
-
K
I
L
K
T
N
-
S
-
K
----
N
L
T
N
Y
D
S
-----
P
E
F
E
D-
V
--
T
S
Q
Y
S
-------------
Y
-
T
N
-
D
G
S
K
I
T
---
I
--
D
W
K
-
T
----------
N
-----------
S
ISSTTSYVV
L
--
V
K
I
P
K
-------
Q
-
S
G
V
L
Y
S
T
V
S
D
I
N
Q
T
Y
G
S
K
--
Y
S
----
Y
G
H
T
N
I
S
G
D
55
Fugue
49.59
12%
-29
- C9 -
0.21
4K59
-
?
A:
[3-68]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
M
-
G
F
L
I
L
S
-
R
-
R
----
E
G
E
G
I
T
L
-----
S
L
----------
K
A
-------------
D
-
Y
P
-
A
E
E
L
I
R
---
Q
--
L
R
E
-
G
----------
G
-----------
I
---------
R
--
I
L
V
T
D
-------
I
-
I
G
N
-
Q
A
R
V
G
I
-
E
A
P
R
G
V
L
--
I
V
----
R
D
E
L
-----
24
SP3
49.56
14%
-84
- C9 -
0.12
1RZS
-
RCRO_BPP22
A:
[1-61]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
Y
-
K
-
K
----
D
V
I
D
H
F
G
-----
T
Q
R
A
--
V
--
A
-------------------
K
A
-
L
G
I
S
D
A
---
A
--
V
S
Q
-
W
----------
K
-----------
E
-------------
V
I
P
E
-------
K
-
D
A
Y
R
L
E
I
V
T
A
-
G
A
L
K
Y
Q
E
NA
Y
R
----
Q
A
A
------
29
SP3
49.09
17%
62
- C9 -
1KSI
-
AMO_PEA
A:
[1-91]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------V
Q
H
-
P
L
D
P
L
T
-
K
-
E
----
E
F
L
A
V
--------
Q
T
I
--
V
--
Q
N
K
Y
P
-------------
I
-
S
N
-
N
R
L
A
F
H
---
Y
IG
L
D
D
-
P
----------
E
KDHVLRYETHP
T
---------
L
--
V
S
I
P
R
KIFVVAI
I
-
N
S
Q
T
H
E
I
L
I
N
-
L
R
I
R
S
I
V
--
S
D
----
N
I
H
---
N
G
Y
22
SP3
45.81
12%
37
- C9 -
0.30
1O6W
-
PRP40_YEAST
A:
[1-75]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
-
S
I
W
K
E
A
-
K
-
D
----
A
S
G
R
I
Y
Y
-----
Y
N
T
L
TK
K
--
S
T
W
E
K
-------------
P
-
K
E
-
L
I
S
Q
E
E
---
L
--
L
L
R
-
E
----------
N
-----------
G
---------
W
--
K
A
A
K
T
-------
A
-
D
G
K
V
Y
Y
Y
--
N
-
P
T
T
R
E
T
S
--
W
T
----
I
----
P
A
F
E
4
PsiBlast_PDB
45.79
44%
173
- C13 -
-
1BKD
-
SOS1_HUMAN
S:
[1017-1041]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
-
P
----------
R
-----------
N
---------
P
--
K
P
L
P
R
-------
F
-
P
K
K
Y
S
Y
P
L
K
S
-
P
G
V
R
--------------------
1
PsiBlast_PDB
45.41
44%
173
- C13 -
-
1XDV
-
SOS1_HUMAN
A:
[1017-1041]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
-
P
----------
R
-----------
N
---------
P
--
K
P
L
P
R
-------
F
-
P
K
K
Y
S
Y
P
L
K
S
-
P
G
V
R
--------------------
34
HHSearch
45.35
55%
-180
- C4 -
-
3LQV
-
SF3B1_HUMAN
P:
[22-32]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
L
S
-
D
-
E
----
E
L
D
A
M
F
-------------------------------------------------------------------------------------------------------------------------------------------
6
PsiBlast_PDB
45.22
44%
214
- C13 -
-
1NVV
-
S:
[452-476]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
-
P
----------
R
-----------
N
---------
P
--
K
P
L
P
R
-------
F
-
P
K
K
Y
S
Y
P
L
K
S
-
P
G
V
R
--------------------