@TOME V3
(Feb 2022)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : BR29_103370T0_kcl80: (2019-03-28 )
RRVFKIDGEEFTPLETDCLIRIFKNKKTVHALFVPPGTELDWRLDHNHYAVGIKHNCDIIIGWKPSSWRIEGD
Atome Classification :
(20 SA)
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------......-----...10.-.----..---....20.-----..-..--.-..30-----...--.----...--.---40....-----.-----.-..50...-.----.------..-------------.---60---.----..---.....70-..
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------R
R
V
F
K
I-----DGEEFT-P----L
E
---
T
D
C
L
I
R
I
-----FK-NK--
K
-
T
V
H
A
-----
L
FV--P----PGT--E---
L
D
W
R
LD-----H-----N-
H
Y
A
V
G
IK-H----N------
C
D
-------------
I
---
I
I
---
G
----WK---PS
S
W
R
IE-GD
26
Fugue
63.24
17%
-71
- C7 -
0.44
2MM2
-
?
A:
[1-65]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
C
T
A
N
I
-----
L
N
I
N
E
--
V
-
V
I
A
T
-----
G
C
V
--
P
----
A
G
G
--
N
---
L
I
I
R
V
G
-----
S
D----
H
-
S
Y
L
I
R
A
T
-
V
----
S
------
C
G
-------------
L
---
S
L
---
N
----
P
S
QSF
I
N
G
E
S
L
A
-
S
G
25
Fugue
62.51
19%
-53
- C7 -
0.46
2MYW
-
?
A:
[7-85]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SG
R
E
N
L
Y
F
-----
Q
G
H
M
A
A
-
P
----
A
R
---
F
C
V
Y
Y
D
G
-----
H
L
-
P
A
--
T
-
R
V
L
L
-----
M
Y
V
--
R
----
I
G
T
--
T
---
A
T
I
T
A
R
-----
G
-----
H
-
E
F
E
V
E
A
K
D
Q
----
N
------
C
K
-------------
V
---
I
L
TNG
K
----
Q
A
---
P
D
W
L
A
A
E
-
P
Y
24
Fugue
60.81
19%
81
- C7 -
0.53
5A6W
4
?
C:
[11-93]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RAIDLSR
E
R
D
P
N
F
-----
F
D
H
P
G
I
-
P
----
V
P
----
E
C
F
W
F
M
-----
F
K
-
N
N
--
V
-
R
Q
D
A
-----
G
T
C
--
Y
----
S
S
W
--
K
---
M
D
M
K
V
G
-----
P
-----
N
-
W
V
H
I
K
S
D
-
D
----
N
------
C
N
-------------
L
---
S
G
---
D
----
F
----
P
P
G
W
I
V
L
-
G
K
32
Fugue
55.29
20%
33
- C9 -
-
3V97
6
RLMKL_ECOLI
B:
[2-703]
---------------------------MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHRNSQYGAMKVKDAIVDAFTRPRPNVDRDAPDIRVNVWSIALDLSGDGLHLRGYRDIAPIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYSEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAHKARQRLFDIIAATISVLGIAPNKLVLKTREKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERN
L
R
L
N
G
L
-----
T
G
R
A
H
R
-
L
----
I
Q
---
A
D
C
L
A
W
L
-----
R
E
-
A
N
--
E
-
Q
F
D
L
-----
I
F
I
--
D
----
P
P
T
--
F
SNA
F
D
V
Q
R
D
-----
H
-----
L
-
A
L
M
K
D
L
K
-
R
LLRA
G
------
G
T
-------------
I
---
M
F
---
S
----
N
N
---
K
R
G
F
R
M
D
-
L
D
30
Fugue
52.95
23%
-
- C- -
-
4BOU
-
OTUD3_HUMAN
A:
[50-190]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GPEFVSFANQLQALGLKLREVPGDGNCLFRALGDQLEGHSRNHLKHRQET
V
D
Y
M
I
K
-----
Q
R
E
D
F
E
-
P
----
F
V
---
E
D
D
-
I
P
F
-----
E
K
-
H
V
--
A
-
S
L
A
-----------
K
----
P
G
T
--
F
---
A
G
---
N
-----
D
-----
A
-
I
V
A
F
A
R
N
-
H
----
Q
------
L
N
-------------
V
---
V
I
H--
Q
----
L
N
---
A
P
L
W
Q
I
R
-
G
T
28
Fugue
52.41
20%
43
- C9 -
-
3V97
6
RLMKL_ECOLI
A:
[1-703]
AMNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLVYQSLMWSRLASRIMLPLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTIRNSQYGAMKVKDAIVDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLHLRGYRDRAGIAPIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGESEPALIALHSLLGRIMKNQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESMVAEDYTNRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYADWVVVQEYAHKARQRLFDIIAATISVLGIAPNKLVLKTREEKGEFLEVTEYNAHLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERN
L
R
L
N
G
L
-----
T
G
R
A
H
R
-
L
----
I
Q
---
A
D
C
L
A
W
L
-----
R
E
-
A
N
--
E
-
Q
F
D
L
-----
I
F
I
--
D
----
P
P
T
FS
A
---
F
D
V
Q
R
D
-----
H
-----
L
-
A
L
M
K
D
L
K
-
R
LLRA
G
------
G
T
-------------
I
---
M
F
---
S
----
N
N
---
K
R
G
F
R
M
D
-
L
D
45
SP3
51.74
16%
17
- C7 -
0.36
1L9N
-
TGM3_HUMAN
A:
[594-692]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PTLTLEVLNEARV
R
K
P
V
N
V
-----
Q
-
M
L
F
S
N
P
----
L
D
EPV
R
D
C
V
L
M
V
EGSGL
L
L
-
G
N
--
L
-
K
I
D
V
-----
P
T
L
--
G
----
P
K
E
--
R
---
S
R
V
R
F
D
ILPSR
S
-----
G
-
T
K
Q
L
L
A
D
-
F
----
S
------
C
N
-------------
K
FPA
I
K
---
A
----
M
L
-----
S
I
D
V
A
-
E
-
37
Fugue
49.18
15%
33
- C7 -
0.39
3DJL
1
AIDB_ECOLI
A:
[3-540]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WQTHTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLASIGQQLGTAESLELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHNLAWEEDARSGAFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPAPFQDWTTPLLSDRYDSHLLPGGQKRGLLIGMGMTEKQGGSDVMSNTTRAERLE
D
G
S
Y
R
L
-----
V
G
H
K
W
F
-
F
SV--
P
Q
---
S
D
A
H
L
V
L
-----
A
Q
-
T
A
--
G
-
G
L
S
C
-----
F
F
V
--
P
RFLP
D
G
Q
--
R
---
N
A
I
R
L
E
-----
R
-----
L
-
K
D
K
L
G
N
R
-
S
----
N
------
A
S
-------------
C
---
E
V
---
E
----
F
Q
---
D
A
I
G
W
L
L
-
G
L
49
SP3
48.10
15%
-8
- C7 -
0.11
1JMX
-
?
A:
[282-363]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GK
A
R
L
L
A
V
-----
Q
-
P
A
F
I
-
K
----
A
G
---
G
E
S
E
I
T
L
-----
V
--
G
S
--
G
-
L
A
G
K
-----
P
D
L
--
G
----
A
G
V
--
E
---
V
T
E
V
L
E
-----
Q
-----
T
-
P
T
L
V
R
L
K
-
A
----
R
------
A
A
------------------
A
---
D
----
A
K
---
P
G
Q
R
E
V
A
V
G
T
40
SP3
48.04
12%
-55
- C7 -
0.40
1WAP
2
MTRB_BACSU
A:
[8-75]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
F
V
V
I
-----
K
A
V
E
---------
D
---
G
V
N
V
I
G
L
-----
T
R
-
G
T
DT
K
-
F
H
H
S
-----
E
K
L
--
D
----
K
G
E
--
V
---
I
I
A
Q
F
T
-----
E
-----
H
-
T
S
A
I
K
V
R
-
G
----
E
------
A
L
-------------
I
---
Q
T
---
A
----
Y
-----
G
E
M
K
S
E
-
K
K
42
SP3
47.03
13%
35
- C7 -
0.37
1BF4
-
DN7D_SULAC
A:
[1-63]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A
T
V
K
F
K
Y
-----
K
G
E
E
-
K
-
E
----
V
D
---
I
S
K
I
K
K
V
-----
W
R
-
V
G
--
K
-
M
I
S
F
-----
T
Y
D
--
E
----
G
G
G
--
K
--------------
T
-----
G
-
R
G
A
V
S
E
K
-
D
----
A
------
P
K
-------------
E
---
L
L
---
Q
----
M
L
---
E
K
Q
K
K
-----
44
SP3
46.10
20%
64
- C7 -
0.45
1QFH
-
GELA_DICDI
A:
[750-857]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GANGEDSSFG
S
F
T
F
T
V
AAKNK
K
G
E
V
K
T
-
Y
----
G
G
---
D
K
F
E
V
S
I
-----
T
G
-
P
A
--
E
-
E
I
T
L
-----
D
A
I
DN
Q
----
D
G
T
Y-
T
---
A
A
Y
S
L
V
-----
G
-----
N
G
R
F
S
T
G
V
K
-
L
----
N
------
G
K
-------------
H
---
I
E
---
G
-----
S
---
P
F
K
Q
V
L
G
-
N
P
38
Fugue
41.61
18%
77
- C7 -
0.33
1TCR
1
TVA1_MOUSE
A:
[113-202]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IQNPE
P
A
V
Y
A
L
-----
K
D
P
R
-
S
-
Q
----
D
S
---
T
L
C
L
F
T
D
-----
F
D
-
S
Q
--
I
-
N
V
P
K
TMESG
T
F
I
--
T
----
D
A
T
--
V
---
L
D
M
K
A
M
-----
D
-----
S
-
K
S
N
G
A
I
A
-
W
----
S
NQTSFT
C
Q
-------------
D
---
I
F
---
K
----
E
T
---
N
A
T
Y
P
S
S
-
D
V
15
HHSearch
41.46
16%
-124
- C7 -
0.14
3WTS
-
PEBB_MOUSE
B:
[44-111]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
F
Q
N
A
-----
C
R
-
D
---
G
-
R
S
E
I
-----
A
F
V
--
A
----
T
G
T
--
N
---
L
S
L
Q
F
F
-----
P
-----
A
-----
P
S
R
-
E
----
Y
------
V
D
LEREAGKVYLKAP
M
---
I
L
---
N
----
G
V
---
C
V
I
W
K
-----
33
Fugue
40.59
39%
116
- C3 -
-
3CSQ
-
GP13_BPPH2
A:
[1-334]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MVYVSNKYLTMSEMKVNAQYILNYLSSNGWTKQAICGMLGNMQSESTINPGLWQNLDEGNTSLGFGLVQWTPASNYINWANSQGLPYKNMDSELKRIIWEVNNNAQWINLRDMTFKEYIKSTKTPRELAMIFLASYERPANPNQPERGDQAEYWYKNLSLQLAQFPMDIINISQGENGSFSHKGTLCIDFVGKTEKYPYYAPCDCTCVWRGDASAYLAWTSDKEVMCADGSVRYITWVNVHESPLPFDVGKKLKKGDLMGHTGIGGDH
W
H
F
N
V
I
-----
D
G
K
E
Y
Q
-
G
---------------------
W
T
-
K
K
--
P
-
D
S
C
L
---------------
A
G
T
--
E
---
L
----------------
H
-
I
Y
D
V
F
A
V
-
N
----
N
------
V
E
-------------
I
---
I
N
---
G
NGYD
W
K
---
T
S
D
W
Q
----
D
39
Fugue
40.42
20%
33
* C7 *
0.24
3IBM
-
?
A:
[8-161]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HEASRVLRERDYRWEGTEEESGARRQTLVGRPAGQEAPAFE
T
R
Y
F
E
V
-----
E
P
G
G
Y
T
-
T
----
L
E
------------------
R
H
--
E
-
H
T
H
V
-----
V
M
V
--
V
----
R
G
---
H
---
A
E
V
V
L
D
-----
D
-----
R
-
V
E
P
L
T
-
P
-
L
----
D
------
C
V
-------------
Y
---
I
A
---
P
----
H
A
---
W
H
Q
I
H
A
T
-
G
A
48
SP3
39.51
16%
75
* C9 *
-
1J75
-
ZBP1_MOUSE
A:
[10-66]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NLE
Q
K
I
L
Q
V
-----
L
S
D
D
G
G
-
P
----
V
K
---
I
G
Q
L
V
K
K
-----
C
Q
------------------
V
--
P
----
K
K
T
----------
L
N
-----
Q
-----
V
-
L
Y
--
R
L
K
-
K
----
E
-------
D
-------------
R
---
V
S
---
S
----
P
E
---
P
A
T
W
S
I
G
---
35
Fugue
39.21
27%
69
- C6 -
-
5FCE
-
?
A:
[2-116]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ENLSFTVKTDRIVYDMTQQVITIPVKPNKSVNASDVHAVLTYGWDGNGSSEKVIGEVYL
K
D
V
Q
W
T
-----
A
G
I
E
Y
T
-
I
M---
I
S
---
A
E
L
S
I
D
E
-----
I
K
-
S
K
--
D
-
K
V
D
L
-----
I
V
F
--
Y
----
D
G
Q
M-
T
---
I
T
E
------------------------------------------------------------
N
----
L
K
---
P
S
S
W
T
V
V
-
G
P
43
SP3
38.69
19%
54
- C7 -
0.13
1DWM
1
ICI_LINUS
A:
[1-69]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------S
R
R
C
--------
P
G
K
N
A
W
-
P
ELVG
K
S
---
G
N
M
A
A
A
T
-----
V
E
-
R
E
--
N
R
N
V
H
A
-----
I
V
L
--
K
----
E
G
S
--
A
---
M
--
T
K
D
-----
F
-----
R
-
C
D
R
V
W
V
I
-
V
----
N
------
D
H
----------------------
G
----
V
V
---
T
S
V
P
H
I
T
---
3
HHSearch
37.25
28%
-27
- C8 -
-
5TUU
-
E2F4_HUMAN
B:
[60-103]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
C
-----
F
A
-
G
---
D
-
T
L
L
A
-----
I
R
A
--
P
----
S
G
T
--
S
---
L
E
V
P
I
P
-----
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V
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P
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------------------------