@TOME V3
(Feb 2022)
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : BR29_103840T0_kcl77: (2019-03-28 )
NMIALSRSTLSRPRCNIIIYGLPSGRNQDRPVMGEADTALNSEVFITVRSGEKYRCTVKDDCDKPTCHELPPHLTYAG
Atome Classification :
(20 SA)
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------......-...10------------.--.....----..------------20--.----....-------------------------.-.-.-.30..-....----..40-...---------------.--...---------.----.---50..------..---....-.-60....-..-..70.----......
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
M
I
A
LS-RSTLS------------R--PR
C
N
I
----
I
I
------------
Y
---G----LPSG-------------------------R-N-Q-DRPVM-GEAD----TAL--N
S
E
---------------
V
--
F
I
T
---------V----R---S-G
E
------
K
Y
---
R
C
T
V-K-DDCDKP-
T
C
-HELPP----HLTYAG
9
Fugue
69.72
18%
-117
- C8 -
-
2MM2
-
?
A:
[1-65]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
C
T
A
----
N
I
------------
L
---------------------------------------
N
-
I
-
N
E
V
V
I
-
A
T
G
C
----
V
P
A
--
G
G
N
---------------
L
--
I
I
R
---------
V
----
G
---
S
-
D
H
------
S
Y
---
L
I
R
A
-
T
-
V
S
C
G
L
S
-
L
N
-
P
S
Q
S
F
INGE
S
L
A
S
G
G
51
SP3
68.48
20%
33
- C11 -
0.36
1FNG
-
HBB2_MOUSE
B:
[119-214]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RRVEPTVTVYPTKTQPLEHH
N
L
L
V
C
S
-
V
S
D
F
Y
------------
P
--
G
N
I
E
V
----
R
W
------------
F
---
R
------
N
G
-----------------------------
K
-
E
E
K
T
--
G
I
V
S
----
T
G
L
VR
N
G
D
WTFQ-----------
T
--
L
V
M
---------
L
ETVP
Q
---
S
-
G
E
------
V
Y
---
T
C
Q
V
-
E
H
P
S
L
T
D
P
-
V
T
-
V
E
W
------------
22
Fugue
60.34
19%
-4
* C10 *
-
2X47
-
MACD1_HUMAN
A:
[1-235]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TSTDWKEAKSFLKGLSDKQREEHYFCKDFVRLKKIPTWKEMAKGVARYKKDKQLN
E
K
I
S
L
L
-
R
S
D
I
T
------------
K
--
L
E
V
D
A
----
I
V
------------
N
---
A
ANSS
L
L
G
G
-------------------------
G
-
G
-
V
-
D
G
C
I
H
-
R
A
A
G
----
P
L
L
--
T
D
E
---------------
C
RT
L
Q
S
---------
C
----
K
---
T
-
G
K
------
A
K
---
I
T
G
G
-
Y
-
R
L
P
A
K
Y
-
V
I
-
H
T
V
G
P
----
I
A
Y
G
E
P
25
HHSearch
60.30
20%
-116
- C8 -
-
2MM0
-
?
A:
[2-58]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
C
V
A
----
N
I
------------
L
---------------------------------------
N
-
I
-
N
E
A
V
I
-
A
T
G
C
----
V
P
A
--
G
G
E
---------------
L
--
R
I
F
---------
V
----
G
---
S
-
S
H
------
S
Y
---
L
I
K
A
-
T
-
S
S
C
G
L
S
L
T
N
-
Q
V
F
I
N
----
G
E
S
V
--
44
SP3
58.43
16%
36
- C11 -
0.35
1HDM
-
DMB_HUMAN
B:
[3-185]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FVAHVESTCLLDDAGTPKDFTYCISFNKDLLTCWDPEENKMAPCNSLANVLSQHLNQKDTLMQRLNGLQNCAT
H
T
Q
P
F
W
-
G
S
L
T
N
------------
R
TR
P
P
-
S
V
----
Q
V
------------
A
---
K
----
T
T
P
F
NTREPVMLACYVWGFYPAEVTITWR
K
-
N
-
G
-
K
L
V
M
H
-
S
S
A
H
----
K
T
A
QP
N
G
D
WTYQTLSH-------
L
--
A
L
T
---------
P
----
S
---
Y
-
G
D
------
T
Y
---
T
C
V
V
-
E
H
I
G
A
P
E
P
-
I
L
-
R
D
W
T
P
----
G
-----
13
Fugue
57.99
18%
1
* C8 *
-
2X5R
-
?
A:
[1-124]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAMARVGPKIEITHGGKKYTVFSKVTHLVPRTENGEEAEYVVFGPEKEGVI
S
V
V
V
L
A
-
P
K
D
L
N
------------
E
--
E
A
L
A
L
----
R
V
------------
K
---
W
----
F
N
D
T
-------------------------
K
-
P
-
R
-
C
V
K
C
--
G
A
A
Y
----
N
G
K
--
N
H
F
---------------
R
--
V
V
A
---------
I
----
R
---
N
-
G
T
------
Y
Y
---
L
D
A
V
-
C
-
D
K
C
E
----------
P
----
R
I
T
W
L
S
15
Fugue
57.30
19%
47
- C5 -
-
2EHP
-
Y1627_AQUAE
A:
[3-126]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AIFTHEGKVEGVPGNYPLTAENLFRIGLALCTLWI
L
D
K
E
I
E
-
E
P
T
L
S
------------
I
--
P
E
T
N
F
----
V
T
------------
L
---
A
----
L
S
V
G
-------------------------
F
M
N
------
A
G
-
G
S
V
N
----
V
G
K
--
G
G
D
---------------
I
--
K
L
F
---------
L
----
Q
---
K
-
G
E
------
I
Y
---
V
L
E
F
-
Q
-
P
-
L
S
E
T
-
D
I
-
K
K
L
E
S
----
I
L
F
G
R
A
14
Fugue
54.55
16%
-6
- C5 -
-
5FX0
-
?
A:
[6-103]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HHVDDDD
K
M
I
E
M
I
-
A
T
T
M
S
------------
V
--
P
R
Q
V
E
----
V
T
------------
E
---
K
----
F
K
S
L
-------------------------
V
-
T
-
A
H
N
G
K
D
E
-
E
M
K
D
----
V
A
Q
--
D
M
K
---------------
N
--
Y
M
D
---------
E
----
K
---
Y
-
G
R
------
V
W
---
Q
C
V
I
L
T
-
G
S
Y
W
M
H
-
F
S
-
H
E
P
F
L
----
S
I
Q
F
R
Y
46
SP3
53.38
14%
72
- C11 -
0.42
1I4F
1
B2MG_HUMAN
B:
[1-100]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
I
Q
------------
R
--
T
P
-
K
I
----
Q
V
------------
Y
---
S
RHP-
A
E
N
G
KSNFLNCYVSGFHPSDIEVDLL---
K
-
N
G
E
-
R
I
E
K
V
-
E
H
S
D
----
L
S
F
--
S
K
D
WSFYLLYY-------
T
--
E
F
T
---------
P
----
T
---
E
-
K
D
------
E
Y
---
A
C
R
V
-
N
H
V
T
L
S
Q
P
-
K
I
-
V
K
W
D
R
----
D
M
----
45
SP3
53.38
14%
72
* C11 *
0.42
1I4F
1
B2MG_HUMAN
B:
[1-100]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
I
Q
------------
R
--
T
P
-
K
I
----
Q
V
------------
Y
---
S
RHP-
A
E
N
G
KSNFLNCYVSGFHPSDIEVDLL---
K
-
N
G
E
-
R
I
E
K
V
-
E
H
S
D
----
L
S
F
--
S
K
D
WSFYLLYY-------
T
--
E
F
T
---------
P
----
T
---
E
-
K
D
------
E
Y
---
A
C
R
V
-
N
H
V
T
L
S
Q
P
-
K
I
-
V
K
W
D
R
----
D
M
----
24
Fugue
52.48
23%
96
- C9 -
-
4RM6
-
HXUA1_HAEIN
A:
[2-817]
----------------------------------------------------------------------------------------ARDLPQGSSVVVGEANVSTIGNKMTIDQKTPTTQIDWHSFDIGQNKEVEFKQPDANSVAYNRVTGGNASQIQGKLTANGKVYLANPNGVIITQGAEINVAGLFATTKDLERISENNKFTRKLKDGQVVKEGQVINKGKIKAKDFVVLNGDKVINEGEIDATNNGKVYLSSGYNFTFTLSDSSISVALEDNAVQSIVQNEGIIKAGDITLNAKGRNQALDSLVMNNGVLEATKVSNKNGKVVLSADDVQLNNKSDIKGESEVVFTNENKI
K
I
T
S
Q
T
-
G
S
K
V
T
------------
S
--
P
K
I
N
F
TGKS
V
N
------------
I
---
N
----
G
D
F
G
-------------------------
R
-
D
-
D
-
S
K
A
H
Y
-
N
E
E
H
----
K
R
L
--
D
T
E
---------------
V
--
N
I
D
---------
V
----
P
---
D
-
N
E
------
N
I
---
R
I
A
E
-
K
-
D
N
T
D
-----------------
S
F
I
Q
17
Fugue
52.31
26%
-
- C5 -
-
4KNC
-
ALGX_PSEAE
A:
[41-463]
-----------------------------------------------------------------------GNLCPAAAYDSRYNTKYLGFFTHLVQAQDDWLFRTTYDLRTDFGTSAEGWRELRALRDELKRKGIELVVVYQPTRGLVNREKLSPAEKAGFDYELAKKNYLATIARFRQAGIWTPDFSPLFDEKEEHAYYFKGDHHWTPHGARRSAKIVAETLKQVPGFEEIPKKQFESKRVGLLSKLGTFHKAAAQLCGNSYATQYVDRFETEPVGNPQIALVGTSNSGPAYNFAGFLEEFSGADILNNAVSGGGFDSSLLAYMTSEEFHKNPPKILIWEFATHYDMAQKSFYRQ
A
M
P
L
V
D
-
N
G
C
S
G
------------
R
--
K
T
V
L
S
----
R
K
------------
V
---
K
----
L
R
Q
G
-------------------------
R
-
N
-----------------
E
V
L
--
L
N
S
---------------
A
--
A
L
P
---------
I
----
R
---
S
-
G
S
-------
Y
---
V
A
D
V
-
T
-
Y
S
--
D
P
-
S
V
-
H
E
L
K
N
----
T
I
W
Y
M
N
10
Fugue
50.20
13%
31
- C5 -
-
4IT6
7
?
A:
[6-122]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DWYVGTEWEDKNRGLAKKVI
G
L
Q
F
T
E
M
D
K
P
T
I
------------
I
--
S
T
V
E
F
----
S
V
NKKATNLGGRPS
K
---
Y
----
L
V
A
T
-------------------------
Y
-
P
-
Q
-
K
H
S
L
E
M
G
T
S
L
----
T
A
V
--
D
C
Y
---------------
L
--
E
L
L
---------
L
----
Q
QFV
P
-
G
E
------
T
A
---
A
C
S
I
-
T
-
T
K
T
G
E
R
-
I
E
-
F
E
L
K
L
----
E
K
I
V
--
20
Fugue
49.93
16%
-52
* C9 *
-
5CYA
-
TBCC_YEAST
A:
[101-268]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTLKKHYVLEKGDSAFENLEFCTVTSTTDYSGNSALSGSLCFRNITKCVINLQR
I
F
F
Q
T
G
-
S
I
F
I
T
------------
D
--
C
T
D
S
I
----
I
F
------------
L
---
R
----
S
P
S
--------------------------------
D
K
D
F
Q
-
I
R
L
R
----
D
L
K
--
N
C
K
---------------
I
--
L
I
E
---------
K
----
L
---
S
-
P
S
------
I
------------
D
C
K
Q
V
-
V
I
-
I
E
N
C
H
----
K
C
I
F
N
A
1
PsiBlast_PDB
49.50
32%
63
- C8 -
-
5JOZ
-
GH43B_BACO1
A:
[379-431]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
P
K
V
-------------------------
E
-
N
-
E
-
E
A
G
L
V
-
V
R
A
D
----
D
K
N
--
H
Y
D
---------------
L
--
L
I
T
---------
E
----
R
---
N
-
G
Q
------
R
V
AMI
R
K
T
L
-
K
-
D
K
V
V
D
T
-
T
C
-
K
E
L
P
-----------
47
SP3
48.62
20%
52
- C11 -
0.45
1JK8
1
DQA1_HUMAN
A:
[1-181]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VADHVASYGVNLYQSYGPSGQYSHEFDGDEEFYVDLERKETVWQLPLFRRFRRFDPQFAL
T
N
I
A
V
L
-
K
H
N
L
N
IVIKRSNSTAAT
N
--
E
V
P
E
V
----
T
V
------------
F
SKS
P
----
V
T
L
G
QPNTLICLVDNIFPPVVNITWL---
S
-
N
-
G
-
H
S
V
T
E
-
G
V
S
E
----
T
S
F
LS
K
S
D
HSFFKISY-------
L
--
T
F
L
---------
P
----
S
---
D
-
D
E
------
I
Y
---
D
C
K
V
-
E
H
W
G
L
D
E
P
L
L
K
-
H
W
E
P
E
----------
50
SP3
48.08
17%
37
- C7 -
-
1JW9
-
MOEB_ECOLI
B:
[2-248]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AELSDQEMLRYNRQIILRGFDFDGQEALKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQ
P
K
V
E
S
A
-
R
D
A
L
T
RI----------
N
--
P
H
I
A
I
----
T
P
------------
V
---
N
----
A
L
L
D
-------------------------
D
-
A
-
E
-
L
A
A
L
I
-
A
E
H
D
LVLD
C
T
D
--
N
V
A
VRNQLNAGCFAAKVP
L
--
V
S
G
---------
A
----
A
---
I
-
R
M
------
E
G
---
Q
I
T
V
-
F
-
T
Y
Q
D
G
E
-
P
C
Y
R
C
L
S
R
----
L
F
G
E
A
G
23
Fugue
47.16
21%
4
- C5 -
-
1JEI
-
EMD_HUMAN
A:
[1-53]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
N
-
Y
A
D
L
S
------------
D
--
T
E
L
T
T
----
L
L
RR----------
Y
---
N
----
I
P
H
G
---------------------------------
P
V
V
-
G
S
T
R
----
R
L
Y
--
E
K
K
---------------
I
--
F
-------------------------------------------
E
Y
E
T
Q
-
R
R
-
R
L
S
P
P
----
S
S
S
---
32
HHSearch
46.70
27%
28
- C6 -
-
2C4B
6
RNBR_BACAM
B:
[81-140]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
F
-------------------------
R
-
N
-
S
-
D
R
I
L
Y
-
S
S
D
-----------
W
L
---------------
I
--
Y
K
T
TDAYQTFTK
I
----
R
---
S
S
S
M
GVCPKI
L
K
---
K
C
R
R
-
D
-
S
D
C
-
L
A
-
G
C
-
V
C
G
P
N
----
G
F
----
18
Fugue
44.42
20%
52
* C7 *
-
5DFM
2
MALE_ECOLI
A:
[1-527]
KIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKVNYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDAAL
A
A
A
Q
T
N
-
A
A
A
M
Q
------------
Q
--
P
K
R
N
F
----
D
L
------------
Y
---
K
----
L
I
T
D
-------------------------
K
-
Q
-
I
-
D
F
Q
V
A
-
D
L
I
Q
----
D
E
Q
--
S
S
-------------------
F
V
S
---------
V
----
R
---
I
-
Y
G
------
Q
F
---
K
C
F
V
-
P
-----
K
S
-
T
I
-
Q
E
Q
L
D
----
K
I
K
N
L
K