@TOME V3
(Feb 2022)
Ref.
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : Bd8401_067010T0_kcl52: (2019-03-29 )
RLYDCRVAIWQPPMDSRTTVETLAEATHFNLGESVRVLRGRFTCKAEQKCGNVICNLPEGYKYQSI
Atome Classification :
(20 SA)
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------........---.10--.-----.------.--....--.20..-...-..---------.30..-.-----.....-.--------40----------..------.....-..50--.---....--..-.60.....
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------R
L
Y
D
C
R
V
A
---
I
WQ--P-----P------M--DS
R
T
--
T
V
E
T
L
-
A
E
A
-TH---------FN-L
G
-
E
-----
S
V
R
V
L
-R--------
G
-----------
R
F
------
T
C
K
A
E
-QKC
G
--
N
---
V
I
CN--LP-EGYKYQSI
39
Fugue
65.08
25%
40
- C6 -
-
1JDC
-
?
?:
[358-418]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RADSAISFH
S
G
Y
S
G
L
V
A
---
T
V
S
--
G
-----
S
------
Q
----------
Q
T
L
-
V
V
A
-
L
N
---------
S
D
-
L
G
-
N
-----
P
G
Q
V
A
-
S
--------
G
-----------
S
F
------
S
E
A
V
N
-
A
S
N
G
--
Q
---
V
R
V
W
--
R
S
---------
34
Fugue
64.27
28%
26
* C11 *
-
4OGE
2
CAS9_ACTNH
A:
[10-1101]
HHLRVGIDVGTHSVGLATLRVDDHGTPIELLSALSHIHDLSGIARRARRLLHHRRTQLQQLDEVLRDLGFPIPSMAVRHIARHRGWRNPYSKVESLLSPAEESPFMKRKICARQGVSPDVCKQLLRAVFKADSPRGSAVSRVAPDPLPGQGSFRRAPKCDPEFQRFRIISIVANLRISETKGENRPLTADERRHVVTFLTEDSQADLTWVDVAEKLGVHRRDLRGTAVHTRSAARPPIDATDRIMRQTKISSLKTWWEEADSEQRGAMIRYLYEDPTDSECAEIIAELPEEDQAKLDSLHLPAGRAAYSRESLTALSDHMLATTDDLHEARKRLFGVDDSWAPPAEAINAPVGNPSVDRTLKIVGRYLSAVESMWGTPEVIHVEHVRDGFTSERMADERDKANRRRYNDNQEAMKKIQRDYGKEGYISRGDIVRLDALELQGCACLYCGTTIGYHTCQLDHIVPQAGPGSNNRRGNLVAVCERCNRSKSNTPFAVWAQKCGIPHVGVKEAIGRVRGWRKQTSSEDLTRLKKEVIA
R
L
R
R
T
Q
E
------
D
--
P
-----
E
------
I
--
D
E
R
S
ME
S
V
A
W
M
-
A
N
E
-
L
H
---------
H
R
-
I
A
-
A
AYPET
T
V
M
V
Y
-
R
--------
G
-----------
S
I
------
T
A
A
A
R
-
K
A
A
G
ID
S
---
R
I
N
L
--
I
G
-
E
K
G
R
K
D
R
I
17
HHSearch
63.71
24%
-58
- C5 -
-
5LKK
3
?
A:
[179-235]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
---
Q
W
E
--
L
-----
P
------
N
YS
G
E
L
T
--
L
N
M
N
L
-
A
P
P
-
V
A
---------
P
N
F
P
G
-
E
-----
Q
L
L
F
F
-
R
--------
S
-----------
F
V
------
P
C
S
G
G
-
Y
N
Q
G
--
I
---
I
D
C
L
--
I
P
-
Q
E
W
-----
46
Fugue
62.37
21%
48
- C9 -
0.26
3WX4
-
ARN_BPT4
A:
[1-98]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MIIDSQSV
V
Q
Y
T
F
K
I
D
---
I
L
E
--
K
LYKFL
P
------
N
--
L
Y
H
S
--
I
V
N
E
L
-
V
E
E
-
L
H
---------
L
E
-
N
N
-
D
--------
F
L
-
I
--------
G
-----------
T
Y
--------
K
D
L
-
S
K
A
G
--
Y
---
F
Y
V
I
--
P
A
-
P
G
K
N
I
D
D
V
45
Fugue
59.16
18%
12
* C6 *
-
3IC8
-
?
A:
[2-310]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SELILHHYPTSLFAEKARLMLGFKGVNWRSVTIPSIMPKPDLTALTGGYRKTPVLQIGADIYCDTALMARRLEQEKASPAFYPQGQEFAVAGLAAWADSVLFLHAVSLVFQPESMPVEQVKHQWPTFMSRLESQLSHGGDFLFGAPSIADFSVAHTLWFLKQTPVTAPFVDDYPSVSVWLDRVLGFGHGSLSDLSSAAAIEIASNATPAPLPDETFIDPNG
F
K
A
G
D
K
V
A
---
I
A
A
--
V
-----
D
------
Y
--
G
V
E
A
--
V
E
G
E
L
M
F
T
G
-
R
----------------
E
-----
E
L
I
L
R
-
R
--------
E
-----------
D
-------------
N
R
A
G
--
V
---
V
H
V
H
--
F
P
R
L
G
F
R
V
E
K
R
33
Fugue
57.53
15%
-79
- C6 -
-
1SQR
-
RL35A_PYRFU
A:
[1-87]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
R
I
K
G
V
V
L
---
S
Y
R
--
R
-----
S
------
K
--
E
N
Q
H
--
N
N
V
M
I
-
I
K
P
-
L
D
---------
V
N
-
S
R
-
E
-----
E
A
S
K
L
-
I
--------
G
RLVLWKSPSGK
I
L
------
K
G
K
I
V
-
R
V
H
G
--
T
KGA
V
R
A
R
--
F
E
-
K
G
L
P
G
Q
A
L
25
SP3
57.20
22%
92
- C9 -
0.27
1J5Y
-
NIAR_THEMA
A:
[16-79]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KTVRQE
R
L
K
----
S
---
I
V
R
--
I
-----
L
------
E
--
R
S
K
E
PV
S
G
A
Q
L
-
A
E
E
---------------
L
S
-
V
-----
S
R
Q
V
I
-
V
--------
Q
-------------------
D
I
A
Y
L
-
R
S
L
G
--
Y
---
N
I
V
A
--
T
P
-
R
G
Y
V
L
A
G
G
35
Fugue
55.96
15%
31
- C6 -
-
5I99
1
A:
[1-398]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PGSAPDFSRNPMKKMVQVQVGSLVILDCKP
R
A
S
P
R
A
L
S
---
F
W
K
KG
D
-----
M
------
M
--
V
R
E
Q
--
A
R
V
S
F
-
L
N
D
-
G
G
---------
L
K
-
I
M
-
N
-----
V
T
K
A
D
-
A
--------
G
-----------
T
Y
------
T
C
T
A
E
-
N
Q
F
G
---------------
K
A
N
G
T
T
H
L
2
PsiBlast_PDB
49.98
34%
-46
- C9 -
0.07
2GBZ
-
ORN_XANCP
A:
[71-113]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
S
G
---
L
W
Q
--
R
-----
V
------
L
--
D
S
Q
V
--
T
H
A
Q
A
-
E
A
Q
-
T
V
---------
A
F
-
L
G
-
E
-----
W
I
R
---------------------------------
A
G
A
S
-
P
M
C
G
--
N
---
S
I
C
--------------
27
SP3
48.47
19%
62
- C6 -
-
1TOC
-
ORNT_ORNMO
R:
[57-119]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
H
S
S
E
M
H
SSC
L
G
D
--
P
-----
P
------
T
--
S
C
A
E
--
G
-----
T
D
I
-
T
Y
---------
Y
D
-
S
D
S
K
-----
T
C
K
V
L
-
A
--------
A
SCPSG------
E
N
------
T
F
E
S
E
-
V
E
C
---
Q
---
V
A
C
G
--
A
P
I
E
G
------
41
Fugue
47.43
16%
3
* C9 *
0.13
1ZKE
-
Y1531_HELPY
A:
[3-83]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
F
E
K
I
R
K
---
I
L
A
--
D
-----
I
------
E
--
D
S
Q
N
--
E
I
E
M
L
-
L
K
L
-
A
N
---------
L
S
-
L
G
-
D
-----
F
I
E
I
K
-
R
--------
G
-----------
S
M
DMPKGV
N
E
A
F
F
-
T
Q
L
S
--
E
---
E
V
E
R
--
L
K
-
E
L
I
N
A
L
N
K
1
PsiBlast_PDB
45.42
41%
15
- C12 -
-
2FEW
-
A:
[57-90]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
G
-
E
-----
S
I
A
V
P
-
Q
--------
G
-----------
T
V
------
E
A
K
D
R
V
L
K
T
G
--
V
---
V
F
C
Q
--
Y
P
-
E
G
V
R
F
---
36
Fugue
45.09
15%
-5
- C7 -
-
1VQ3
-
PURS_THEMA
A:
[-3-82]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HL
P
L
F
K
F
A
I
D
---
V
Q
Y
--
R
-----
S
------
N
--
V
R
D
P
--
R
G
E
T
I
-
E
R
V
-
L
R
EEKGLPVKK
L
R
-
L
G
-
K
-----
S
I
H
L
E
-
V
EAENK---
E
-----------
K
A
------
Y
E
I
V
K
-
K
A
C
E
--
E
---
L
L
V
N
P-
V
V
-
E
E
Y
E
V
R
E
L
28
SP3
43.98
10%
22
* C7 *
-
1WAP
2
MTRB_BACSU
A:
[8-75]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DFVVI
K
A
V
E
D
G
V
N
---
V
I
G
--
L
-----
T
------
R
--
G
T
D
T
--
K
---
F
-
H
H
S
-
E
K
---------
L
D
-
K
G
-
E
-----
V
I
I
A
Q
-
F
--------
T
-----------
E
H
------
T
S
A
I
K
-
V
R
-
G
--
E
---
A
L
I
Q
--
T
A
-
Y
G
E
M
K
S
E
K
40
Fugue
43.07
14%
98
- C7 -
-
3IUW
-
?
A:
[5-83]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QHPTI
H
T
L
K
I
E
T
E
---
F
F
K
--
A
-----
V
------
K
--
E
R
R
K
--
T
F
E
I
R
-
K
N
D
-
R
N
---------
F
Q
-
V
G
-
D
-----
I
L
I
L
E
-
E
YMNGMYLD
D
-----------
E
C
------
E
A
E
V
I
-
Y
I
T
D
--
Y
------
A
--
Q
R
-
E
G
Y
V
V
L
G
I
23
SP3
40.84
13%
73
- C9 -
0.14
1TC3
-
TC3A_CAEEL
C:
[1-51]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
------
R
--
G
S
A
L
--
S
D
T
E
R
-
A
Q
L
D
V
M
---------
K
L
-
L
N
-
V
-----
S
L
H
E
M
-
S
--------
R
-----------
K
I
--------
S
R
S
-
R
H
C
I
--
R
---
V
Y
L
K
--
D
P
-
V
S
Y
G
T
S
--
29
SP3
39.92
13%
-96
- C9 -
-
1ERD
-
?
?:
[1-40]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
P
M
T
--
C
E
Q
A
M
-
A
S
C
-
E
H
---------
T
M
-
C
G
-
Y
---------
C
-
Q
--------
G
-----------
P
L
------
Y
M
T
C
I
-
G
I
T
T
--
D
---
P
E
C
G
--
L
P
---------
32
SP3
37.91
12%
35
- C7 -
-
1ELV
-
A:
[2-91]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
D
C
G
-------
I
--
P
-----
E
SIENGK
V
--
E
D
P
E
--
S
T
L
F
G
-
S
V
I
-
R
Y
---------
T
C
-
E
E
-
P
-----
Y
Y
Y
M
E
G
G
--------
G
-----------
E
Y
------
H
C
A
G
N
-
G
S
W
V
--
N
---
E
V
L
G
PE
L
P
-
K
C
V
P
V
---
44
Fugue
34.38
16%
-
- C9 -
3TUL
-
SIPB_SALTY
D:
[83-226]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GQLTLLLGKLMTLLGDVSL
S
Q
L
E
S
R
L
A
---
V
W
Q
--
A
M----
I
------
K
--
E
F
Q
T
--
A
L
G
E
A
-
Q
E
A
-
T
D
---------
L
Y
-
E
A
-
S
-----
I
K
K
T
D
-
T
--------
A
-----------
K
S
------
V
Y
D
A
A
-
T
K
K
L
--
T
---
Q
A
Q
N
--
K
A
-
Q
A
E
A
A
V
E
Q
38
Fugue
33.13
12%
25
- C9 -
0.19
5AJD
-
NOT4_YEAST
B:
[420-469]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Y
--
D
A
L
G
--
N
A
V
D
F
-
L
D
A
-
R
L
---------
H
S
-
L
S
-
N
-----
Y
---
Q
-
K
--------
R
-----------
P
I
------
S
I
K
S
N
-
I
I
D
E
--
E
---
T
Y
K
K
--
Y
P
-
S
L
F
S
W
D
K
I