@TOME V3
(Feb 2022)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
3D Alignment Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
3D Alignment Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
PDB Ligands
Affinity Score
Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
Sequence Alignment
Tab of Complexes
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : CH1907_108850T: (2019-03-29 )
PWEWVTWKDFCRLTLKKGDEIQSQSKWVAKPGPIGILIQPGVYESFKTDKDCNPKIRRGKLPDGYTLHGQVF
Atome Classification :
(20 SA)
---------------------------------------------------------------------------------------------------------------------------------------------.--.....---...10.---......---.---20........------30..-....-----------..40...--.....--.50.-.--.----.----..------.-.-60.-..--.-...------.70.
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
---------------------------------------------------------------------------------------------------------------------------------------------P--WEWV
T
---
W
K
D
F
C
R
---
L
T
LKKG---D---EIQSQSKWVA------KPG
P
-
I
G
I
L
-----------IQP-GV
Y
--
E
SFKT--DKDC-N--P----K----IR------R-G-KLP-D
G
--
Y
-
T
LH------GQVF
24
SP3
73.97
18%
62
- C8 -
-
1WLF
-
PEX1_MOUSE
A:
[11-177]
-----------------------------------------------GGAVVTVAFTNARDCFLHLPRRLVAQLHLLQNQAIEVASDHQPTYLSWVEGRHFNENVAEINRQVGQKLGLSSGDQVFLRPCSHVVSCQQVEVE
P
-----
L
S
---
A
D
D
W
E
I
---
L
E
L
H
A
I
SLE
Q
---
H
L
L
D
Q
I
R
I
V
F
------
P
K
A
V
-
V
P
I
W
-----------
V
D
Q
-
Q
T
Y
--
I
F
I
Q
I
--
V
T
-
L
-
M
--
P
----
A
----
A
P
------
Y
-
G
-
R
L
E
-
T
N
--
T
-
K
L
L
------
I
Q
P
-
35
Fugue
67.63
22%
33
- C8 -
-
5J4F
-
?
A:
[22-119]
-------------------------------------------------------------------------------------------------------------------------------EVVHFLEGVCFEKL
H
--
I
E
V
L
N
ENS
S
H
K
E
I
R
---
I
C
M
P
K
G
---
A
---
V
M
D
K
H
K
A
----------
P
G
A
-
I
S
V
Q
-----------
V
L
E
-
G
K
I
--
V
F
E
V
G
--
D
------------------
E
------
K
-
I
-
E
M
P
-
K
G
AL
I
-
S
L
E
------
A
Q
V
L
45
Fugue
66.51
18%
49
- C7 -
-
3HLK
-
ACOT2_HUMAN
A:
[58-472]
-------------------------------------------------------------------------------------------------------------RVPARMAATLILEPAGRCCWDEPVRIAVRGLA
P
--
E
Q
P
V
T
---
L
R
--
A
S
---
L
R
D
E
K
G
---
A
---
L
F
Q
A
H
A
R
Y
R
A
D-----
T
L
G
E
-
L
D
L
E
RAPALGGSFAG
L
E
P
M
G
L
L
--
W
A
L
E
P
--
E
K
P
--
L
--
V
----
R
----
L
V
------
K
-
R
-
D
V
R
-
T
P
--
L
-
A
V
E
------
L
E
V
L
33
Fugue
65.26
12%
-78
* C8 *
-
2MM2
-
?
A:
[1-65]
-----------------------------------------------------------------------------------------------------------------------------------------------------------
N
C
T
---
A
N
I
L
N
I
---
N
---
E
V
V
I
A
T
G
C
V
P
------
A
G
G
N
-
L
I
I
R
-----------
V
G
S
-
D
H
S
--
Y
L
I
R
A
--
T
V
S
C
-
G
--
L
----
S
----
L
N
------
P
-
S
Q
S
F
I
-
N
G
--
E
-
S
L
A
------
S
G
G
R
28
SP3
62.21
23%
100
- C3 -
-
1YF2
-
T1S1_METJA
A:
[1-425]
-----------------------------------------------------------------------------------------------------------------------------MFYKEENFKKTEIGEI
P
ED
W
E
I
V
E
---
L
K
D
V
C
K
---
K
-
I
K
A
G
---
G
---
T
P
K
T
S
V
E
E
Y
Y
------
K
N
G
T
-
I
P
F
V
KIED-------
I
T
N
-
S
N
K
--
Y
L
T
N
T
--
K
I
K
I
-
T
--
E
EGLN
N
----
S
N
------
A
-
W
-
I
V
P
-
K
N
--
S
-
V
L
F
AMYGSI
G
E
T
A
40
Fugue
60.40
16%
98
- C6 -
5V0S
-
?
A:
[1-69]
--------------------------------------------------------------------------------------------------------------------------------------HDLYVDV
L
--
D
K
V
G
A
---
L
A
H
V
T
S
---
I
L
A
R
E
E
---
I
---
S
I
T
N
L
Q
I
L
E
A
------
R
E
G
L
-
L
G
V
L
-----------
R
I
S
--------
F
Q
R
--
E
E
D
R
M
K
--
A
----
K
----
L
A
------
L
-
G
-
E
---
E
K
--
Y
-
Q
T
Y
----------
47
Fugue
59.34
16%
-17
- C6 -
0.26
3B4Q
-
?
A:
[4-93]
---------------------------------------------------------------------------------------------------------------------------------------------
L
--
N
S
A
P
T
---
P
R
D
V
V
A
N--
A
P
A
P
V
Q
---
A
---
A
V
A
G
A
Q
E
Y
A
A
------
Q
A
G
L
N
T
E
E
L
-----------
A
V
D
-
A
L
Y
--
N
A
I
K
V
--
R
L
A
G
-
G
IP
P
----
Q
----
I
E
AFYQAN
R
-
T
-
N
F
N
-
G
F
--
Y
M
A
N
R
------
G
A
I
D
34
Fugue
59.02
24%
21
* C5 *
-
2OH5
3
?
A:
[2-248]
-------------------------------------------------------------ADVAGTSNRDFRGREQRLFNSEQYNYNNSLNGEVSVWVYAYYSDGSVLVINKNSQYKVGISETFKALKEYRKGQHNDSYD
E
--
Y
E
V
N
Q
---
S
I
Y
Y
-------
P
N
G
G
---
D
---
A
R
K
F
H
S
N
--
A
------
K
P
R
A
-
I
Q
I
I
-----------
F
S
P
-
S
V
N
--
V
R
T
I
K
--
M
A
K
G
-
N
--
A
----
V
----------------
S
V
P
-
D
E
--
Y
-
L
Q
R
------
S
H
P
W
42
Fugue
58.99
26%
58
* C7 *
-
3SHS
-
?
A:
[2-304]
------------------------------------------------------------------------------AFTVSIQSNKRCFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHENNTATLTVADATSENA
G
--
S
Y
K
V
T
---
V
Q
D
T
D
T
---
M
T
-----------
S
V
E
S
E
V
F
L
M
E
------
E
A
E
L
-
I
V
N
I
-----------
T
E
P
Q
H
F
Y
--
V
S
S
Q
T
--
D
V
E
L
-
H
--
A
----
T
----
V
K
FS----
G
-
G
-
K
T
P
A
D
N
--
Y
-
E
L
H
------
Y
S
W
S
36
Fugue
52.02
12%
13
- C4 -
-
5T5I
-
?
G:
[2-81]
---------------------------------------------------------------------------------------------------------------------------------------------
A
--
I
G
L
K
A
---
Y
P
E
L
C
H
GCG
N
C
V
I
A
C
---
P
---
V
N
A
L
R
S
P
E
V
A
GGKGPT
D
D
V
E
-
I
I
M
I
-----------
V
E
D
-
G
V
V
--
N
I
K
N
P
--
D
L
C
G
-
K
--
C
----
G
----
T
C
------
V
-
E
-
S
C
P
-
V
D
--
A
-
I
R
L
------
E
E
L
-
41
Fugue
48.84
21%
-51
- C6 -
0.18
1PYV
-
ATPBM_NICPL
A:
[1-53]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
S
R
---
R
---
L
L
A
S
L
L
R
Q
S
A
------
Q
R
G
---
G
G
L
-----------
I
S
R
-
S
L
G
--
N
S
I
P
K
--
S
----
A
--
S
----
R
----
A
S
------
S
-
R
-
A
S
P
-
K
G
--
F
-
L
L
N
------
R
A
V
Q
10
HHSearch
47.25
31%
56
* C10 *
-
6B7L
-
?
A:
[8-49]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
A
------
K
R
V
P
-
L
-
A
L
-----------
P
E
A
-
G
L
Y
--
Q
A
N
L
M
--
S
R
D
G
-
D
--
K
----
A
----
T
P
------
R
M
I
-
K
D
L
-
D
G
--
L
-
A
L
-----------
26
SP3
42.47
12%
49
- C6 -
0.41
1C8U
1
TESB_ECOLI
A:
[115-285]
----------------------------------------------------------------------------------------------------------------------------------EHQKTMPSAPA
P
--
D
G
L
P
S
---
E
T
Q
I
A
Q
---
S
L
A
H
L
L
---
P
---
P
--
V
L
K
D
K
F
I
------
C
D
R
P
-
L
E
V
R
P----------
V
E
F
-
H
N
P
--
L
K
-----
G
H
V
A
-
E
--
P
----
H
RQVW
I
R
A-----
N
-
G
-
S
V
P
-
D
D
--
L
-
R
V
H
------
Q
Y
L
L
32
SP3
41.61
12%
3
- C5 -
-
1GCY
-
AMT4_PSEST
A:
[1-418]
------------------------------------------------------------------------------------------------------------------------DQAGKSPNAVRYHGGDEIILQ
G
--
F
H
W
N
V
---
V
R
E
---------
A
P
N
---
D
WYN
I
L
R
Q
Q
A
A
T
I
A
------
A
D
G
F
-
S
A
I
W
-----------
M
P
V
--
P
W
--
R
D
F
S
S
--
W
S
K
S
-
G
--
G
----
G
------------
E
-
G
-
Y
F
W
-
H
D
--
F
-
N
K
N
------
G
R
-
Y
30
SP3
41.61
12%
3
- C5 -
-
1GCY
-
AMT4_PSEST
A:
[1-357]
------------------------------------------------------------------------------------------------------------------------DQAGKSPNAVRYHGGDEIILQ
G
--
F
H
W
N
V
---
V
R
E
---------
A
P
N
---
D
WYN
I
L
R
Q
Q
A
A
T
I
A
------
A
D
G
F
-
S
A
I
W
-----------
M
P
V
--
P
W
--
R
D
F
S
S
--
W
S
K
S
-
G
--
G
----
G
------------
E
-
G
-
Y
F
W
-
H
D
--
F
-
N
K
N
------
G
R
-
Y
48
Fugue
40.72
29%
-
* C6 *
0.19
4XPM
-
MEH1_YEAST
A:
[146-184]
-------------------------------------------------------------------------------------------------------------------------------------------SP
D
--
S
A
K
I
S
---
K
E
Q
L
K
K
---
L
H
S
N
I
L
---
N
---
E
I
F
S
Q
S
Q
-
V
N
------
K
P
G
P
-
L
T
V
P
-----------
F
--------------------------------------------------------------------
23
SP3
40.68
16%
152
- C6 -
0.25
1SQF
-
RSMB_ECOLI
A:
[5-429]
RNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAIAIKRPQLKGLINGVLRQFQRQQEELLAEFNASDARYLH
P
---
S
W
L
----
L
K
R
L
Q
K
---
A
---
Y
P
---
E
---
Q
W
Q
S
I
V
E
A
N
N
------
Q
R
P
P
-
M
W
L
R
-----------
I
N
R
-
T
H
H
SR
D
S
W
L
A
LL
D
E
A
G
-
M
--
K
----
G
----
F
P
------
H
-
A
-
D
Y
P
-
D
A
--
V
-
R
L
E
------
T
P
A
P
37
Fugue
40.07
11%
-9
- C6 -
-
4HB1
-
?
?:
[58-105]
---------------------------------------------------------------------------------------------------------------------------------------------------------
E
E
L
L
K
---
Q
A
L
Q
Q
A
---
Q
---
Q
L
L
Q
Q
A
Q
E
L
A
------
K
E
E
L
-
L
K
Q
A
-----------
L
Q
Q
-
A
Q
Q
--
L
L
Q
Q
A
--
Q
E
L
--------------------------------------------------
15
HHSearch
37.23
29%
-34
* C9 *
-
2V4X
-
A:
[52-75]
----------------------------------------------------------------------------------------------------------------------------------------------------
D
---
W
K
Q
T
A
R
---
A
C
L
S
G
G
---
D
---
Y
L
L
W
K
S
E
F
F
E
-----------------------------------------------------------------------------------------------
6
HHSearch
36.97
25%
-38
- C9 -
-
2KGF
-
A:
[57-80]
----------------------------------------------------------------------------------------------------------------------------------------------------
D
---
W
N
T
L
V
R
---
A
V
L
S
G
G
---
D
---
H
L
L
W
K
S
E
F
F
E
-----------------------------------------------------------------------------------------------