@TOME V2.3
(Mar 2018)
Ref.
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : M_BR29_EuGene_00119511: (2018-03-14 )
KCVIKRVFSDGSSVKIPAQPAQSTTISKQAVWVYGNCQPFPVVLNDGSKLSGEIETPAVTPVES
Atome Classification :
(20 SA)
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.....---.--...10.--....-...-20.------...---...-----.--.30....-..-..-.40-------.------....------.---...50--------.....-------..----------.60...
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------K
C
V
I
K
---
R
--VFSDGS--
S
V
K
I-PAQ-P-A------QST---TIS-----
K
--
Q
A
-
V
W
V
Y-GN-
C
Q
-
P
F
--------
P
------
V
V
LN------D---GSKLS--------GEIET-------PA----------VTPVES
2
HHSearch
68.31
37%
42
- C10 -
-
2MYV
-
?
A:
[25-88]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
C
I
I
Q
---
R
---
Y
K
D
G
D
--
V
N
N
I
Y
T
A
N
-
R
-
N
------
E
E
I
---
T
I
E
-----
E
--
Y
K
-
V
F
V
N
-
E
A
-
C
H
-
P
Y
--------
P
------
V
I
L
P
------
D
---
R
S
V
L
S
--------
G
D
F
T
S
-------
A
Y
----------
A
D
D
D
E
S
1
PsiBlast_PDB
65.85
35%
29
- C10 -
-
2MYV
-
?
A:
[26-88]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
C
I
I
Q
---
R
---
Y
K
D
G
D
--
V
N
N
I
Y
T
A
N
-
R
-
N
------
E
E
I
---
T
I
E
-----
E
--
Y
K
-
V
F
V
N
-
E
A
-
C
H
-
P
Y
--------
P
------
V
I
L
P
------
D
---
R
S
V
L
S
--------
G
D
F
T
S
-------
A
Y
----------
A
D
D
D
E
S
52
SP3
60.94
28%
0
- C- -
-
1FJG
-
RS19_THET8
S:
[2-85]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PRSLKKGVFVDDHLLE
K
--
V
L
---
E
--
L
N
A
K
G
E
--
K
R
L
I
-
K
T
W
-
S
-
R
------
R
S
T
IVP
E
M
V
-----
G
--
H
T
-
I
A
V
Y
N
G
K
--
Q
-
H
V
--------
P
------
V
Y
I
T
------
E
NMV
G
H
K
L
---------
G
E
F
-
A
-------
P
T
----------
R
T
Y
R
G
H
34
Fugue
54.06
27%
-30
- C12 -
-
5LRT
5
DOP_ACIC1
A:
[1-500]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
H
---
R
--
V
M
G
I
E
T
EY
G
I
S
V
-
P
H
Q
-
P
N
A
------
N
A
M
---
A
A
S
-----
S
--
Q
V
-
V
N
A
Y
-
A
P
I
G
A
-
P
A
--------
Q
GLAN--
V
I
L
T
------
N
---
G
A
R
L
Y
--------
V
D
H
A
H
-------
P
E
----------
Y
S
T
P
E
V
49
SP3
51.93
21%
-24
- C10 -
-
1TYG
-
THIS_BACSU
B:
[22-86]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
L
Q
------
L
--
N
G
K
--
D
V
K
W
-
K
K
D
-
T
-
G
TIQDLL
A
S
Y
---
Q
L
E
-----
N
--
K
I
-
V
I
V
E
-
R
N
-
K
E
-
I
I
--------
G
KERYHE
V
E
L
C
------
D
---
R
D
V
I
----------
E
I
---------------------
V
H
F
V
G
G
47
SP3
47.50
23%
80
- C10 -
-
1QUB
-
APOH_HUMAN
A:
[244-319]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SC
K
V
P
V
K
---
K
AT
V
V
Y
Q
G
E
--
R
V
K
I
-
Q
E
K
-
F
-
K
------
N
G
M
---
L
H
G
-----
D
--
K
V
-
S
F
F
C
-
K
N
-
K
E
-
K
K
--------
C
------
S
Y
T
E
------
D
---
A
Q
C
I
D
--------
G
T
I
E
V
-------
P
K
CFKEHTDASD
V
K
P
C
--
7
HHSearch
47.06
23%
-28
- C13 -
-
1XS0
-
IVY_ECOLI
C:
[37-84]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
Y
T
-
P
-
A
------
Q
T
V
---
T
L
G
-----
D
--
E
T
-
Y
Q
V
M
-
S
A
-
C
K
-
P
H
DCGSQRIA
V
------
M
W
S
E
------
K
---
S
N
Q
M
T
--------
G
L
F
S
T
-------------------------
44
SP3
46.26
18%
-60
- C14 -
-
1EXT
-
TNR1A_HUMAN
A:
[106-162]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
C
S
L
---------
C
L
N
G
--
T
V
H
L
-
S
C
Q
-
E
-
K
------
Q
N
T
---
V
C
T
-----
C
--
H
A
G
F
F
L
R
-
E
N
--------------
E
------
C
V
S
C
------
S
---
N
C
K
K
S
--------
L
E
C
T
K
-------
L
C
----------
L
P
Q
I
E
N
15
HHSearch
45.95
23%
-
- C- -
-
4PS6
-
IVY_PSEAE
A:
[63-110]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
S
S
-
P
-
S
------
T
S
L
---
S
L
E
-----
G
--
Q
P
-
Y
V
L
A
-
N
S
-
C
K
-
P
H
DCGNNRL-
L
V-----
A
F
R
G
------
D
---
K
S
A
A
Y
--------
G
L
Q
V
S
-------------------------
6
HHSearch
45.37
23%
-15
- C13 -
-
1XS0
-
IVY_ECOLI
A:
[37-84]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
Y
T
-
P
-
A
------
Q
T
V
---
T
L
G
-----
D
--
E
T
-
Y
Q
V
M
-
S
A
-
C
K
-
P
H
DCGSQRIA
V
------
M
W
S
E
------
K
---
S
N
Q
M
T
--------
G
L
F
S
T
-------------------------
53
SP3
44.60
26%
116
* C10 *
-
1WM2
-
SUMO2_HUMAN
A:
[12-89]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TENND
H
I
N
L
K
---
V
--
A
G
Q
D
G
S
--
V
V
Q
F
-
K
I
K
-
R
---------
H
T
---
P
L
S
-----
K
LM
K
A
----
Y
----
C
E
-
R
Q
--------
G
------
L
S
M
R
QIRFRF
D
---
G
Q
P
I
N
--------
E
T
-
D
T
-------
P
A
----------
Q
L
E
M
E
D
21
HHSearch
44.16
39%
-240
- C8 -
-
2CME
1
?
H:
[12-34]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Q
L
---
T
I
T
-----
D
--
P
K
-
V
-----------
Y
--------
P
------
I
I
L
R
------
L
---
G
S
N
L
S
--------
L
S
----------------------------
38
Fugue
42.83
18%
4
* C14 *
-
1EXT
-
TNR1A_HUMAN
A:
[106-162]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
C
S
L
---------
C
L
N
G
--
T
V
H
L
-
S
C
Q
-
E
-
K
------
Q
N
T
---
V
C
T
CH---
A
--
G
F
-
F
L
R
E
-
N
E
-
C
V
-
S
-------------------
C
------
S
---
N
C
K
K
S
--------
L
E
C
T
K
-------
L
C
----------
L
P
Q
I
E
N
41
Fugue
41.17
33%
24
* C12 *
-
5T5I
3
?
A:
[1-569]
MEYIIKNGFVYCPLNGVDGEKMDICVKDGKIVESVSDSAKVIDASGKIVMPGGVDPHSHIAGAKVNVGRMYRPEDSKRDAEKFKGGRAGSGFSVPSTFMTGYRYAQMGYTTAMEAAMPPLLARHTHEEFHDTPIIDHAAYPLFGNNWFVMEYLKEGDVDACAAYASWLLRATKGYTIIVNPAGTEAWGWGGNVHGIYDPAPYFDITPAEIIKGLAEVNEKLQLPHSIHLHCNDLGHPGNYETTLASFDVPKNIKPNPATGSRDTVLYATHVQFHSYGGTTWRDFVSEAPKIADYVNKNDHIVIDVGQITLDETTTMTADGPMEYDLHSLNGLKWANCDVELETGSGVVPFIYSARAPVPAVQWAIGMELFLLIDNPEKVCLTTDSPNAGPFTRYPRVIAWLMSNKYRMNLIEGELHKWAQRKSTVATIDREYTFSEIAQITRATSAKVLGLSDTKGHLGVGADADIAVYDINPETVDPSAEYMAIEEAFSRA
A
C
V
L
K
DGE
I
--
V
V
K
D
G
E
--
V
V
A
S
-
P
--------------------
H
-----
G
--
R
T
-
Y
W
V
D
---------------------------------------
T
Q
V
D
--------
E
S
I
Y
S
-------
E
V
----------
L
A
N
V
E
S
39
Fugue
40.10
19%
6
- C9 -
-
2WKD
-
SSB_BPLP2
A:
[0-88]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GT
I
I
T
V
T
---
A
--
Q
A
N
E
K
N
--
T
R
T
V
-
S
T
A
-
K
-
G
------
D
K
K
---
I
I
S
VPLFE
K
--
E
V
-
K
V
A
Y
-
G
S
-
A
F
M
P
D
--------
F
------
I
Q
M
G
------
D
---
T
V
T
V
S
--------
G
R
V
Q
A
KNYNFVF
P
T
----------
V
E
K
V
F
I
37
Fugue
39.66
17%
-10
- C10 -
-
2JX5
-
?
A:
[1-69]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
L
V
I
V
---
R
--
L
Q
D
Q
T
L
--
P
F
E
L
-
P
A
G
A
R
-
A
------
S
Q
L
---
S
N
L
-----
L
--
S
S
-
S
G
M
A
-
F
S
-
L
H
-
T
Q
--------
G
------
R
V
L
S
------
E
---
A
A
E
L
N
--------
D
K
M
V
I
-------
D
A
----------
F
V
P
A
D
G
45
SP3
37.87
18%
113
- C10 -
-
1BT0
3
A:
[1-73]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M
L
I
K
V
K
-------
T
L
T
G
K
--
E
I
E
I
-
D
I
E
-
P
-
T
------
D
T
I
---
D
R
I
-----
K
--
E
R
-
V
E
E
K
-
E
G
-
I
P
-
P
V
--------
Q
------
Q
R
L
I
Y-----
A
---
G
K
Q
L
A
--------
D
D
-
K
T
-------
A
K
----------
D
Y
N
I
E
G
40
Fugue
36.62
14%
52
- C12 -
-
3HGL
-
A:
[1-78]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAVAHA
N
S
I
V
Q
---
Q
--
L
V
S
E
G
A
--
D
I
S
H
-
T
R
N
M
L
-
R
NAMNG-
D
A
V
---
A
F
S
-----
R
--
V
E
-
Q
N
I
F
-
R
Q
-
H
F
-
P
N
M-------
P
M-----
H
G
I
S
------
R
---
D
S
E
L
A
--------
I
E
L
R
G
-------
A
L
----------
R
R
A
V
H
Q
43
Fugue
35.60
16%
-23
- C10 -
-
1OJ5
-
A:
[6-114]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VESFMTKQDTTGKIISIDTSSLRAAGRTGWEDLV
R
K
C
I
Y
---
A
--
F
F
Q
P
Q
G
--
R
E
P
S
-
Y
A
R
-
Q
-
L
------
F
Q
E
---
V
M
T
-----
R
--
G
T
-
A
S
S
------
P
-
S
Y
--------
R
------
F
I
L
N
------
D
---
G
T
M
L
S
--------
A
H
T
R
C
-------
K
L
----------
C
Y
P
M
Q
P
36
Fugue
35.54
16%
20
- C9 -
-
3JB9
-
RUXE_SCHPO
H:
[9-84]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MIPP
I
N
F
I
F
---
K
--
L
L
Q
Q
H
T
--
P
V
S
I
-
W
L
F
-
E
-
Q
------
T
D
I
---
R
L
Q
-----
G
------
Q
I
R
-
G
F
-
D
E
-
F
M
--------
N
------
I
V
L
D
------
D
---
A
V
Q
V
D
AKNNKREL
G
R
I
L
L
-------
K
G
DN--------
I
T
L
I
Q
A