@TOME V2.3
(Mar 2018)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : JAK2_HUMAN: (2017-06-02 )
CHGPISMDFAISKLKKAGNQTGLYVLRCSPKDFNKYFLTFAVERENVIEYKHCLITKNENEEYNLSGTKKNFSSLKDLLNCY
Atome Classification :
(20 SA)
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.........10........20........30........40-.---...--...--.50........-60----------------..-.....--.----.70........80.---------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CHGPI
S
M
D
F
A
I
S
K
L
K
KAGNQT
G
L
Y
V
L
RCSPKDF
N
K
Y
F
L
T
F
A
-
V
---ER
E
--
N
V
I
--
E
Y
K
H
C
L
I
TKNE-N-----------------EE-YNLSG--T----KK
N
F
S
S
L
K
D
L
L
NCY---------------------------------
1
PsiBlast_PDB
94.29
100%
-162
- C1 -
-
4Z32
-
JAK2_HUMAN
A:
[371-452]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
C
H
G
P
I
S
M
D
F
A
I
S
K
L
K
K
A
G
N
Q
T
G
L
Y
V
L
R
C
S
P
K
D
F
N
K
Y
F
L
T
F
A
-
V
---
E
R
E
--
N
V
I
--
E
Y
K
H
C
L
I
T
K
N
E
-
N
-----------------
E
E
-
Y
N
L
S
G
--
T
----
K
K
N
F
S
S
L
K
D
L
L
N
C
Y
---------------------------------
13
HHSearch
62.90
29%
-139
- C1 -
-
4FL3
-
KSYK_HUMAN
A:
[16-181]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
F
F
G
N
I
T
R
E
E
A
E
D
Y
L
V
Q
G
G
M
S
D
G
L
Y
L
L
R
Q
S
R
N
Y
L
G
G
F
A
L
S
V
A
-
H
---
G
R
--------
K
A
H
H
Y
T
I
E
R
E
L
-
N
-----------------
G
T
-
Y
A
I
A
G
-------
G
R
T
H
A
S
P
A
D
L
C
H
Y
H
---------------------------------
15
HHSearch
62.01
24%
-130
- C1 -
-
3PQZ
2
GRB7_HUMAN
A:
[17-97]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
F
H
G
R
I
S
R
E
E
S
Q
R
L
I
G
Q
Q
G
L
V
D
G
L
F
L
V
R
E
S
Q
R
-
P
Q
G
F
V
L
S
L
C
-
H
---
L
Q
----
K
----
V
K
H
Y
L
I
L
P
S
E
E
E
-----------------
G
R
-
L
Y
F
S
M
DD
G
----
Q
T
R
F
T
D
L
L
Q
L
V
E
F
H
---------------------------------
5
HHSearch
61.45
29%
-166
- C1 -
-
2OZO
-
ZAP70_HUMAN
A:
[11-154]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
F
Y
G
S
I
S
R
A
E
A
E
E
H
L
K
L
A
G
M
A
D
G
L
F
L
L
R
Q
C
L
R
S
L
G
G
Y
V
L
S
L
V
-
H
---
D
V
----
R
----
F
H
H
F
P
I
E
R
Q
L
-
N
-----------------
G
T
-
Y
A
I
A
G
-------
G
K
A
H
C
G
P
A
E
L
C
E
F
Y
---------------------------------
22
HHSearch
60.95
21%
-154
- C1 -
-
1OPK
-
ABL1_MOUSE
A:
[108-182]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Y
H
G
P
V
S
R
N
A
A
E
Y
L
L
S
--
S
G
I
N
G
S
F
L
V
R
E
S
E
S
S
P
G
Q
R
S
I
S
L
R
-
Y
---
E
G
----
R
----
V
Y
H
Y
R
I
N
T
A
S
-
D
-----------------
G
K
-
L
Y
V
S
S
-------
E
S
R
F
N
T
L
A
E
L
V
H
H
H
---------------------------------
8
HHSearch
60.03
29%
-148
- C1 -
-
1RJA
-
PTK6_HUMAN
A:
[5-81]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
F
F
G
C
I
S
R
S
E
A
V
R
R
L
Q
A
E
G
N
A
T
G
A
F
L
I
R
V
S
E
K
P
S
A
D
Y
V
L
S
V
R
-
D
---
T
Q
----
A
----
V
R
H
Y
K
I
W
R
R
A
-
G
-----------------
G
R
-
L
H
L
N
E
-------
A
V
S
F
L
S
L
P
E
L
V
N
Y
H
---------------------------------
14
HHSearch
59.20
21%
-172
- C1 -
-
4EIH
-
A:
[15-89]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Y
H
G
P
V
S
R
S
A
A
E
Y
L
L
S
--
S
L
I
N
G
S
F
L
V
R
E
S
E
S
S
P
G
Q
L
S
I
S
L
R
-
Y
---
E
G
----
R
----
V
Y
H
Y
R
I
N
T
T
A
-
D
-----------------
G
K
-
V
Y
V
T
A
-------
E
S
R
F
S
T
L
A
E
L
V
H
H
H
---------------------------------
24
HHSearch
58.83
21%
-156
* C1 *
-
3WA4
2
GRB2_HUMAN
A:
[7-81]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
F
F
G
K
I
P
R
A
K
A
E
E
M
L
S
K
-
Q
R
H
D
G
A
F
L
I
R
E
S
E
S
A
P
G
D
F
S
L
S
V
K
-
F
---
G
N
----
D
----
V
Q
H
F
K
V
L
R
D
G
-
A
-----------------
G
K
-
Y
F
L
W
--------
V
V
K
F
N
S
L
N
E
L
V
D
Y
H
---------------------------------
18
HHSearch
58.60
24%
-58
- C1 -
-
2H8H
-
SRC_HUMAN
A:
[151-232]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Y
F
G
K
I
T
R
R
E
S
E
R
L
L
L
N
A
E
N
P
R
G
T
F
L
V
R
E
S
E
T
T
K
G
A
Y
C
L
S
V
S
-
D
---
F
D
N
AK
G
L
---
N
V
K
H
Y
K
I
R
K
L
D
-
S
-----------------
G
G
-
F
Y
I
T
S
-------
R
T
Q
F
N
S
L
Q
Q
L
V
A
Y
Y
---------------------------------
21
HHSearch
57.58
19%
-151
- C1 -
-
1I3Z
-
SH21B_MOUSE
A:
[6-86]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Y
H
G
C
L
T
K
R
E
C
E
A
L
L
L
K
-
G
G
V
D
G
N
F
L
I
R
D
S
E
S
V
P
G
A
L
C
L
C
V
S
-
F
---
K
K
----
L
----
V
Y
S
Y
R
I
F
R
E
K
-
H
-----------------
G
Y
-
Y
R
I
E
T
--
D
AHTP
R
T
I
F
P
N
L
Q
E
L
V
S
K
Y
---------------------------------
12
HHSearch
57.58
25%
-33
- C1 -
-
4U1P
1
FYN_HUMAN
A:
[24-105]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Y
F
G
K
L
G
R
K
D
A
E
R
Q
L
L
S
F
G
N
P
R
G
T
F
L
I
R
E
S
E
T
T
K
G
A
Y
S
L
S
I
R
-
D
---
W
D
D
MK
G
D
---
H
V
K
H
Y
K
I
R
K
L
D
-
N
-----------------
G
G
-
Y
Y
I
T
T
-------
R
A
Q
F
E
T
L
Q
Q
L
V
Q
H
Y
---------------------------------
11
HHSearch
56.04
23%
-42
- C1 -
-
4D8K
1
A:
[77-158]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
F
F
K
N
L
S
R
K
D
A
E
R
Q
L
L
A
P
G
N
T
H
G
S
F
L
I
R
E
S
E
S
T
A
G
S
F
S
L
S
V
R
-
D
---
F
D
Q
NQ
G
E
---
V
V
K
H
Y
K
I
R
N
L
D
-
N
-----------------
G
G
-
F
Y
I
S
P
-------
R
I
T
F
P
G
L
H
E
L
V
R
H
Y
---------------------------------
2
PsiBlast_PDB
55.52
34%
-74
- C1 -
-
5L04
-
?
A:
[411-495]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
C
H
G
P
I
C
T
E
Y
A
I
N
K
L
R
Q
E
G
S
E
E
G
M
Y
V
L
R
W
S
C
T
D
F
D
N
I
L
M
T
V
T
C
F
---
E
K
------Q
K
Q
F
K
N
F
Q
I
E
V
Q
K
-
G
------------------
R
-
Y
S
L
H
G
--
S
----
D
R
S
F
P
S
L
G
D
L
M
S
-----------------------------------
3
PsiBlast_PDB
53.26
34%
-157
- C1 -
-
5IXI
-
JAK1_HUMAN
A:
[422-506]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
C
H
G
P
I
C
T
E
Y
A
I
N
K
L
R
Q
E
------
Y
V
L
R
W
S
C
T
D
F
D
N
I
L
M
T
--------------------
N
F
Q
I
-
E
V
Q
-
K
-----------------
G
R
-
Y
S
L
H
G
--
S
----
D
R
S
F
P
S
L
G
D
L
M
S
-----------------------------------
23
HHSearch
53.22
26%
-56
- C1 -
-
1BLJ
-
A:
[15-95]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
F
F
R
T
I
S
R
K
D
A
E
R
Q
L
L
A
P
M
N
K
A
G
S
F
L
I
R
E
S
E
S
N
K
G
A
F
S
L
S
V
K
-
D
ITT
Q
G
---
E
V
----
V
K
H
Y
K
I
R
S
L
D
-
N
-----------------
G
G
-
Y
Y
I
S
P
-------
R
I
T
F
P
T
L
Q
A
L
V
Q
H
Y
---------------------------------
20
HHSearch
52.20
23%
-36
- C1 -
-
1LKK
2
LCK_HUMAN
A:
[7-88]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
F
F
K
N
L
S
R
K
D
A
E
R
Q
L
L
A
P
G
N
T
H
G
S
F
L
I
R
E
S
E
S
T
A
G
S
F
S
L
S
V
R
-
D
---
F
D
Q
NQ
G
E
---
V
V
K
H
Y
K
I
R
N
L
D
-
N
-----------------
G
G
-
F
Y
I
S
P
-------
R
I
T
F
P
G
L
H
E
L
V
R
H
Y
---------------------------------
10
HHSearch
52.01
26%
-93
- C1 -
-
1JU5
1
CRK_HUMAN
A:
[3-93]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Y
W
G
R
L
S
R
Q
E
A
V
A
L
L
Q
--
G
Q
R
H
G
V
F
L
V
R
D
S
S
T
S
P
G
D
Y
V
L
S
V
S
-
E
---
N
S
----
R
----
V
S
H
Y
I
I
N
S
S
G
-
P
R
P
P
V
P
P
S
P
AQPPPGVSP
S
R
-
L
R
I
-
G
-------
D
Q
E
F
D
S
L
P
A
L
L
E
F
Y
---------------------------------
17
HHSearch
51.61
24%
-101
- C1 -
-
2DVJ
-
CRK_HUMAN
A:
[14-104]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Y
W
G
R
L
S
R
Q
E
A
V
A
L
L
Q
--
G
Q
R
H
G
V
F
L
V
R
D
S
S
T
S
P
G
D
Y
V
L
S
V
S
-
E
---
N
S
----
R
----
V
S
H
Y
I
I
N
S
S
G
-
P
RPPVPPSPAQPPPGV
S
P
S
R
-
L
R
I
G
--------
D
Q
E
F
D
S
L
P
A
L
L
E
F
Y
---------------------------------
26
Fugue
51.15
25%
-6
- C1 -
-
4PO6
4
TYK2_HUMAN
A:
[6-546]
G
G
L
K
V
L
L
HWAGPGGGEP
W
V
T
F
SESSLT
A
E
E
V
C
I
H
I
A
H
K
V
GITPPCFNL
F
A
L
F
DAQAQ
V
W
L
P
PN
H
I
L
E
I
PRDASLM
L
Y
F
R
IR
F
Y
F
R
NWHGMNPR
E
P
A
V
Y
R
CGPPGQGMQLLD
P
A
S
F
E
Y
L
F
E
Q
G
K
H
E
F
V
N
DVASLWELST
E
E
E
I
H
H
F
K
N
E
S
L
G
M
A
F
L
H
L
C
H
L
A
L
R
H
GIP
L
E
E
V
A
K
K
T
S
F
K
D
C
I
P
R
S
F
R
R
H
I
R
Q
H
S
A
L
T
R
L
R
L
R
N
V
F
R
R
F
L
R
D
FQPGRLS
Q
Q
M
V
M
V
K
Y
L
A
T
L
E
R
L
A
P
RFG
T
E
R
V
P
V
C
H
L
R
L
L
A
QAEGEPCYIRDAGPPT
H
E
V
L
V
T
GTG
G
I
Q
W
W
P
VE
P
L
W
A
Y
F
CDFRDIT
H
V
V
L
K
EH
C
V
S
I
H
R
QDNKCL
E
L
S
L
PS
R
A
A
A
L
S
F
V
S
L
V
D
G
Y
F
R
L
T
ADSSHYLCHEVAP
P
R
L
V
M
S
I
R
D
G
I
H
G
P
L
L
E
P
F
V
Q
A
K
L
R
P
---
E
D
G
L
Y
L
I
H
W
S
T
S
H
P
Y
R
L
I
L
T
V
A
-
Q
---
R
S
Q
--
A
P
D
--
G
M
Q
S
L
R
L
R
K
F
P
-
I
-----------------
E
Q
A
F
V
L
E
G
--
W
----
G
R
S
F
P
S
V
R
E
L
G
A
A
L
QG
C
L
L
R
A
GD
D
C
F
S
LR
R
C
C
L
PQPGETSNL
I
I
M
R
G
16
HHSearch
49.83
24%
-56
- C1 -
-
2EYZ
-
CRK_HUMAN
A:
[14-104]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Y
W
G
R
L
S
R
Q
E
A
V
A
L
L
Q
--
G
Q
R
H
G
V
F
L
V
R
D
S
S
T
S
P
G
D
Y
V
L
S
V
S
-
E
---
N
S
----
R
----
V
S
H
Y
I
I
N
S
S
G
-
P
RPP
V
P
P
S
P
A
Q
PPPGV
S
P
S
R
-
L
R
I
G
--------
D
Q
E
F
D
S
L
P
A
L
L
E
F
Y
---------------------------------