@TOME V2.3
(Mar 2018)

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3D Common Core:

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Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : I3TYR0: (2017-12-15 )
MNHQAAGGQLVGNIYFERMFIMFHVFYEFQFVEIVKEFFELPYKSDNSLSFDSAFQNCAKPEWNKIKNKKRNFTSVAKQEFDFFRITNSPEYVPANNEIFSEVGYIKLLNKFMKYAITFDDVTIKKFFQYEEFSRDLISELVNFMMTQSKPYKLTNDAQFVLEKIELITDDNGIFKLGQIGWKSQKRLIPLLKKEKETLSPINIASILFELWSTKKIAPCPLDPTKIKEKEKKKEKVEKQEKDNKHSNLYIEVNLDYPEDVPFPNGNYYTLYIKNKRNSLYYGEWDGLKHVAKEKKGIFKKVKGDLYQEIEKIRKNQEISQERNLYIVVNKENISIIHSNIEFWSSFENKVRSVKSKLSTLAHQNKIIGYEASTLEEQTIFNDFLPSWKWQLLSPEIDLDRHLFELETE

Atome Classification :

(20 SA) ----------------------------------.........10........--------20........30.......------.40........50----........60..----.......70........80........90........100.......110..--...----.-.120---.......130----------------..--------------------......--.140.....----.----.150..----.....160....---...170.......180.......190....-.----..200.......210-----.......220....----...230.......240.......250........260---.......270...------....280.....-----..290.......300.--......310.......320.......---330......-----.340...---------------------------....------350.......360.......370.......380.......390........400.......-----------
(Atome) (Ident) (Tito) (Num) (QMean) (Ligand) (Uniprot) ----------------------------------MNHQAAGGQLVGNIYFERM--------FIMFHVFYEFQFVEIVKEF------FELPYKSDNSLSF----DSAFQNCAK-PE----WNKIKNKKRNFTSVAKQEFDFFRITNSPEYVPANNEIFSEVGYIKLLNKFMK--YAI----T-FDDV---TIKKFFQY------------------EE--------------------FSRDLI--SELVNFMMT----Q----SKPYKL----TNDAQFVLEKIE---LITDDNGIFKLGQIGWKSQKRLIPLLKKEK-E----TLSPINIASILFELW-----STKKIAPCPLDPTK----IKEKEKKKEKVEKQEKDNKHSNLY-IEVNLDYPEDVP---FPNGNYYTLYIKN------KRNSLYYGEWDG-----LKHVAKEKKGIFKKVK--GDLYQEIEKIRKNQEISQERNLYIVV---NKENISIIH-----SNIEFWS---------------------------SFEN------KVRSVKSKLSTLAHQNKIIGYEASTLEEQTIFNDFLPSWKW-QLLSPEIDLDRHLFELETE-----------
31 Fugue 67.0517% 24 - C1 - - 5C3M - ? B:[5-438] ----------------------------------LKMATIGG---GSSYTPEL--------VEGLIKRY-----------------HELPVGELWLVDI----PEGKEKLEIVGA----LAKRMVEKAGVPIEIHLTLDRRRALEGADFVTTQFRVGGLEARAKDERIPLK--YGVIGQET-NGPG---GLFKGLRT------------------IP--------------------VILDII--RDMEE-LCP----D----AWLINF----TNPAGMVTEAVL---RYTKQEKVVGLCNVPIGMRMGVAKLLGVDA-DRVHIDFAGLNHMVFGLHVYLDGVEVTEKVIDLVAHPLG----WEPDFLKGLKV------------------------LP---CPYHRYYYQTDKM------LAEELEAAKTKGTRAEVVQQLEKELFELYKDPR--GGAYYSDAACSLISSIYNDKRDIQPV---NTRNNGAIASIPPESAVEVNC---------------------------VITKDGPKPIAVGDLPVAVRGLVQQIKSFERVAAEAAVTGDYQTALVAMTINPLVPSDTIAKQMLDEMLEAHKEHLPQFF--
26 Fugue 46.5315% 66 - C2 - - 5FJ8 - RPC3_YEAST O:[31-654] VMTISSLEQRTLNPDLFLYKELVKAHLGERAASVIGMLVALGRLSVRELVEKIDGMDVDSVKTTLVSLTQLRCVKYLQETAISGKKTTYYYYNEEGIHILLYSGLIIDEIIT-QM----RVNDEEEHKQLVAEIVQNVISLGSLTVEDYLSSVTSDSMKYTISSLFVQLCEMGYLI----Q-ISKLHYTPIEDLWQFLYEKHYKNIPRNSPLSDLKK--------------------RSQAKM--NAKTDFAKI----I----NKPNELSQILTVDPKTSLRIVKPTVSLTINLDRFMKGRRS----KQLINLAKTRVGS----VTAQVYKIALRLTEQ-----KSPKIRDPLTQTGL----LQDLEEAKSFQDEAELVEEKTPGL-TFNAIDLARHLPSASLINSHLKILASSNFPFLNETKPGVYYVPYSK-----LMPVLKSSVYEYVIASTLGPSAMRLSRCIRDNKLVSEKIINSTALMKEKDIRSTLA-----SLIRYNSVEIQEVPRTADRSASRAVFLFRCKETHSYNF------MRQNLEWNMANLLFKKEKLKQENSTLLKKANRDDLLPS-EL-NQLKMVNERELNVFARLSRLLSLWEVFQMA
5 PsiBlast_PDB 40.3829% -91 - C4 - - 2O8F MSH2_HUMAN A:[522-614] -------------------------------------------------------------------------------------------------------------------------------------------YFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTN--SKL----TSLNEE---YTKNKTEY------------------EE--------------------AQDAIV--KEIVNISSG----Y----VEPMQT----LNDVLAQLDAV-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3 PsiBlast_PDB 39.1729%-101 - C4 - - 2O8C MSH2_HUMAN A:[522-614] -------------------------------------------------------------------------------------------------------------------------------------------YFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTN--SKL----TSLNEE---YTKNKTEY------------------EE--------------------AQDAIV--KEIVNISSG----Y----VEPMQT----LNDVLAQLDAV-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2 PsiBlast_PDB 39.1729% -74 - C4 - - 2O8B MSH2_HUMAN A:[522-614] -------------------------------------------------------------------------------------------------------------------------------------------YFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTN--SKL----TSLNEE---YTKNKTEY------------------EE--------------------AQDAIV--KEIVNISSG----Y----VEPMQT----LNDVLAQLDAV-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
23 Fugue 38.5234%-154 * C4 * - 3WY9 - RL12_PYRHO C:[7-32] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------E----KKEEEEKEEEVSEEEALAGLSALF-G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4 PsiBlast_PDB 38.2729% -65 - C4 - - 2O8D MSH2_HUMAN A:[522-614] -------------------------------------------------------------------------------------------------------------------------------------------YFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTN--SKL----TSLNEE---YTKNKTEY------------------EE--------------------AQDAIV--KEIVNISSG----Y----VEPMQT----LNDVLAQLDAV-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
28 Fugue 38.1415% 42 - C2 - - 4DAP - SFSA_ECOLI A:[1-234] ----------------------------------------------------------------MEFSPPLQRATLIQRYKRFL--ADVITPDGRELTLHCPNTGAMTGCAT-PGDTVWYSTSDNTKRKY----PHTWELTQ-SQSGAFICVN---------TLWANRLTK--EAI----L-NE-----SISELSGY------------------SS--------------------LKSEVKYGASRIDFMLQ----A----DS--------RPDCYIEVKSVT---LAENEQGYF-PDAVTERGQKHLRELMSVAA-E----GQRAVIFFAVLHS-------AITRFSPARHIDEKYAQLLSEAQQRGVEILAYKAEISAEGMA-LKKSLPVTL---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1 PsiBlast_PDB 37.8229% -72 - C4 - - 2O8E MSH2_HUMAN A:[522-614] -------------------------------------------------------------------------------------------------------------------------------------------YFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTN--SKL----TSLNEE---YTKNKTEY------------------EE--------------------AQDAIV--KEIVNISSG----Y----VEPMQT----LNDVLAQLDAV-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
20 PsiBlast_PDB 37.7525% 7 - C4 - - 2DEJ GAL1_PYRHO A:[169-282] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LDY-EYIP---FPKDVSILVFYTG------VR----SSEYAE-----RKHIAEESLKILGKGS--S---KEVREGELSKLPPLHRKFFGYI---VRENARVLE-----VRDALK------------------------------EG------NVEEV-GKILTTAHWDLAKNYEVSCKE---------------------------------------------
18 PsiBlast_PDB 37.4325% 16 - C4 - - 2CZ9 - GAL1_PYRHO A:[169-282] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LDY-EYIP---FPKDVSILVFYTG------VR----SSEYAE-----RKHIAEESLKILGKGS--S---KEVREGELSKLPPLHRKFFGYI---VRENARVLE-----VRDALK------------------------------EG------NVEEV-GKILTTAHWDLAKNYEVSCKE---------------------------------------------
34 HHSearch 36.9020%-260 - C4 - - 3J0L - ? T:[51-94] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TQCPIV--ERLIGTLMF----HGRNAGKKALC----IKVVKNAFEIIH---LVTGRN---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8 PsiBlast_PDB 36.2829% -72 - C4 - - 3THY - MSH2_HUMAN A:[522-629] -------------------------------------------------------------------------------------------------------------------------------------------YFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTN--SKL----TSLNEE---YTKNKTEY------------------EE--------------------AQDAIV--KEIVNISSG----Y----VEPMQT----LNDVLAQLDAV-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6 PsiBlast_PDB 35.1329% -62 - C4 - - 3THW - MSH2_HUMAN A:[522-620] -------------------------------------------------------------------------------------------------------------------------------------------YFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTN--SKL----TSLNEE---YTKNKTEY------------------EE--------------------AQDAIV--KEIVNISSG----Y----VEPMQT----LNDVLAQLDAV-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
19 PsiBlast_PDB 34.6725% 2 - C4 - - 2DEI GAL1_PYRHO A:[169-282] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LDY-EYIP---FPKDVSILVFYTG------VRRELASSEYAE-----RKHIAEESLKILGKGS--S---KEVREGELSKLPPLHRKFFGYI---VRENARVLE-----VRDALK------------------------------EG------NVEEV-GKILTTAHWDLAKNYEVSCKE---------------------------------------------
7 PsiBlast_PDB 34.1329% -80 - C4 - - 3THX - MSH2_HUMAN A:[522-631] -------------------------------------------------------------------------------------------------------------------------------------------YFRVTCKEEKVLRNNKNFSTVDIQ--GVKFTN--SKL----TSLNEE---YTKNKTEY------------------EE--------------------AQDAIV--KEIVNISSG----Y----VEPMQT----LNDVLAQLDAV-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
41 HHSearch 33.7426% 0 - C- - - 3J7A - ? I:[7-105] -----------------------------------------------------------------------------------------------------------------------------------------------------------------DIKLFKKWSY--EEI----N-IADL---SLVDCIAV------------------SQKACVYTPHTAGRYQKKRFRKALCPIV--ERLVNSMMMHGRNN----GKKLKA----IRIVAYAFEIIH---LMTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
25 Fugue 33.3516% -43 - C2 - - 3BGY - MCE_MIMIV A:[12-237] ----------------------------------------------------------------ITIFSENEYNEIVEML------RD--YSNGDNLEF----EVSFKNINY-PN----FMRITEHYINITPENKIESNNYLDISLI--FPDKNVYRVSLFNQEQIGEFIT--KFS----K-ASSN---DISRYIVS------------------LD--------------------PSDD----IEIVYKNRG----S----GKLIGI----DN-WAITIKSTE---EIPLVAGKSKISKPKITGSERIMYRYKTRY-S----FTINKNSRIDITDVK-----SSPIIWKLMTVPSN----YELELELINKIDINTLESELLNVF-MIIQD-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9 PsiBlast_PDB 33.1129% -60 - C4 - - 3THZ - MSH2_HUMAN A:[522-620] -------------------------------------------------------------------------------------------------------------------------------------------YFRVTCKEEKVLRNNKNFSTVDIQ--GVKFTN--SKL----TSLNEE---YTKNKTEY------------------EE--------------------AQDAIV--KEIVNISSG----Y----VEPMQT----LNDVLAQLDAV-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
29 Fugue 30.2217% 126 - C4 - - 1QCE - ? A:[1-123] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AQSR-T----LLAGIVQQQQQLLDV-----VKRQQELLRLTVWG----TKNLQTRVTAIEKYLKDQAQLNAWGAAFRQVAHTTVP---WPNAS-----LTP------KWNNETWQEWE-------RKVDFLEENITALLE--EAQIQQEKNMYELQKLNS---------------------------------------------------------------------------------------------------------------------------------------------