@TOME V2.3
(Mar 2018)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : I3U3R0: (2017-12-25 )
MSFSNGAISESTSEMEKASRMSEINFGVSLVFWGKQEIS
Atome Classification :
(19 SA)
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.........--10........20........30........-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(QMean)
(Ligand)
(Uniprot)
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSFSNGAIS--E
S
T
S
E
M
E
K
A
S
R
M
S
EINF
G
V
S
L
V
F
WGKQEIS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1
HHSearch
62.73
53%
22
- C3 -
-
1ZMB
-
?
A:
[260-280]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
D
F
A
L
G
K
I
S
Y
D
E
F
T
S
E
L
M
K
I
N
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
19
Fugue
58.73
28%
70
- C2 -
-
5AWO
-
?
A:
[15-610]
P
V
T
A
A
P
P
LRLASRNS
V
F
T
R
S
G
A
G
P
R
Y
W
N
I
Y
G
Y
S
F
P
H
NAPIP
E
N
E
W
K
V
N
I
D
W
L
A
G
NFADFGYD
I
A
C
T
D
G
WIEGSSRTTGNGYITSYNDSWQHD
W
A
Y
W
A
N
Y
L
A
A
R
K
M
K
L
G
V
Y
Y
N
PLWVH
R
A
A
V
E
DASKTVLGRPDVKIADLVVPGDFFARDIGGNQLYWLDVTKSG
A
K
E
Y
V
Q
G
Y
V
R
Y
F
K
D
L
GVP
Y
L
R
I
D
F
L
S
W
Y
E
DGRDANIGQVNAPHG
R
A
N
Y
E
L
A
L
S
W
I
N
E
A
A
GED
M
E
V
S
L
VPHMFQDG
S
A
E
L
A
NGDLVRINADADKGGWDRLSGMRQNWQDAWPNWAN
P
F
C
G
F
T
G
W
SHRNGRG
Q
L
I
L
D
GDFMRASTFAS
D
E
E
R
K
T
M
M
N
L
M
V
A
A
GSPLAIADTYQQIGNN
A
W
V
Y
T
N
K
E
V
L
Q
L
N
A
D
G
L
V
G
K
P
LYRSATPFSKDPGSRDTE
R
W
A
G
Q
L
PDG
S
W
G
V
A
L
F
N
RSD
T
E
T
V
T
K
T
I
D
FAKDLGLA
T
G
G
N
V
R
DLWEHRNLGMDS
R
A
T
A
ALAPH
A
S
A
I
F
R
V
T
P
P
K
M
HG
T
T
R
Y
P
AAFAAWGGG
A
G
F
N
YNHPGYDGN
G
F
V
D
GLQAGSGS
A
D
P
L
V
T
F
A
V
Q
V
P
H
R
G
S
Y
A
I
R
Y
R
Y
A
N
A
T
G
D
T
S
--
T
M
T
V
T
A
E
K
A
D
R
-
S
T
V
D
G
P
V
H
V
S
F
P
G
L
A
T
W
D
T
W
G
V
A
D
G
T
I
T
L
D
A
G
L
N
L
V
T
I
G
R
G
ATD
K
G
A
I
N
L
N
W
I
E
L
DM----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
15
Fugue
50.29
23%
-36
- C3 -
-
1Z65
-
PRND_MOUSE
A:
[1-30]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
K
N
R
L
G
T
W
W
--
V
A
I
L
C
M
L
L
A
S
H
L
S
T
V
K
---------
A
R
G
I
K
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
20
Fugue
48.24
13%
-357
* C3 *
-
4OGQ
2
PETN_NOSS1
H:
[1-29]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
A
I
L
T
L
G
W
V
S
L
L
V
V
F
T
W
S
I
A
M
V
V
W
G
R
N
G
L
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
17
Fugue
46.79
26%
63
- C3 -
-
1N6J
-
G:
[4-29]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
P
K
G
S
I
S
--
E
E
T
K
Q
K
L
K
S
A
I
L
S
A
Q
S
A
A
N
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
11
Fugue
44.83
13%
-309
- C3 -
-
4H44
2
PETN_NOSS1
H:
[1-29]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
A
I
L
T
L
G
W
V
S
L
L
V
V
F
T
W
S
I
A
M
V
V
W
G
R
N
G
L
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
18
Fugue
43.11
17%
152
- C3 -
-
3WDO
-
?
A:
[3-455]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DYKMT
P
G
E
R
R
A
T
W
G
L
G
T
V
F
S
L
R
M
L
G
M
F
M
V
L
P
V
L
T
T
YGMALQGAS
E
A
L
I
G
I
A
I
G
I
Y
G
L
T
Q
A
V
F
Q
I
P
F
G
L
L
S
D
R
IG
R
K
P
L
I
V
G
G
L
A
V
F
A
A
G
S
V
I
A
A
L
SDS
I
W
G
I
I
L
G
R
A
L
Q
G
S
G
AI
A
A
A
V
M
A
L
L
S
D
L
TREQN
R
T
K
A
M
A
F
I
G
V
S
F
G
I
T
F
A
I
A
M
V
L
G
P
I
I
T
H
K
LG
L
H
A
L
F
W
M
I
A
I
L
A
T
T
G
I
A
L
T
I
W
V
VPNS
S
T
H
V
L
N
R
E
S
G
M
V
K
--
G
S
F
S
K
V
L
A
E
P
R
L
L
K
L
N
F
G
I
M
C
L
H
M
L
L
M
S
T
F
V
A
L
P
G
Q
L
A
D
A
GFP
A
A
E
H
W
K
V
Y
L
A
T
M
L
I
A
F
G
S
V
V
P
F
I
I
Y
A
E
VKRK
M
K
Q
V
F
V
F
C
V
G
L
I
V
V
A
E
I
V
L
W
N
AQTQ
F
W
Q
L
V
V
G
V
Q
L
F
F
V
A
F
N
L
M
E
A
L
L
P
S
L
I
S
K
E
SPAGY
K
G
T
A
M
G
V
Y
S
T
S
Q
F
L
G
V
A
I
G
G
S
L
G
G
W
I
D
G
M
FD
G
Q
G
V
F
L
A
G
A
M
L
A
A
V
W
L
A
V
A
S
T
MKEPP
Y
V
S
S
L
R
I
EIPADIAAN
E
A
L
K
V
R
L
L
E
TEGVK
E
V
L
I
AEEEH
S
A
Y
V
K
I
DSKVTN
R
F
E
V
E
Q
A
I
R
QAL
16
Fugue
42.09
13%
-243
- C3 -
-
2ZT9
3
PETN_NOSS1
H:
[1-29]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
A
I
L
T
L
G
W
V
S
L
L
V
V
F
T
W
S
I
A
M
V
V
W
G
R
N
G
L
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4
HHSearch
35.82
28%
25
- C3 -
-
5V1W
3
?
A:
[509-533]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
F
D
A
G
N
N
Q
--
E
S
S
S
E
--------
A
M
H
A
W
T
N
V
I
L
W
A
E
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7
HHSearch
35.63
56%
33
- C1 -
-
5IT3
-
B:
[76-84]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
H
G
L
I
N
F
G
I
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
14
Fugue
33.05
10%
-118
- C3 -
-
2E74
3
PETN_MASLA
H:
[1-29]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
E
I
D
V
L
G
W
V
A
L
L
V
V
F
T
W
S
I
A
M
V
V
W
G
R
N
G
L
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2
HHSearch
32.82
37%
-118
- C3 -
-
1Q90
3
PETN_CHLRE
N:
[11-29]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
A
T
C
V
M
F
S
F
S
L
S
L
V
V
W
G
R
S
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5
HHSearch
32.73
24%
25
- C3 -
-
5UPI
3
?
A:
[509-533]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
F
D
A
G
N
N
Q
--
Q
S
S
S
E
--------
A
M
H
A
W
T
N
V
I
L
W
A
E
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6
HHSearch
30.75
25%
170
- C3 -
-
2LM7
-
VP7_ROT41
A:
[271-290]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
T
--
A
D
P
T
T
A
P
Q
T
E
R
M
M
R
I
N
W
K
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9
HHSearch
29.08
38%
-120
* C4 *
-
4ZR1
1
SCS7_YEAST
A:
[259-271]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Y
Q
L
G
F
G
V
T
S
W
F
W
D
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8
HHSearch
28.91
33%
191
- C3 -
-
4K35
1
?
A:
[547-570]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
D
G
R
D
Q
--
E
S
V
P
E
--------
S
V
N
F
Y
W
G
A
K
L
W
G
L
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10
HHSearch
23.57
38%
-59
- C4 -
-
4ZR1
-
SCS7_YEAST
B:
[259-271]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Y
Q
L
G
F
G
V
T
S
W
F
W
D
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3
HHSearch
16.03
14%
4
- C3 -
-
2N3T
-
RPN1_YEAST
A:
[566-579]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
A
L
A
L
G
I
L
Y
M
G
Q
G
E
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
13
Fugue
11.91
11%
0
- C- -
-
1VF5
-
PETN_MASLA
H:
[3-29]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
D
V
L
G
W
V
A
L
L
V
V
F
T
W
S
I
A
M
V
V
W
G
R
N
G
L
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------