@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_15_0180: (2018-03-08 )
MADSSKVTLSRASPERLVHHHRVRCAALEGETHAPYEVEAEPTQVDSSHRHYLHYGNAAHIGVHWHSSDAVHGGYSEPSAAGELTAESRETGAVNAAPAPTTSSSTSSPTSASTAARTRLSLSHLSPRTAGEGQPASLTHNPPAVHADPAARPAAPMASTGANGCGHPAVSASAEGRLNHVHATGEAGAPSSASSHSTGLPAPTAAPPKDASTTTAAKNHPLASATTHARTGFSNGRLPSHPEPAASTAAGTTRPPSHPQLPLSHPTTSSAAAAAAATFSSGAVAKEGGTNGAGASTSDGADPYARPAIALSVHLLDLYKMVNARYCAQRRLESPGPKYNSGYDDKDGHYLFLPGEVIFQRYIAQEVLGKGSFGTVIRGFDQKRSEAVAMKITRRGSSFRSQAKLELDILLRLNENPALNHLVVRLLKVFEWQGHLVLVFELLSFNLYQLIKCTRFNGVSLDLVRKFAYQLTHTLLQLELQKPHPIIHCDLKPENILLRNQNRSGIRLIDFGSACYTAKRFHRYIQSRFYRSPEVILFLDYGTPIDRWSLACVLVEMHTGVPLFDGRTEAAQLAKIEATLGPIPAGMVAGSPKANRFYYGNATSGFQLKEPIPERRTLESVIGVTTGGPRGRRLNTPGHDEKAYREFHDFISRFLRYQPEERMSCRDALQHPFLRPLYTSDLQQQKDREVAQPISAPQPPQKQQHTQCSQNSKPQPQSPKNINATTTKMLTSTERSRASALPPAE

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_4(3LLT)
?
[Raw transfer]



ANP_D_4(1J1B)
GSK3B_HUMAN
[Raw transfer]



D15_A_4(2WO6)
DYR1A_HUMAN
[Raw transfer]



3RA_A_7(4AZE)
DYR1A_HUMAN
[Raw transfer]



3RA_A_2(4AZF)
DYRK2_HUMAN
[Raw transfer]



4E3_A_16(4YLL)
DYR1A_HUMAN
[Raw transfer]



GOL_A_3(5BYZ)
MK07_HUMAN
[Raw transfer]



DBQ_A_2(1Z57)
CLK1_HUMAN
[Raw transfer]



4E3_A_16(4YLL)
DYR1A_HUMAN
[Raw transfer]



7AA_A_3(5LXC)
DYRK2_HUMAN
[Raw transfer]



4E2_A_20(4YLK)
DYR1A_HUMAN
[Raw transfer]



7AA_A_3(5LXC)
DYRK2_HUMAN
[Raw transfer]



6FB_A_9(5J1W)
CLK1_HUMAN
[Raw transfer]



B49_C_7(2Y7J)
PHKG2_HUMAN
[Raw transfer]



1PE_A_2(4B4L)
DAPK1_HUMAN
[Raw transfer]



EDO_A_5(5MY8)
?
[Raw transfer]



EDO_A_8(4DN5)
M3K14_HUMAN
[Raw transfer]
24 HHSearch 91.5546% -58 - C1 -4YU2 - DYR1A_HUMAN -
23 HHSearch 89.1346% -51 - C1 -4YLL 6.4 DYR1A_HUMAN
15 PsiBlast_PDB 85.5545% -48 - C1 -4YLJ - DYR1A_HUMAN -
10 PsiBlast_PDB 85.4745% -47 - C1 -2VX3 - DYR1A_HUMAN -
14 PsiBlast_PDB 85.0445% -42 - C1 -4MQ2 - DYR1A_HUMAN -
13 PsiBlast_PDB 84.8145% -48 - C1 -4MQ1 - DYR1A_HUMAN -
2 PsiBlast_PDB 84.4745% -43 - C1 -3ANR - DYR1A_HUMAN -
7 PsiBlast_PDB 84.3845% -44 - C1 -5A4Q - DYR1A_HUMAN -
18 PsiBlast_PDB 84.1945% -49 - C1 -4YU2 - DYR1A_HUMAN -
4 PsiBlast_PDB 84.1445% -42 - C1 -5A3X - DYR1A_HUMAN -
1 PsiBlast_PDB 84.0645% -42 - C1 -3ANQ - DYR1A_HUMAN -
19 PsiBlast_PDB 83.9744% -47 - C1 -4AZE 6.8 DYR1A_HUMAN
12 PsiBlast_PDB 83.7445% -40 - C1 -5AIK - DYR1A_HUMAN -
6 PsiBlast_PDB 83.6345% -44 - C1 -5A4L - DYR1A_HUMAN -
3 PsiBlast_PDB 83.4245% -40 - C1 -4NCT - DYR1A_HUMAN -
16 PsiBlast_PDB 83.1245% -44 - C1 -4YLK 6.6 DYR1A_HUMAN
17 PsiBlast_PDB 83.1045% -44 - C1 -4YLL 6.4 DYR1A_HUMAN
11 PsiBlast_PDB 82.8645% -41 - C1 -2WO6 7.3 DYR1A_HUMAN
5 PsiBlast_PDB 82.3745% -41 - C1 -5A4E - DYR1A_HUMAN -
8 PsiBlast_PDB 82.2645% -43 - C1 -5A4T - DYR1A_HUMAN -
22 HHSearch 75.2242% -47 - C1 -5LXC 7.3 DYRK2_HUMAN
21 HHSearch 71.7142% -42 - C1 -4AZF 6.5 DYRK2_HUMAN
20 PsiBlast_PDB 70.5341% -21 - C1 -5LXC 7.2 DYRK2_HUMAN