@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0919: (2018-01-01 )
MSYQDLKECKIITAFITPFHEDGSINFDAIPALIEHLLDHHTDGILLAGTTAESPTLTHDEELELFAAVQKIVNGRVPLIAGVGTNDTRDSIEFVKEVAEFGGFAAGLAIVPYYNKPSQEGMYQHFKAIADASDLPIIIYNIPGRVVVELTPETMLRLADHPNIIGVKECTSLANMAYLIEHKPEEFLVYTGEDGDAFHAMNLGADGVISVASHTNGDEMHEMFIAIAESDVKKAAAIQRKFIPKVNALFSYPSPAPVKAVLNYMGFEAGPTRLPLVPAPEEDAKRIIKVVVDGDYEATKATVTGVLRPDY

Atome Classification :

(45 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EDO_A_6(3SI9)
DAPA_BARHE
[Raw transfer]




LYS_A_5(3PUO)
DAPA_PSEAE
[Raw transfer]




GOL_B_12(3DAQ)
DAPA_STAAR
[Raw transfer]




GOL_A_10(3DAQ)
DAPA_STAAR
[Raw transfer]




GOL_D_17(3DAQ)
DAPA_STAAR
[Raw transfer]




MES_A_8(3VFL)
?
[Raw transfer]




MES_A_8(3VFL)
?
[Raw transfer]




PYR_A_3(3RK8)
?
[Raw transfer]




PYR_B_11(3RK8)
?
[Raw transfer]




3OH_B_4(3S8H)
DAPA_PSEAE
[Raw transfer]




3OH_B_4(3S8H)
DAPA_PSEAE
[Raw transfer]




GOL_B_8(3TAK)
?
[Raw transfer]




GOL_B_8(3TAK)
?
[Raw transfer]




GOL_A_4(4ICN)
?
[Raw transfer]




GOL_D_10(4I7U)
DAPA_AGRFC
[Raw transfer]




GOL_A_11(3FLU)
DAPA_NEIMB
[Raw transfer]




GOL_B_8(4ICN)
?
[Raw transfer]




GOL_A_11(3FLU)
DAPA_NEIMB
[Raw transfer]




GOL_B_12(3DAQ)
DAPA_STAAR
[Raw transfer]




GOL_A_3(3DI0)
DAPA_STAAC
[Raw transfer]




GOL_D_17(3DAQ)
DAPA_STAAR
[Raw transfer]




OXM_B_6(3UQN)
?
[Raw transfer]




OXM_A_4(3UQN)
?
[Raw transfer]




GOL_B_4(3DI0)
DAPA_STAAC
[Raw transfer]




GOL_B_8(3I7Q)
DAPA_ECOLI
[Raw transfer]




LYS_B_5(3PUE)
?
[Raw transfer]




GOL_A_7(3I7S)
DAPA_ECOLI
[Raw transfer]




3OH_A_3(3S8H)
DAPA_PSEAE
[Raw transfer]




GOL_B_11(3I7S)
DAPA_ECOLI
[Raw transfer]




GOL_B_9(3I7Q)
DAPA_ECOLI
[Raw transfer]




GOL_A_5(3I7R)
DAPA_ECOLI
[Raw transfer]




GOL_A_8(3I7R)
DAPA_ECOLI
[Raw transfer]




GOL_C_16(5F1V)
DAPA_CAMJE
[Raw transfer]




2KT_A_3(3TDF)
?
[Raw transfer]




2KT_B_4(3TDF)
?
[Raw transfer]




6GT_A_4(5J5D)
DAPA_MYCTU
[Raw transfer]




GOL_B_8(3PUD)
?
[Raw transfer]




EDO_A_6(3SI9)
DAPA_BARHE
[Raw transfer]




LYS_B_6(3PUL)
?
[Raw transfer]




DLY_A_7(2ATS)
DAPA_ECOLI
[Raw transfer]




DLY_A_7(2ATS)
DAPA_ECOLI
[Raw transfer]




EDO_B_14(5F1U)
DAPA_CAMJE
[Raw transfer]




LYS_B_9(5T25)
DAPA_ECOLI
[Raw transfer]




PGO_A_3(3PS7)
DAPA_PSEAE
[Raw transfer]




PGO_A_3(3NOE)
DAPA_PSEAE
[Raw transfer]




135 HHSearch 98.7598%-114 - C3 -3VFL 2.4 ?
1 PsiBlast_PDB 98.5397%-114 - C3 -3VFL 2.4 ?
146 HHSearch 73.5042% -90 - C3 -1XKY - ? -
61 PsiBlast_CBE 73.2338%-118 - C3 -5T25 - DAPA_ECOLI -
56 PsiBlast_CBE 72.6939% -96 - C3 -3I7S 2.1 DAPA_ECOLI
62 PsiBlast_CBE 72.6738%-121 - C3 -5T25 3.3 DAPA_ECOLI
94 PsiBlast_CBE 72.6137%-109 - C3 -4PFM - ? -
136 HHSearch 72.4540% -86 - C3 -3FLU - DAPA_NEIMB -
137 HHSearch 71.6240% -86 - C3 -3FLU 2.4 DAPA_NEIMB
63 PsiBlast_CBE 71.6138%-119 - C3 -5T26 - DAPA_ECOLI -
2 PsiBlast_PDB 71.5544% -94 - C3 -1XKY - ? -
93 PsiBlast_CBE 71.4437%-107 - C3 -4PFM - ? -
19 PsiBlast_PDB 71.2639% -95 - C3 -1DHP - DAPA_ECOLI -
155 HHSearch 71.0936% -89 - C3 -5J5D - DAPA_MYCTU -
60 PsiBlast_CBE 71.0339% -98 - C3 -3I7Q 2.1 DAPA_ECOLI
139 HHSearch 70.9937% -79 * C3 *3S8H 3.5 DAPA_PSEAE
143 HHSearch 70.8837% -81 - C3 -3QZE - DAPA_PSEAE -
47 PsiBlast_CBE 70.8439% -96 - C3 -1YXD - DAPA_ECOLI -
91 PsiBlast_CBE 70.8238% -82 - C3 -4ICN 2.8 ?
90 PsiBlast_CBE 70.7438% -87 - C3 -4ICN 3.1 ?
70 PsiBlast_CBE 70.6541% -88 - C3 -3S8H 2.3 DAPA_PSEAE
58 PsiBlast_CBE 70.6239% -95 - C3 -3I7R 2.8 DAPA_ECOLI
59 PsiBlast_CBE 70.5539% -98 - C3 -3I7Q 2.1 DAPA_ECOLI
71 PsiBlast_CBE 70.2241% -91 - C3 -3PUO Error DAPA_PSEAE
57 PsiBlast_CBE 70.2239% -96 - C3 -3I7R 2.0 DAPA_ECOLI
5 PsiBlast_PDB 70.1842% -88 - C3 -3FLU 2.4 DAPA_NEIMB
55 PsiBlast_CBE 69.8539% -95 - C3 -3I7S 2.9 DAPA_ECOLI
69 PsiBlast_CBE 69.4941% -89 - C3 -3S8H 3.5 DAPA_PSEAE
41 PsiBlast_CBE 68.2439% -88 - C3 -3PUL 2.5 ?
151 HHSearch 67.5538% -81 - C3 -3TAK 2.2 ?
11 PsiBlast_PDB 67.2339% -88 - C3 -3RK8 2.4 ?
39 PsiBlast_CBE 67.2039% -87 - C3 -3TAK 2.2 ?
43 PsiBlast_CBE 67.1139% -85 - C3 -3PUD 2.3 ?
42 PsiBlast_CBE 66.0039% -85 - C3 -3PUE 2.1 ?
123 PsiBlast_CBE 63.7837% -62 - C3 -3SI9 2.3 DAPA_BARHE
121 PsiBlast_CBE 63.5037% -63 - C3 -3SI9 Error DAPA_BARHE
104 PsiBlast_CBE 62.7336% -78 - C3 -4I7U 2.4 DAPA_AGRFC
98 PsiBlast_CBE 62.3538% -66 - C3 -3DAQ 2.9 DAPA_STAAR
103 PsiBlast_CBE 61.8237% -73 - C3 -3DI0 3.3 DAPA_STAAC
99 PsiBlast_CBE 61.7038% -69 - C3 -3DAQ Error DAPA_STAAR
102 PsiBlast_CBE 61.2537% -71 - C3 -3DI0 2.8 DAPA_STAAC
96 PsiBlast_CBE 61.0938% -67 - C3 -3DAQ 3.1 DAPA_STAAR
97 PsiBlast_CBE 60.0738% -65 - C3 -3DAQ Error DAPA_STAAR
119 PsiBlast_CBE 59.4833% -36 - C3 -5F1U 3.0 DAPA_CAMJE
115 PsiBlast_CBE 57.3932% -21 - C3 -5F1V 2.1 DAPA_CAMJE