@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VMX3: (2017-11-11 )
MNFQRMTDLNLAGKRVLIREDLNVPVKNGVITSDARLRAALPTIKAALEKGAAVMVFSHLGRPVEGEPKPEQSLAPVAAYLTEALGQEVKLFTDYLDGVEVEAGQVVLLENVRFNPGEKKNNPELAQKYAALCDVFVMDAFGTAHRAEASTEGVARFAPVAAAGPLLAAELDALGRAMQTPEKPMVAIVAGSKVSTKLDVLNSLSGICDQLIVGGGIANTFLAAAGYNVGKSLYEADLVETAKQIAAKVSVPLPTDVVVADASQINFEDFLGSLAAAQAVIKKVEDVTANDMILDVGPETAKAFANILTTSKTILWNGPVGVFEVDQFGEGTKALSLAVAQSDAFSIAGGGDTLAAIDKYNVADQIGYISTGGGAFLEFVEGKTLPAVAVLLERA

Atome Classification :

(65 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_A_4(2X13)
PGK1_HUMAN
[Raw transfer]



ADP_A_4(2WZB)
PGK1_HUMAN
[Raw transfer]



ADP_A_5(2WZC)
PGK1_HUMAN
[Raw transfer]



ADP_A_3(2XE7)
PGK1_HUMAN
[Raw transfer]



ADP_A_5(2WZD)
PGK1_HUMAN
[Raw transfer]



ADP_A_4(4AXX)
PGK1_HUMAN
[Raw transfer]



ADP_A_3(2X15)
PGK1_HUMAN
[Raw transfer]



ADP_A_4(2WZB)
PGK1_HUMAN
[Raw transfer]



ATP_A_3(1VJD)
PGK1_PIG
[Raw transfer]



ANP_A_3(1VPE)
PGKT_THEMA
[Raw transfer]



ACP_A_4(2X14)
PGK1_HUMAN
[Raw transfer]



ANP_A_3(1VPE)
PGKT_THEMA
[Raw transfer]



ANP_A_4(3ZLB)
PGK_STRP2
[Raw transfer]



ANP_A_4(3ZLB)
PGK_STRP2
[Raw transfer]



ADP_A_6(3ZOZ)
PGK1_HUMAN
[Raw transfer]



ADP_C_9(4NG4)
PGK_COXBU
[Raw transfer]



ADP_A_3(1PHP)
PGK_GEOSE
[Raw transfer]



ADP_A_3(1PHP)
PGK_GEOSE
[Raw transfer]



BIS_A_2(16PK)
PGKC_TRYBB
[Raw transfer]



ADP_B_7(4NG4)
PGK_COXBU
[Raw transfer]



ADP_B_7(4NG4)
PGK_COXBU
[Raw transfer]



ATP_A_3(2PAA)
PGK2_MOUSE
[Raw transfer]



BIS_A_2(16PK)
PGKC_TRYBB
[Raw transfer]



ADP_A_5(4NG4)
PGK_COXBU
[Raw transfer]



LA8_A_5(2Y3I)
PGK1_HUMAN
[Raw transfer]



LA8_D_8(2Y3I)
PGK1_HUMAN
[Raw transfer]



ATP_A_3(1VJC)
PGK1_PIG
[Raw transfer]



ATP_A_3(1VJC)
PGK1_PIG
[Raw transfer]



ADP_A_2(4FEY)
PGK_FRATT
[Raw transfer]



ACP_A_4(1KF0)
PGK1_PIG
[Raw transfer]



ADP_A_2(2ZGV)
PGK1_HUMAN
[Raw transfer]



LA8_A_4(2YBE)
PGK1_HUMAN
[Raw transfer]



AMP_A_2(1HDI)
PGK1_PIG
[Raw transfer]



ACP_A_3(2XE8)
PGK1_HUMAN
[Raw transfer]



CDP_A_5(3C3C)
PGK1_HUMAN
[Raw transfer]



ADP_B_6(3C3A)
PGK1_HUMAN
[Raw transfer]



FMT_B_11(3Q3V)
PGK_CAMJE
[Raw transfer]



FMT_A_5(3Q3V)
PGK_CAMJE
[Raw transfer]



FMT_A_5(3Q3V)
PGK_CAMJE
[Raw transfer]



GOL_E_5(1FW8)
PGK_YEAST
[Raw transfer]



CDF_B_5(3C3B)
PGK1_HUMAN
[Raw transfer]



3PG_A_6(2YBE)
PGK1_HUMAN
[Raw transfer]



3PG_B_6(3C3C)
PGK1_HUMAN
[Raw transfer]



3PG_A_3(3C39)
PGK1_HUMAN
[Raw transfer]



3PG_A_5(2CUN)
PGK_PYRHO
[Raw transfer]



3PG_A_5(2CUN)
PGK_PYRHO
[Raw transfer]



3PG_B_4(3C39)
PGK1_HUMAN
[Raw transfer]



3PG_A_2(2XE6)
PGK1_HUMAN
[Raw transfer]



3PG_A_4(3C3A)
PGK1_HUMAN
[Raw transfer]



3PG_B_6(2CUN)
PGK_PYRHO
[Raw transfer]



3PG_A_2(2P9T)
PGK2_MOUSE
[Raw transfer]



3PG_A_3(4O33)
PGK1_HUMAN
[Raw transfer]



3PG_B_4(2PAA)
PGK2_MOUSE
[Raw transfer]



TZN_A_2(4O3F)
PGK1_MOUSE
[Raw transfer]



3PG_A_3(1QPG)
PGK_YEAST
[Raw transfer]



3PG_A_4(3PGK)
PGK_YEAST
[Raw transfer]



3PG_A_3(1QPG)
PGK_YEAST
[Raw transfer]



3PG_A_4(3PGK)
PGK_YEAST
[Raw transfer]
76 HHSearch 88.6066%-123 - C9 -1ZMR - PGK_ECOLI -
2 PsiBlast_PDB 88.1864%-123 - C9 -1ZMR - PGK_ECOLI -
22 PsiBlast_CBE 81.1357% -79 - C9 -4NG4 6.6 PGK_COXBU
84 HHSearch 80.7059% -79 - C9 -4NG4 6.6 PGK_COXBU
71 HHSearch 80.4160% -72 - C9 -4EHJ - PGK_FRATT -
70 HHSearch 80.0760% -72 - C9 -4FEY 3.7 PGK_FRATT
21 PsiBlast_CBE 80.0557% -78 - C9 -4NG4 7.1 PGK_COXBU
4 PsiBlast_PDB 79.5958% -71 - C9 -4FEY - PGK_FRATT -
5 PsiBlast_PDB 79.4557% -71 - C9 -4EHJ - PGK_FRATT -
3 PsiBlast_PDB 79.1657% -71 - C9 -4NG4 - PGK_COXBU -
85 HHSearch 78.6559% -71 - C9 -4NG4 6.9 PGK_COXBU
80 HHSearch 66.0648% 3 - C9 -1VPE 8.5 PGKT_THEMA
78 HHSearch 65.3896% - - C9 -5BT8 - ? -
72 HHSearch 65.1448% -5 - C9 -1PHP 7.8 PGK_GEOSE
74 HHSearch 64.9042% 1 * C9 *3Q3V 3.1 PGK_CAMJE
12 PsiBlast_PDB 64.8340% 1 - C9 -3Q3V 3.1 PGK_CAMJE
7 PsiBlast_PDB 64.6044% -14 - C9 -1PHP 7.8 PGK_GEOSE
73 HHSearch 64.3342% 0 - C9 -3Q3V 3.1 PGK_CAMJE
87 HHSearch 63.9943% -12 - C9 -1QPG 3.3 PGK_YEAST
47 PsiBlast_CBE 63.8938% -27 - C9 -13PK - PGKC_TRYBB -
43 PsiBlast_CBE 63.8138% -29 - C9 -16PK 6.6 PGKC_TRYBB
54 PsiBlast_CBE 63.7438% -6 - C9 -1HDI 5.9 PGK1_PIG
38 PsiBlast_CBE 63.6239% 1 - C9 -1VJD 5.7 PGK1_PIG
35 PsiBlast_CBE 63.5739% -1 - C9 -2XE8 4.9 PGK1_HUMAN
82 HHSearch 63.4741% -26 - C9 -16PK 6.6 PGKC_TRYBB
37 PsiBlast_CBE 63.3739% -1 - C9 -2XE6 5.7 PGK1_HUMAN
40 PsiBlast_CBE 63.2039% 0 - C9 -4O33 5.4 PGK1_HUMAN
36 PsiBlast_CBE 63.1639% -1 - C9 -2XE7 6.3 PGK1_HUMAN
10 PsiBlast_PDB 63.1243% -2 - C9 -3ZLB 7.7 PGK_STRP2
39 PsiBlast_CBE 62.9539% 2 - C9 -1VJC 5.7 PGK1_PIG
48 PsiBlast_CBE 62.7339% -8 - C9 -4O3F 5.9 PGK1_MOUSE
18 PsiBlast_PDB 62.5739% 0 - C9 -3C3C 4.1 PGK1_HUMAN
13 PsiBlast_PDB 62.5139% -2 - C9 -1KF0 5.7 PGK1_PIG
6 PsiBlast_PDB 62.4446% 32 - C9 -1VPE 8.4 PGKT_THEMA
34 PsiBlast_CBE 62.2839% -2 - C9 -2YBE 7.7 PGK1_HUMAN
83 HHSearch 61.9941% -3 - C9 -1VJC 5.8 PGK1_PIG
58 PsiBlast_CBE 61.9434% -18 - C9 -2CUN 2.4 PGK_PYRHO
16 PsiBlast_PDB 61.9239% -4 - C9 -3C3A 3.8 PGK1_HUMAN
89 HHSearch 61.9037% -18 - C9 -2CUN 2.4 PGK_PYRHO
29 PsiBlast_CBE 61.8239% 8 - C9 -2X15 7.7 PGK1_HUMAN
86 HHSearch 61.5542% -4 - C9 -2WZB 8.5 PGK1_HUMAN
19 PsiBlast_PDB 61.5439% 3 - C9 -2Y3I 6.7 PGK1_HUMAN
33 PsiBlast_CBE 61.3039% 3 - C9 -3ZOZ 7.7 PGK1_HUMAN
14 PsiBlast_PDB 61.2639% -2 - C9 -2ZGV 5.0 PGK1_HUMAN
31 PsiBlast_CBE 61.0639% 0 - C9 -2WZC 8.0 PGK1_HUMAN
26 PsiBlast_CBE 61.0639% -9 - C9 -3C3A 5.2 PGK1_HUMAN
28 PsiBlast_CBE 61.0439% 4 - C9 -2Y3I 6.9 PGK1_HUMAN
57 PsiBlast_CBE 60.9734% -18 - C9 -2CUN 2.8 PGK_PYRHO
20 PsiBlast_PDB 60.9639% 1 - C9 -2WZB 8.4 PGK1_HUMAN
15 PsiBlast_PDB 60.8539% 1 - C9 -3C39 5.3 PGK1_HUMAN
42 PsiBlast_CBE 60.7639% 0 - C9 -2X14 8.5 PGK1_HUMAN
32 PsiBlast_CBE 60.7339% 9 - C9 -4AXX 7.8 PGK1_HUMAN
30 PsiBlast_CBE 60.7239% 8 - C9 -2X13 7.0 PGK1_HUMAN
24 PsiBlast_CBE 60.7239% 6 - C9 -3C3C 4.7 PGK1_HUMAN
41 PsiBlast_CBE 60.4639% 1 - C9 -2WZD 7.0 PGK1_HUMAN
75 HHSearch 60.1845% 9 - C9 -3ZLB 7.7 PGK_STRP2
50 PsiBlast_CBE 59.8941% 14 - C9 -1QPG 3.3 PGK_YEAST
25 PsiBlast_CBE 59.8039% 4 - C9 -3C3B 3.7 PGK1_HUMAN
88 HHSearch 59.5143% -7 - C9 -3PGK 2.6 PGK_YEAST
27 PsiBlast_CBE 59.1839% 4 - C9 -3C39 5.5 PGK1_HUMAN
53 PsiBlast_CBE 59.0538% 7 - C9 -2P9T 4.8 PGK2_MOUSE
52 PsiBlast_CBE 58.7738% 7 - C9 -2PAA 5.7 PGK2_MOUSE
49 PsiBlast_CBE 57.9642% -3 - C9 -3PGK 2.6 PGK_YEAST
51 PsiBlast_CBE 57.4838% 2 - C9 -2PAA 3.8 PGK2_MOUSE
59 PsiBlast_CBE 46.8140% 17 - C9 -1FW8 2.7 PGK_YEAST