@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VNC3: (2017-11-13 )
MAELNTPLTVGDFEIKNRLVMAPLTRARSGESRVPNDLMVEYYQQRANAGLILTEATVIGSKTVGYADTPGLWSQEQAQAWNKIIEAVHAQGSKIVVQLWHVGRISHPELLDGDIPVAPSAIQPAGEVSLLRPKRPYVTPRALSIEEIQEIVAQYKHSAELAKAAGFDGVELHAANGYLIDQFLQSNTNQRDDEYGGPVENRARLLLEVVDAFIEVWGAGRVGVHIAPRGDSHDMGDENPLATFGYVVEQLSQRNVAFIFSREYEAADSISPQLRKKFNGVWIANENLTPESAKRILREGQADAVSFGKAYIANPDLLQRLEQGLPLNELQPTTLYAKGAEGYTDYPALEAS

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DNF_A_3(1GVO)
?
[Raw transfer]



CYH_A_3(1GVQ)
?
[Raw transfer]



1L5_A_3(4JIQ)
?
[Raw transfer]



AC6_D_4(2GQ8)
?
[Raw transfer]



FMN_B_10(4AB4)
?
[Raw transfer]



8OZ_A_3(5N6G)
?
[Raw transfer]



TNF_A_3(5K1U)
?
[Raw transfer]



FMN_B_4(3GKA)
?
[Raw transfer]



FMN_B_10(4AB4)
?
[Raw transfer]



FMN_A_3(3GKA)
?
[Raw transfer]



FMN_B_4(3GKA)
?
[Raw transfer]



PCR_A_3(5K1Q)
?
[Raw transfer]



FMN_A_3(4AEO)
?
[Raw transfer]



FMN_A_3(4AB4)
?
[Raw transfer]



HBA_A_4(5K1K)
?
[Raw transfer]



FMN_B_8(4AEO)
?
[Raw transfer]



4KS_A_3(5K1M)
?
[Raw transfer]



GOL_A_8(4E2B)
?
[Raw transfer]



NCA_B_10(4A3U)
?
[Raw transfer]



PHB_B_6(3HGR)
OPR1_SOLLC
[Raw transfer]



PHB_A_4(3HGR)
OPR1_SOLLC
[Raw transfer]



TNF_A_3(5K1W)
?
[Raw transfer]



NCA_B_10(4A3U)
?
[Raw transfer]



4CH_A_4(4AWU)
?
[Raw transfer]



HBA_A_3(5DY3)
DBR2_ARTAN
[Raw transfer]



NCA_A_5(4A3U)
?
[Raw transfer]



4KS_A_8(5K1M)
?
[Raw transfer]



PCR_A_5(5K1Q)
?
[Raw transfer]



PEG_A_5(4E2B)
?
[Raw transfer]
21 PsiBlast_CBE 97.5559% -87 - C5 -3GKA 8.4 ?
1 PsiBlast_PDB 97.2859% -88 - C5 -3GKA 8.7 ?
3 PsiBlast_PDB 96.2560% -84 - C5 -4AEO 8.2 ?
23 PsiBlast_CBE 95.8860% -83 - C5 -4AB4 8.2 ?
2 PsiBlast_PDB 95.7960% -84 - C5 -4AB4 8.0 ?
22 PsiBlast_CBE 95.4060% -82 - C5 -4AEO 7.6 ?
111 HHSearch 87.0158% -29 - C5 -3GKA 8.4 ?
115 HHSearch 86.7659% -29 - C5 -4AB4 8.2 ?
48 PsiBlast_CBE 85.1043% -56 - C5 -4A3U 3.0 ?
47 PsiBlast_CBE 84.5343% -58 - C5 -4A3U 3.2 ?
65 PsiBlast_CBE 80.1840% -69 - C5 -5K1W 4.1 ?
45 PsiBlast_CBE 80.1045% -9 - C5 -1GWJ - ? -
44 PsiBlast_CBE 79.8645% -11 - C5 -2R14 - ? -
46 PsiBlast_CBE 79.5245% -16 - C5 -3GX9 - ? -
35 PsiBlast_CBE 79.4344% -65 - C5 -3WJS - ? -
66 PsiBlast_CBE 79.3840% -65 - C5 -5K1U 3.7 ?
70 PsiBlast_CBE 79.3540% -66 - C5 -5K0R - ? -
69 PsiBlast_CBE 79.3440% -67 - C5 -5K1K 2.9 ?
68 PsiBlast_CBE 79.2840% -68 - C5 -5K1M 4.0 ?
71 PsiBlast_CBE 79.2340% -66 - C5 -4B5N - ? -
67 PsiBlast_CBE 79.1040% -67 - C5 -5K1Q 3.1 ?
114 HHSearch 76.2543% -18 * C5 *4A3U 3.2 ?
49 PsiBlast_CBE 74.3541% -1 - C5 -4AWU 3.1 ?
56 PsiBlast_CBE 71.3838% 15 - C5 -3HGR 3.7 OPR1_SOLLC
55 PsiBlast_CBE 71.0038% 15 - C5 -3HGR 2.7 OPR1_SOLLC