@TOME V2.3
(Mar 2018)

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Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_01_0770: (2018-03-07 )
MSLPSMSLHWSEGDNGGGSLGGSRRSFSKGSIYRHHFLSLDHSSARDVAVGLSRDVTNDRRATGTSAGFEWLQPWRTPQDCREGGVALLYSMQEVLENVRRARKTSLSELYAARGAGSPAASTTSLCHPQHLCPPRAATSGSSDDAEGRCGSVGEKSSCSAAGSRTSSVDRRRQRDRGERNVSVGKGVRSASDDSVQGIELATEVGRVAFSPPLQTATAAAASVPPIVPVIPRFSEVKTEQELIHQRQQQQPQPHPRSEAAKRRRCALANSGDDDDDAARSPHHPDASCPSGGCDQTARPGDSRHRPGMSVEWSGSDSNGDEPEALAQRRHASGVSADDDDVDTSNVHHGKDEERDEEEDRLSETDFGEGGHLACVPGDTLHQRYTLLKALGVGRSSRVWLAVDLEQCSLARCQLIRELGEREVRRLFRTLERPMFVAIKVFRCDPAYADCATYELKLSALIHENVMRRRQQQQQQQQRWPPARASHSASLPSSPIAVPAACDDPGGDLQESSDGGENSTSRPCDEAAVRTRADPTSSTPRSGRISNSGSVSAEVASPASTSATAFSGRLTTVRDAFAVEGAFGTHQCLVMDVLGAGVDRAINEAHLNGFPSAVARSIMQSSLQGLVLLAACHLVHTDIKPENLFFTDLEDDVAEEMLTFQSAQLHASQRQTLCSSFAHRSTAASVMMEREEVAAHEQQQQQHHGDGGTAEHTGVGQRSPFSDPSLPDYTHVDEAAADLHTVHAANAADAGASGDRVASSVTTLSAVAGGHDTLHSSQDSIAQVSRRPNFARTPTRRRSAYDVRLSGLGLSLVVPPCLRLGVRVLANYAADGGGMTADELVRQDPLEQLHWLCAQQQARLLRLPGDDDDDGLGSVAEPWREERWRLAGACAPAESPPPPTLDIGMSEDFIDEAELRALGLQELPKSDADGGRCAAGMAPDEYEEADVTDFVGVPAVDKPAAHHRTTVTTADVGVVGGTLPPATWRTASAATRAGGGRRTPLAAAKRRLFAQCFHEGLATPRDPATVLTRCEGVAAASPTDSSSNSSSGAAPPAGAAAAAAAAATVLRRLECEIVRHQNYRRGAVLQSREYRAPEVLLGDFVLPACDIWSMGCIAYELVSGRFLIDCIVDRERFATALSWQQQQRHGRKGCRAPDDDGGGAHDAKDHSRDDDEDTQQRLNKWDGRPVYLEDTEQDLDVFHLKAIMRLLGPPPVSFLRQQPIGLFIDDFFDEHGNFRFWERGEAQEAGMRLADPYRQLELTHWAAASRVSGASVAVGSGADRQQSPPLPESVSGVAASLDTDPPGAPSAASVGQHVASAQARRDPQDTMNYPIRTPAWQDVQAILREKLGSAEEAADFEVFLRRCLQWDPARRATAAELLADKWLVKYSGVVADASESDVVAEKEGGGDSDGEERRL

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_B_8(1Q99)
SKY1_YEAST
[Raw transfer]



ADE_B_13(1Q8Y)
?
[Raw transfer]
21 HHSearch 65.1433% 0 - C- -5MY8 - ? -
22 HHSearch 63.9924%-130 - C2 -4AZF - DYRK2_HUMAN -
23 HHSearch 63.3925%-136 - C2 -5LXC - DYRK2_HUMAN -
32 HHSearch 61.5930% -60 - C2 -1Q8Y 3.4 ?
26 HHSearch 61.3730% -62 - C2 -1Q99 5.7 SKY1_YEAST
45 Fugue 55.2113% 18 - C2 -4DN5 - M3K14_HUMAN -
41 HHSearch 53.8423% -45 - C2 -4IJP - -
37 HHSearch 53.6823% -47 - C2 -4IIR - PRP4B_HUMAN -
49 Fugue 50.7220% 30 - C2 -5KCV - AKT1_HUMAN -
36 HHSearch 48.4618% -41 - C2 -4B4L - DAPK1_HUMAN -
43 HHSearch 48.2820% -65 - C2 -3C0I - CSKP_HUMAN -
33 HHSearch 47.0516%-115 * C2 *1TKI - TITIN_HUMAN -
40 HHSearch 46.6720% -57 - C2 -3C0G - CSKP_HUMAN -
50 Fugue 43.6312% 35 - C2 -4EUT - TBK1_HUMAN -
48 Fugue 42.9514% 15 - C2 -1TKI - TITIN_HUMAN -
8 PsiBlast_PDB 38.9640%-133 - C2 -5MYV - SRPK2_HUMAN -
47 Fugue 37.2512% 8 - C2 -3UQC - MVINL_MYCTU -
25 HHSearch 36.1413% -58 - C2 -3RP9 - ? -
20 PsiBlast_PDB 35.0448%-146 * C3 *4IJP - PRP4B_HUMAN -
19 PsiBlast_PDB 34.9248%-154 - C3 -4IIR - PRP4B_HUMAN -