@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_03_0200: (2018-03-07 )
MQESNTLIFDVPDAFQVESIIGQGAYGAVCKAVFCDDQIAVKKIPHYSRSEDTARRVLREIEILQNLQFCEQVVGCRLFFRPKSEEKDVYVAMDYIPADLSSVIKNGAITLDESVVRYITCQLLLALRALHRCKVLHRDVSTRNILIHYNSQVFLCDFGLSRFFDPDEQLSFGVVTQWYRAPEIILDAAYSYASDVWSVGVILGELLLRRHLFPGKSNDSANQLQLIFHLVGTPSKDVFDADRSFGRASQNAKNYALAYIERRPCPSTLVNLLSTAPVLHHSAIAAVPPQAVQLAEQLLQFDPAKRPSADEALRHPWFDPCRAFIDEVVQHQDEEEIPVFTQTQNMNVEELVKRIEEVVPVFSEDLLVEDDGGGAAGSA

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_A_3(2F9G)
FUS3_YEAST
[Raw transfer]



4QX_A_7(4ZSG)
MK07_HUMAN
[Raw transfer]



4R0_A_6(4ZSJ)
MK07_HUMAN
[Raw transfer]



GOL_A_4(3HV3)
MK14_HUMAN
[Raw transfer]



GOL_A_3(5BYZ)
MK07_HUMAN
[Raw transfer]
11 PsiBlast_PDB 89.9136% -53 - C1 -2B9H - FUS3_YEAST -
13 PsiBlast_PDB 88.7636% -50 - C1 -2B9J - FUS3_YEAST -
3 PsiBlast_PDB 88.5036% -42 - C1 -4ZSG 6.2 MK07_HUMAN
14 PsiBlast_PDB 87.6136% -47 - C1 -2F49 - FUS3_YEAST -
20 PsiBlast_PDB 87.2533% -46 - C1 -3HV3 2.8 MK14_HUMAN
19 PsiBlast_PDB 87.1933% -50 - C1 -3GCV - MK14_HUMAN -
15 PsiBlast_PDB 86.7136% -49 - C1 -2FA2 - FUS3_YEAST -
5 PsiBlast_PDB 86.6036% -38 - C1 -4IC7 - MK07_HUMAN -
17 PsiBlast_PDB 86.0833% -45 - C1 -3GCQ - MK14_HUMAN -
16 PsiBlast_PDB 85.2133% -39 - C1 -3GCP - MK14_HUMAN -
4 PsiBlast_PDB 84.9036% -40 - C1 -5BYZ 2.4 MK07_HUMAN
10 PsiBlast_PDB 83.1636% -39 - C1 -4ZSJ 6.3 MK07_HUMAN
12 PsiBlast_PDB 83.1236% -34 - C1 -2B9I - FUS3_YEAST -
1 PsiBlast_PDB 83.0736% -41 - C1 -4B99 - MK07_HUMAN -
43 HHSearch 82.9835% -32 * C1 *4ZZN - MK01_HUMAN -
21 HHSearch 82.8638% -28 - C1 -5BYZ - MK07_HUMAN -
9 PsiBlast_PDB 82.4636% -39 - C1 -2B9F - FUS3_YEAST -
8 PsiBlast_PDB 82.3836% -37 - C1 -2F9G 4.3 FUS3_YEAST
18 PsiBlast_PDB 81.2133% -39 - C1 -3GCS - MK14_HUMAN -
2 PsiBlast_PDB 81.1336% -34 - C1 -5BYY - MK07_HUMAN -