@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_09_0450: (2018-03-08 )
MDSSSAAADAGGAAARSGLHVYSSAQANAAGSGTAALPNKALDHMKHMSRSKSDARRSGSKRTFDEATATDNVQLRRHDGTAVPNTAPNQVVEVVAPPPKKKKVTYALPHQNMEEGHFYVVLGEDIDVSTQRFKILSLLGEGTFGKVVESWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNDSGHMCIVMPKYGPCLLDWIMKHGPFNHRHLAQIVFQTGVALDYFHSELHLMHTDLKPENILMETSDTTVDPATNRHLPPDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVILGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAARCGTEEARLLYNSAGQLRPCTDPKHLARIARARTVRDVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKYYPEARQAPSYPDNRAMLRPPPIM

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DBQ_A_2(1Z57)
CLK1_HUMAN
[Raw transfer]



NR9_A_4(3NR9)
CLK2_HUMAN
[Raw transfer]



6FD_A_4(5J1V)
CLK1_HUMAN
[Raw transfer]



6FB_A_9(5J1W)
CLK1_HUMAN
[Raw transfer]



ANP_A_7(1Q99)
SKY1_YEAST
[Raw transfer]



V25_A_2(2VAG)
CLK1_HUMAN
[Raw transfer]



3RA_A_3(3RAW)
CLK3_HUMAN
[Raw transfer]



V25_A_2(2WU7)
CLK3_HUMAN
[Raw transfer]



GOL_A_3(5BYZ)
MK07_HUMAN
[Raw transfer]



DKI_A_2(2WU6)
CLK3_HUMAN
[Raw transfer]



EDO_A_11(2X7G)
SRPK2_HUMAN
[Raw transfer]
1 PsiBlast_PDB 85.0334% -39 - C1 -2WU6 5.5 CLK3_HUMAN
2 PsiBlast_PDB 84.4834% -41 - C1 -2WU7 5.8 CLK3_HUMAN
3 PsiBlast_PDB 84.0834% -35 - C1 -3RAW 5.0 CLK3_HUMAN
4 PsiBlast_PDB 83.8237% -34 - C1 -1Z57 5.1 CLK1_HUMAN
8 PsiBlast_PDB 83.6034% -32 - C1 -2EU9 - CLK3_HUMAN -
6 PsiBlast_PDB 83.1837% -29 - C1 -5J1W 5.4 CLK1_HUMAN
5 PsiBlast_PDB 82.7537% -29 - C1 -5J1V 5.4 CLK1_HUMAN
9 PsiBlast_PDB 82.3036% -28 - C1 -2VAG 6.5 CLK1_HUMAN
10 PsiBlast_PDB 78.8834% -25 - C1 -3NR9 6.4 CLK2_HUMAN
43 HHSearch 76.3035% -27 - C1 -1Z57 - CLK1_HUMAN -
20 PsiBlast_PDB 75.8126% 0 - C- -3BEG - -
13 PsiBlast_PDB 73.0028% -42 - C1 -5MYV - SRPK2_HUMAN -
12 PsiBlast_PDB 72.1328% -43 - C1 -2X7G 2.7 SRPK2_HUMAN
21 HHSearch 71.8629% -39 * C1 *4AZF - DYRK2_HUMAN -
19 PsiBlast_PDB 71.2526% -37 - C1 -5MY8 - ? -
27 HHSearch 70.8629% -29 - C1 -5MY8 - ? -
22 HHSearch 70.3328% -37 - C1 -5LXC - DYRK2_HUMAN -
18 PsiBlast_PDB 69.6926% -45 - C1 -1WAK - SRPK1_HUMAN -
11 PsiBlast_PDB 65.4532% -29 - C1 -3LLT - ? -
23 HHSearch 60.6324% -31 - C1 -5BYZ 2.2 MK07_HUMAN