@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LinJ_11_0250: (2018-03-08 )
MSTSEAEGSISGSGTLRGRACASGGAGKFDKAMKMYQKSMAIRRRLKSMASSTTRSLGDRDDDGFGGGALNEESAAAQTSLSPLRGPMLRSSTQITRVAPASSIASLASPQHSRVLPEMAFGVATASERTAMASQPAIALDAGSSVETRSSMAALMLYSHVPLPALNSFKRLSDPPDVERETAPSSSSPFSLAIPSRGRTKGGSGNRHKKVDASGGENDAVWRKRSPTCSAHLDFPYRFSAERQRTASRHNSGGTSEGFGVGIHKYAGQPSTSTVDSPLLSPMPSFHQMMGRSYDVPALNAIFRGFSNGVDRWQQDSRLLRSPPSPTHATMPAAPPTSVPSVSTSLQLSSSLVSKMSVPPPAAAVTRQIPTVSVSSSAETTAAADVHAMPAGNDAFSYLGPRLSAQAPSRKDRSNSYPADKARPEASGRSTVEGRDGVHASGSLPLVKTMASAPNLKPNEASVLPLGPPPLDESSAATTTTAQFYSTALLAKTFDGAQYLNDYILLNEIGSGSTGRVVLAFSTSMNKSVAIKIILKPKEKYRLQHRVSASPSTSVLGQHSSGGTFSGGRAATALATTTPEAMQNFKSSSSSARRRSKHRQTPSTPFTTAADKTRNLQREVEVMKDLNHPNIVRLYEVINDPKANSLFLVLQYVDNGAVAQLDSTGHIRAPLHPWTVLPIAAQISDGLVYLHEQHIVHRDIKPENILVNRDGHAFLADFGVAELMSAKAGQPTAATLTYQGTPLFMAPEIYAGVDDEDRDEDAEQAPGRCTRRRSSNDADESSNMTASPLCEERRDSRVIDPFALDVWALGVTFYTLLIGHVPFTSMLQISQTVEKGVNIPASLPEQWRTVLRRMMEPRQELRISSAELCHMLHAMLAEQEAAEVRAGGRSRKASLSTRSRSATLGNPRKASHQCCAEGRMARSASLAADAEEESMNLGSSSSSDESGTSGYSKGILGLSITSVGLNILRPTRIRKKQELSCRES

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

6Z5_A_3(5KZ8)
MARK2_HUMAN
[Raw transfer]



ANP_D_4(1J1B)
GSK3B_HUMAN
[Raw transfer]



ATP_A_2(4XBR)
INKA1_HUMAN
[Raw transfer]



8R4_A_2(5UY6)
KKCC2_HUMAN
[Raw transfer]



24R_A_3(5EAK)
MARK2_HUMAN
[Raw transfer]



8R7_A_2(5UYJ)
KKCC2_HUMAN
[Raw transfer]



GOL_A_12(3IGO)
?
[Raw transfer]



609_A_2(2ZV2)
KKCC2_HUMAN
[Raw transfer]



5RC_A_2(5ES1)
MARK4_HUMAN
[Raw transfer]
34 HHSearch 83.8828% 0 - C- -2WTK - STK11_HUMAN -
37 HHSearch 78.8824% -82 - C1 -3CBL - -
43 HHSearch 78.7229%-113 - C1 -5K00 - MELK_HUMAN -
36 HHSearch 76.8924% -81 - C1 -3BKB - -
32 HHSearch 76.3827% -98 - C1 -4XBR 5.1 INKA1_HUMAN (first)
24 HHSearch 75.1929% -42 - C1 -1J1B 4.9 GSK3B_HUMAN
23 HHSearch 73.4524%-101 - C1 -4G3F - -
38 HHSearch 72.3825% -62 - C1 -2Y7J - PHKG2_HUMAN -
25 HHSearch 71.2425% -82 - C1 -4IDV - M3K14_HUMAN -
39 HHSearch 70.7626% -84 - C1 -3C0G - CSKP_HUMAN -
35 HHSearch 69.4726% -80 - C1 -3C0I - CSKP_HUMAN -
26 HHSearch 68.4527% -98 - C1 -2X4F - MYLK4_HUMAN -
42 HHSearch 67.7825% -65 - C1 -2Y7J - PHKG2_HUMAN -
2 PsiBlast_PDB 65.4430% -95 - C1 -5UY6 5.3 KKCC2_HUMAN
1 PsiBlast_PDB 65.4430% -86 - C1 -2ZV2 4.4 KKCC2_HUMAN
3 PsiBlast_PDB 64.6830% -90 - C1 -5UYJ 5.5 KKCC2_HUMAN
12 PsiBlast_PDB 64.6228% -82 - C- -3FE3 - MARK3_HUMAN -
28 HHSearch 63.6921% -94 - C1 -1TKI - TITIN_HUMAN -
49 Fugue 62.4921% -2 - C1 -4DN5 - M3K14_HUMAN -
21 HHSearch 61.0322% -21 * C1 *2PSQ - -