@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : LINJ_13_1380: (2018-07-12 )
MMFNEAAVPFIQTARDNGLLFGGSNVPAMIDYTSEHRKSYHVRGSVFEVAPHFEVLNGIGYGAYGVVCAAVDLRLVASSVYYNEAMRIIEEGGRIVTRQRRGHDAPVYFRTRAVLDEAGRGGPVRVPHLYSEPFKRRVLACGGVSPFVAIKKVTKVFDDLVDGRRILREIKLLRYLQGHPNIVRLMEVGRPHVPTGASSSAAFDDIYLVTDLMDTDLAALLKSSQEIEMDQFRFIAYQLMKVLVYVHSSGVIHRDLKPGNILLNGNCDMKLCDFGLSRGGVPAWPHESTLTAVATAAESSAKELEDWGLFCWSSSAVRGASSAPHAAKQPPLYSLTDYVVTRYYRAPELLIMGRYNHAIDMWSAGCILAEMLLRRPLFTGANYLSQLALILETPGLRGVPQTPEQVAALFEGGEEGKHFINDILFRKTARGRDSLTLSNQVHSQVLFHSTLFGFNVDIPISLGILIAKLLSFDPRKRPTAVEALRDPFFRPLYDSRDEILRCPASDPSVEREEIDDIAAYQKAHPCVVVDESPVFTWEFDHRITSAQALRSLFEEECQISRDVQQQIERQQRPR

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_5(4IC7)
MK07_HUMAN
[Raw transfer]




ADP_A_4(2B9H)
FUS3_YEAST
[Raw transfer]




ADP_A_3(2F9G)
FUS3_YEAST
[Raw transfer]




ADP_A_4(2B9I)
FUS3_YEAST
[Raw transfer]




ADP_A_3(2B9F)
FUS3_YEAST
[Raw transfer]




046_A_2(4O2Z)
?
[Raw transfer]




YIX_A_2(2YIX)
MK14_HUMAN
[Raw transfer]




38Z_A_20(4QTB)
MK03_HUMAN
[Raw transfer]




ADP_A_4(2B9J)
FUS3_YEAST
[Raw transfer]




0RX_A_2(4EYM)
MK13_HUMAN
[Raw transfer]




4WE_A_2(5BYZ)
MK07_HUMAN
[Raw transfer]




5ID_A_7(2ZOQ)
MK03_HUMAN
[Raw transfer]




N58_A_2(5EKN)
MK13_HUMAN
[Raw transfer]




R4L_A_2(4B99)
MK07_HUMAN
[Raw transfer]




CQ8_A_3(4ZZN)
MK01_HUMAN
[Raw transfer]




4WE_A_2(5BYZ)
MK07_HUMAN
[Raw transfer]




GOL_B_6(3N9X)
?
[Raw transfer]




TT4_A_2(4XNE)
MK01_RAT
[Raw transfer]




4WG_A_2(5BYY)
MK07_HUMAN
[Raw transfer]




GOL_B_7(3N9X)
?
[Raw transfer]




EDO_A_5(5VCZ)
PMYT1_HUMAN
[Raw transfer]




EDO_A_4(5VCZ)
PMYT1_HUMAN
[Raw transfer]




DMS_A_7(5VCY)
PMYT1_HUMAN
[Raw transfer]




21 HHSearch 86.4839% -91 * C1 *5BYZ 8.3 MK07_HUMAN
26 HHSearch 85.4639% -91 - C1 -4ZZN 6.2 MK01_HUMAN
33 HHSearch 84.8939% -88 - C1 -4XNE 4.8 MK01_RAT
39 HHSearch 81.3338%-102 - C1 -4O2Z 10.6 ?
42 HHSearch 79.6734%-136 - C1 -4H36 - MK10_HUMAN -
24 HHSearch 76.6640% -26 - C1 -5CI6 - MPK6_ARATH -
25 HHSearch 76.0032% -91 - C1 -3N9X 2.8 ?
27 HHSearch 75.1337% -92 - C- -3COI - MK13_HUMAN -
28 HHSearch 75.0736% -88 - C1 -3OZ6 - ? -
31 HHSearch 74.2236% -86 - C1 -4YNO - MK13_HUMAN -
34 HHSearch 74.2037%-117 - C1 -2YIX 8.3 MK14_HUMAN
29 HHSearch 73.8738%-126 - C1 -2FST - MK14_HUMAN -
12 PsiBlast_PDB 72.0833% -95 - C1 -2ZOQ 4.9 MK03_HUMAN
10 PsiBlast_PDB 71.9533% -94 - C1 -4QTB 7.8 MK03_HUMAN
1 PsiBlast_PDB 68.9533% -82 - C1 -4IC7 3.6 MK07_HUMAN
7 PsiBlast_PDB 67.8833% -75 - C1 -5BYZ 6.0 MK07_HUMAN
3 PsiBlast_PDB 67.8533% -80 - C1 -4ZSG - MK07_HUMAN -
5 PsiBlast_PDB 67.5133% -77 - C1 -4ZSL - MK07_HUMAN -
14 PsiBlast_PDB 67.0633% -99 - C1 -2B9I 4.0 FUS3_YEAST
6 PsiBlast_PDB 66.8333% -73 - C1 -5BYY 5.5 MK07_HUMAN
2 PsiBlast_PDB 66.2933% -94 - C1 -4B99 4.8 MK07_HUMAN
15 PsiBlast_PDB 65.6133% -98 - C1 -2B9J 5.3 FUS3_YEAST
9 PsiBlast_PDB 65.5234% -93 - C1 -2B9F 4.1 FUS3_YEAST
13 PsiBlast_PDB 65.1333% -96 - C1 -2B9H 4.4 FUS3_YEAST
18 PsiBlast_PDB 64.0532% -92 - C1 -4EYM 6.9 MK13_HUMAN
11 PsiBlast_PDB 63.7933% -94 - C1 -2F9G 5.3 FUS3_YEAST
20 PsiBlast_PDB 59.6332% -82 - C1 -5EKN 6.7 MK13_HUMAN