@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0161: (2017-12-16 )
MNTYEGNLVANNIKIGIVVARFNEFITSKLLSGALDNLKRENVNEKDIEVAWVPGAFEIPLIASKMAKSKKYDAIICLGAVIRGNTSHYDYVCSEVSKGIAQISLNSEIPVMFGVLTTDTIEQAIERAGTKAGNKGSECAQGAIEMVNLIRTLDA

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

TS1_E_(1W29)
RISB_MYCTU
[Raw transfer]




T5P_C_(1W19)
RISB_MYCTU
[Raw transfer]




RDL_B_12(1NQU)
RISB_AQUAE
[Raw transfer]




RDL_C_13(1NQU)
RISB_AQUAE
[Raw transfer]




RBF_D_14(1KYV)
RIB4_SCHPO
[Raw transfer]




RBF_B_12(1KYV)
RIB4_SCHPO
[Raw transfer]




JCL_C_21(2C97)
RISB_MYCTU
[Raw transfer]




JCL_A_6(2C97)
RISB_MYCTU
[Raw transfer]




JCL_B_15(2C97)
RISB_MYCTU
[Raw transfer]




MPD_E_(2C97)
RISB_MYCTU
[Raw transfer]




MPD_A_12(2C97)
RISB_MYCTU
[Raw transfer]




274 HHSearch 94.0667% 0 - C- -1RVV - RISB_BACSU -
261 Fugue 93.9466% 0 - C- -1RVV - ? -
2 PsiBlast_PDB 93.9466% 0 - C- -1ZIS - RISB_BACSU -
1 PsiBlast_PDB 93.9466% 0 - C- -1RVV - RISB_BACSU -
137 PsiBlast_CBE 85.2950%-150 - C5 -1NQU 2.1 RISB_AQUAE
271 HHSearch 85.0851%-146 - C5 -1HQK - RISB_AQUAE -
10 PsiBlast_PDB 84.6650%-148 - C5 -1NQX - RISB_AQUAE -
138 PsiBlast_CBE 84.6350%-149 - C5 -1NQU 2.0 RISB_AQUAE
6 PsiBlast_PDB 84.1950%-151 - C5 -1HQK - RISB_AQUAE -
139 PsiBlast_CBE 83.5650%-148 - C5 -1NQU - RISB_AQUAE -
136 PsiBlast_CBE 83.5650%-148 - C5 -1NQU - RISB_AQUAE -
7 PsiBlast_PDB 83.4650%-147 - C5 -1NQU - RISB_AQUAE -
262 Fugue 82.1257% 0 - C- -1RVV - RISB_BACSU -
275 HHSearch 81.9553% -61 - C5 -1C2Y - RISB_SPIOL -
11 PsiBlast_PDB 81.5650% 0 - C- -5MPP - RISB_AQUAE -
9 PsiBlast_PDB 81.5650% 0 - C- -1NQW - RISB_AQUAE -
8 PsiBlast_PDB 81.5650% 0 - C- -1NQV - RISB_AQUAE -
5 PsiBlast_PDB 81.1354% -64 - C5 -1C2Y - RISB_SPIOL -
273 HHSearch 79.4552% 0 - C- -3NQ4 - RISB_SALTY -
4 PsiBlast_PDB 78.5551% 0 - C- -3NQ4 - RISB_SALTY -
168 PsiBlast_CBE 68.1841%-175 - C5 -2C97 3.0 RISB_MYCTU
170 PsiBlast_CBE 67.7941%-176 - C5 -2C97 2.8 RISB_MYCTU
169 PsiBlast_CBE 66.8141%-174 - C5 -2C97 2.0 RISB_MYCTU