@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0525: (2017-12-24 )
MTLLQLQDVTYRYKNTAEAVLYQINYNFEPGKFYSIIGESGAGKSTLLSLLAGLDSPVEGSILFQGEDIRKKGYSYHRMHHISLVFQNYNLIDYLSPLENIQLVNKKASKDTLLELGLDESQIKRNVLQLSGGQQQRVAIARSLVSEAPVILADEPTGNLDPKTAGDIVELLKSLAQKTGKCVIVVTHSKEVAQASDITLELKDKKLTETRNTSK

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_B_6(3FVQ)
FBPC_NEIG1
[Raw transfer]



ATP_B_6(1L2T)
Y796_METJA
[Raw transfer]



ACP_A_4(4AYX)
ABCBA_HUMAN
[Raw transfer]



ANP_J_5(3C41)
?
[Raw transfer]



ATP_J_5(4YMV)
?
[Raw transfer]



ADP_A_3(1F3O)
Y796_METJA
[Raw transfer]



ATP_J_5(4YMU)
?
[Raw transfer]



ADP_A_3(3TIF)
Y796_METJA
[Raw transfer]



ATP_A_6(4YMV)
?
[Raw transfer]



ANP_K_6(3C41)
?
[Raw transfer]



ATP_A_7(4YMU)
?
[Raw transfer]



AGS_B_6(3C4J)
?
[Raw transfer]



AGS_A_4(3C4J)
?
[Raw transfer]



ADP_B_8(3TIF)
Y796_METJA
[Raw transfer]



AT4_D_8(2OLK)
?
[Raw transfer]



ADP_A_2(4U00)
?
[Raw transfer]



AT4_B_6(2OLK)
?
[Raw transfer]



ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]



LMT_B_4(4MKI)
ECFA2_CALS4
[Raw transfer]



LMT_A_7(4MKI)
ECFA2_CALS4
[Raw transfer]
127 HHSearch 76.1233% -47 - C1 -3RLF - MALK_ECOLI -
126 HHSearch 72.5833% -39 * C1 *2AWN - MALK_ECOLI -
22 PsiBlast_CBE 71.9439% 31 - C1 -3TIF 6.2 Y796_METJA
3 PsiBlast_PDB 71.8439% 29 - C1 -3TIF 5.9 Y796_METJA
1 PsiBlast_PDB 71.5240% 29 - C1 -1L2T - Y796_METJA -
2 PsiBlast_PDB 71.3640% 37 - C1 -1F3O 5.9 Y796_METJA
21 PsiBlast_CBE 70.0640% 32 - C1 -1L2T 6.6 Y796_METJA
139 HHSearch 68.1232% -76 - C1 -4MRP - ATM1_NOVAD -
7 PsiBlast_PDB 68.0734% 0 - C- -5NIL - ? -
6 PsiBlast_PDB 68.0734% 0 - C- -5NIK - ? -
138 HHSearch 67.0232% -71 - C1 -4MRS - ATM1_NOVAD -
133 HHSearch 66.5232% -31 - C1 -3FVQ 5.6 FBPC_NEIG1
147 Fugue 65.6831% -19 - C1 -1OXS - ? -
4 PsiBlast_PDB 64.4939% -4 - C1 -2PCJ - LOLD_AQUAE -
120 PsiBlast_CBE 64.1732% -24 - C1 -3FVQ - FBPC_NEIG1 -
121 PsiBlast_CBE 64.0732% -27 - C1 -3FVQ - FBPC_NEIG1 -
128 HHSearch 63.5429% -74 - C1 -3B60 - MSBA_SALTY -
143 HHSearch 63.1130% -43 - C1 -2YYZ - ? -
5 PsiBlast_PDB 62.8939% -3 - C1 -2PCL - LOLD_AQUAE -
47 PsiBlast_CBE 62.3631% -7 - C1 -3TUI - METN_ECOLI -
37 PsiBlast_CBE 57.1436% 31 - C1 -2OLK 5.4 ?
39 PsiBlast_CBE 55.8536% 23 - C1 -2OLK 5.4 ?
9 PsiBlast_PDB 55.7737% -19 - C1 -4U00 4.5 ?
41 PsiBlast_CBE 53.4136% 33 - C1 -3C41 4.8 ?
42 PsiBlast_CBE 51.1636% 35 - C1 -3C41 5.8 ?
28 PsiBlast_CBE 46.2535% 42 - C1 -4YMV 4.4 ?
16 PsiBlast_PDB 46.2135% 47 - C1 -4YMV 4.9 ?
29 PsiBlast_CBE 44.4235% 51 - C1 -4YMU 5.5 ?
15 PsiBlast_PDB 44.1135% 55 - C1 -4YMU 5.6 ?
89 PsiBlast_CBE 37.9034% 5 - C1 -1B0U 3.5 HISP_SALTY