@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0646: (2017-12-26 )
MDTPDENGYVADDYRITYLEAHIKAMRDAIYKDGVDLLGYTTWGCIDSVSAGTGEMNKRYGFIYVDRDNVGNGALKRSKKKSFYWYKDVIDSNGVSIE

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

6GB_A_3(4GPN)
?
[Raw transfer]



BG6_B_7(4F66)
?
[Raw transfer]



BG6_A_3(4F66)
?
[Raw transfer]



P53_A_2(4F79)
?
[Raw transfer]



1FT_B_3(4IPN)
?
[Raw transfer]



6GB_B_5(4GPN)
?
[Raw transfer]



BGP_A_3(4ZEN)
?
[Raw transfer]



GOL_A_3(4IPL)
?
[Raw transfer]



1FT_E_4(4IPN)
?
[Raw transfer]



BGP_B_14(4ZEN)
?
[Raw transfer]
1 PsiBlast_PDB 82.7767% -17 - C8 -4F66 3.2 ?
3 PsiBlast_PDB 82.1867% -38 - C8 -4GPN 2.9 ?
21 PsiBlast_CBE 82.1467% -26 - C8 -4F66 3.0 ?
22 PsiBlast_CBE 81.9167% -49 - C8 -4GPN 2.8 ?
4 PsiBlast_PDB 81.7564% -30 - C8 -3PN8 - ? -
2 PsiBlast_PDB 81.5767% -33 - C8 -4F79 2.9 ?
26 PsiBlast_CBE 81.4454% -64 - C8 -4IPN 2.0 ?
7 PsiBlast_PDB 81.3853% -33 - C8 -4GZE - ? -
9 PsiBlast_PDB 80.4154% -57 - C8 -4IPN 2.4 ?
8 PsiBlast_PDB 80.1554% -61 - C8 -4IPL 2.5 ?
6 PsiBlast_PDB 80.0753% -40 - C8 -3QOM - ? -
28 PsiBlast_CBE 79.1648% -36 - C8 -4ZFM - ? -
12 PsiBlast_PDB 79.0548% -34 - C8 -4ZE4 - ? -
37 PsiBlast_CBE 79.0048% -28 - C8 -4ZEH - ? -
11 PsiBlast_PDB 78.9748% -41 - C8 -4ZFM - ? -
5 PsiBlast_PDB 78.7760% -13 - C8 -2XHY - BGLA_ECOLI -
29 PsiBlast_CBE 78.3848% -32 - C8 -4ZFM - ? -
65 PsiBlast_CBE 77.9740% -87 - C8 -2VRJ - BGLA_THEMA -
14 PsiBlast_PDB 77.9748% -26 - C8 -4ZEN 2.1 ?
10 PsiBlast_PDB 77.6948% -32 - C8 -4ZE5 - ? -