@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr0904: (2017-12-31 )
MNKGGQMKKVMFAGLSLLSLVVLMACGEEETKKTQAAQQPKQQTTVQQISVGKDVPDFTLQSMDGKEVKLSDFKGKKVYLKFWASWCGPCKKSMPELMELAAKPDRDFEILTVIAPGIQGEKTVEQFPQWFQEQGYKDIPVLYDTKATTFQAYQIRSIPTEYLIDSQGKIGKIQFGAISNADAEAAFKEMN

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

C6W_A_5(2YP6)
?
[Raw transfer]




C6W_C_11(2YP6)
?
[Raw transfer]




C6W_B_8(2YP6)
?
[Raw transfer]




C6W_B_8(2YP6)
?
[Raw transfer]




C6W_D_14(2YP6)
?
[Raw transfer]




HED_A_3(4HQZ)
?
[Raw transfer]




HED_B_5(4HQZ)
?
[Raw transfer]




GOL_A_3(4HQS)
?
[Raw transfer]




HED_B_5(4HQZ)
?
[Raw transfer]




22 PsiBlast_CBE 89.3798%-115 - C1 -2YP6 4.0 ?
1 PsiBlast_PDB 89.2998%-114 - C1 -2YP6 3.9 ?
139 HHSearch 88.4499%-118 - C1 -2YP6 4.2 ?
23 PsiBlast_CBE 88.2898%-116 - C1 -2YP6 4.2 ?
21 PsiBlast_CBE 88.0698%-118 - C1 -2YP6 3.9 ?
142 HHSearch 86.5799%-107 - C1 -4HQZ 2.0 ?
24 PsiBlast_CBE 85.3693%-103 - C1 -4HQZ 2.0 ?
2 PsiBlast_PDB 82.8493% -95 - C1 -4HQZ 1.6 ?
3 PsiBlast_PDB 63.0241%-111 - C1 -4HQS 1.8 ?
148 HHSearch 62.1832% -54 - C1 -4NMU - RESA_BACAN -
147 HHSearch 60.8232% -55 - C1 -4NMU - RESA_BACAN -
158 HHSearch 60.1433% -81 - C1 -3KCM - ? -
141 HHSearch 58.4327%-105 - C1 -5UM7 - ? -
157 HHSearch 55.9333% -74 - C1 -3KCM - ? -
9 PsiBlast_PDB 55.5239% -91 - C1 -3KCM - ? -
140 HHSearch 54.9427% -90 - C1 -5UM7 - ? -
150 HHSearch 54.7838% -23 - C1 -4HQS - ? -
151 HHSearch 52.9031% -69 * C1 *3C73 - RESA_BACSU -
153 HHSearch 52.7930% -39 - C1 -2LJA - ? -
131 Fugue 51.5128% 2 - C1 -2FY6 - MSRAB_NEIMA -