@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1156: (2018-01-06 )
MKTKEVVDELTVKRAITRITYEIIERNKDLNKIVLAGIKTRGVFIAHRIQERLKQLENLSVPVVELDTKPFRDDVKSGEDTSLVSVDVTDREVILVDDVLYTGRTIRAAIDNIVGHGRPARVSLAVLVDRGHRELPIRPDYVGKNIPTSRSEEIIVEMTELDDQDRVLITEEA

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

5GP_D_11(4P86)
?
[Raw transfer]



U5P_D_8(4P83)
?
[Raw transfer]



5GP_C_10(4P86)
?
[Raw transfer]



5GP_B_7(4P86)
?
[Raw transfer]



5GP_A_5(4P86)
?
[Raw transfer]



U5P_C_7(4P83)
?
[Raw transfer]



U5P_A_5(4P83)
?
[Raw transfer]



U5P_A_3(2IGB)
PYRR_BACCL
[Raw transfer]



U5P_B_4(2IGB)
PYRR_BACCL
[Raw transfer]



U5P_B_6(4P83)
?
[Raw transfer]



U5P_B_7(1XZ8)
PYRR_BACCL
[Raw transfer]



5GP_A_5(1XZ8)
PYRR_BACCL
[Raw transfer]



GOL_C_8(4P81)
?
[Raw transfer]



3GP_A_6(1XZ8)
PYRR_BACCL
[Raw transfer]
25 PsiBlast_CBE 79.6057% -42 - C5 -2IGB 6.3 PYRR_BACCL
5 PsiBlast_PDB 79.4557% -74 - C5 -1XZ8 4.9 PYRR_BACCL
28 PsiBlast_CBE 78.8157% -55 - C5 -4P83 7.5 ?
27 PsiBlast_CBE 78.7957% -74 - C5 -1XZ8 4.8 PYRR_BACCL
7 PsiBlast_PDB 78.6957% -45 - C5 -2IGB 6.5 PYRR_BACCL
9 PsiBlast_PDB 78.0357% -54 - C5 -4P83 5.3 ?
6 PsiBlast_PDB 77.9857% -73 - C5 -1XZN - PYRR_BACCL -
22 PsiBlast_CBE 77.7857% -50 - C5 -4P81 2.8 ?
4 PsiBlast_PDB 77.7057% -72 - C5 -1NON - PYRR_BACCL -
1 PsiBlast_PDB 77.5257% -45 * C5 *4P81 - ? -
13 PsiBlast_PDB 77.4954% -22 - C5 -4P86 7.1 ?
2 PsiBlast_PDB 76.7956% -42 - C5 -4P80 - ? -
111 HHSearch 76.6752% -38 - C5 -4P82 - PYRR_BACSU -
30 PsiBlast_CBE 75.9657% -55 - C5 -4P83 5.6 ?
34 PsiBlast_CBE 75.9454% -51 - C5 -4P86 6.4 ?
12 PsiBlast_PDB 75.5754% -29 - C5 -4P82 - PYRR_BACSU -
3 PsiBlast_PDB 75.5656% -14 - C5 -4P3K - ? -
29 PsiBlast_CBE 75.4757% -47 - C5 -4P83 5.2 ?
14 PsiBlast_PDB 75.1648%-135 - C5 -1UFR - PYRR_THET8 -
33 PsiBlast_CBE 74.5154% -20 - C5 -4P86 6.7 ?
32 PsiBlast_CBE 72.4554% -21 - C5 -4P86 6.7 ?