@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1188: (2018-01-06 )
MTVINKFVLMEQAKKVLKNAYCPYSKFPVGAAILFKDGKVITGANIENVSFGVTNCAERSAIFYGASQGYRKGDILAIAVAGETEDYLPPCNICRQVMVEFCEPDTLVFLLNGKGNILELRLEELVPYSFSSLEM

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

TYU_D_13(2FR5)
CDD_MOUSE
[Raw transfer]




TYU_B_11(2FR5)
CDD_MOUSE
[Raw transfer]




TYU_D_13(2FR5)
CDD_MOUSE
[Raw transfer]




TYU_C_12(2FR5)
CDD_MOUSE
[Raw transfer]




CTN_A_10(2FR6)
CDD_MOUSE
[Raw transfer]




TYU_A_10(2FR5)
CDD_MOUSE
[Raw transfer]




THU_C_10(1UX1)
CDD_BACSU
[Raw transfer]




CTN_C_12(2FR6)
CDD_MOUSE
[Raw transfer]




CTN_D_13(2FR6)
CDD_MOUSE
[Raw transfer]




BRD_A_5(1MQ0)
CDD_HUMAN
[Raw transfer]




ZEB_A_3(1CTU)
CDD_ECOLI
[Raw transfer]




THU_B_8(1UX1)
CDD_BACSU
[Raw transfer]




BRD_B_6(1MQ0)
CDD_HUMAN
[Raw transfer]




THU_D_12(1UX1)
CDD_BACSU
[Raw transfer]




URI_B_11(2FR6)
CDD_MOUSE
[Raw transfer]




THU_A_5(1UX1)
CDD_BACSU
[Raw transfer]




THU_B_5(1UWZ)
CDD_BACSU
[Raw transfer]




DHZ_A_3(1CTT)
CDD_ECOLI
[Raw transfer]




THU_B_5(1UWZ)
CDD_BACSU
[Raw transfer]




THU_B_6(1JTK)
CDD_BACSU
[Raw transfer]




THU_A_5(1JTK)
CDD_BACSU
[Raw transfer]




THU_B_6(1JTK)
CDD_BACSU
[Raw transfer]




THU_B_5(1UX0)
CDD_BACSU
[Raw transfer]




CTD_A_3(1ALN)
?
[Raw transfer]




EDO_D_12(3R2N)
?
[Raw transfer]




MRD_D_13(3DMO)
?
[Raw transfer]




MRD_B_11(3DMO)
?
[Raw transfer]




MRD_A_10(3DMO)
?
[Raw transfer]




MRD_A_10(3DMO)
?
[Raw transfer]




MRD_C_12(3DMO)
?
[Raw transfer]




EDO_C_10(3R2N)
?
[Raw transfer]




NH3_B_14(2FR6)
CDD_MOUSE
[Raw transfer]




26 PsiBlast_CBE 84.7245%-129 - C5 -1UX1 3.9 CDD_BACSU
5 PsiBlast_PDB 84.3045%-126 - C5 -1UX1 3.8 CDD_BACSU
25 PsiBlast_CBE 84.0545%-124 - C5 -1UX1 3.8 CDD_BACSU
23 PsiBlast_CBE 83.7546%-123 - C5 -1UX0 3.5 CDD_BACSU
24 PsiBlast_CBE 83.3846%-125 - C5 -1UWZ 3.2 CDD_BACSU
1 PsiBlast_PDB 82.9948%-117 - C5 -2D30 - ? -
3 PsiBlast_PDB 82.9346%-125 - C5 -1UX0 - CDD_BACSU -
27 PsiBlast_CBE 82.9145%-123 - C5 -1UX1 3.8 CDD_BACSU
4 PsiBlast_PDB 82.4646%-127 - C5 -1UWZ - CDD_BACSU -
77 HHSearch 81.9945%-134 - C5 -3DMO 3.2 ?
84 HHSearch 81.4246%-133 - C5 -1UWZ 3.2 CDD_BACSU
22 PsiBlast_CBE 81.1646%-125 - C5 -1JTK 3.9 CDD_BACSU
85 HHSearch 80.3747%-133 - C5 -1JTK 3.9 CDD_BACSU
2 PsiBlast_PDB 80.2746%-125 - C5 -1JTK - CDD_BACSU -
33 PsiBlast_CBE 79.6643% -83 - C5 -2FR6 4.0 CDD_MOUSE
89 HHSearch 78.8040% -79 - C5 -1ZAB - CDD_MOUSE -
88 HHSearch 78.5140% -81 * C5 *2FR5 4.0 CDD_MOUSE
36 PsiBlast_CBE 78.3143% -84 - C5 -2FR5 4.1 CDD_MOUSE
34 PsiBlast_CBE 77.9243% -83 - C5 -2FR5 4.0 CDD_MOUSE
31 PsiBlast_CBE 77.7943% -76 - C5 -2FR6 3.5 CDD_MOUSE
35 PsiBlast_CBE 77.7743% -81 - C5 -2FR5 3.9 CDD_MOUSE
8 PsiBlast_PDB 77.3843% -80 - C5 -2FR5 4.1 CDD_MOUSE
32 PsiBlast_CBE 77.3743% -79 - C5 -2FR6 3.7 CDD_MOUSE
9 PsiBlast_PDB 77.2843% -83 - C5 -2FR6 3.7 CDD_MOUSE
67 Fugue 75.6846% -34 - C5 -1JTK 3.9 CDD_BACSU
28 PsiBlast_CBE 73.4648%-143 - C5 -3DMO 3.1 ?
29 PsiBlast_CBE 73.3548%-137 - C5 -3DMO 3.1 ?
30 PsiBlast_CBE 72.6648%-138 - C5 -3DMO 2.9 ?
6 PsiBlast_PDB 72.1248%-142 - C5 -3DMO 3.2 ?
40 PsiBlast_CBE 68.5742% -73 - C5 -1MQ0 3.9 CDD_HUMAN
10 PsiBlast_PDB 66.9842% -73 - C5 -1MQ0 3.6 CDD_HUMAN