@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1228: (2018-01-07 )
MAKVLLGFMGAGKSTIARGLDPNYLDMDALIEKRLGMSIANFFAEKGEAAFRQVESEVLADLLQTDQVVSTGGGVVISQRNRDLLKTNTDNIYLKADFETLYLRIVADKDNQRPLFLNNSKEELVAIFQERQAWYEEVASRVLDVTKLSPEEIIEELR

Atome Classification :

(33 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

S3P_A_2(2IYZ)
AROK_MYCTU
[Raw transfer]




S3P_A_2(2IYY)
AROK_MYCTU
[Raw transfer]




K2Q_A_5(4BQS)
AROK_MYCTU
[Raw transfer]




K2Q_B_7(4BQS)
AROK_MYCTU
[Raw transfer]




SKM_A_2(4Y0A)
?
[Raw transfer]




SKM_A_2(4Y0A)
?
[Raw transfer]




SKM_A_4(2DFN)
AROK_MYCTU
[Raw transfer]




SKM_C_3(1ZUI)
AROK_HELPY
[Raw transfer]




SKM_A_2(2IYX)
AROK_MYCTU
[Raw transfer]




SKM_A_7(2G1K)
AROK_MYCTU
[Raw transfer]




K2Q_C_9(4BQS)
AROK_MYCTU
[Raw transfer]




SKM_A_2(2IYQ)
AROK_MYCTU
[Raw transfer]




SKM_A_6(1U8A)
AROK_MYCTU
[Raw transfer]




SKM_C_3(1ZYU)
AROK_MYCTU
[Raw transfer]




SKM_B_4(2IYR)
AROK_MYCTU
[Raw transfer]




SKM_A_3(2IYR)
AROK_MYCTU
[Raw transfer]




SKM_A_3(3BAF)
AROK_MYCTU
[Raw transfer]




SKM_A_2(2IYS)
AROK_MYCTU
[Raw transfer]




OSA_A_4(3N2E)
AROK_HELPY
[Raw transfer]




DHK_A_6(1WE2)
AROK_MYCTU
[Raw transfer]




OSA_B_7(3N2E)
AROK_HELPY
[Raw transfer]




ADP_A_2(3MUF)
AROK_HELPY
[Raw transfer]




TLA_B_9(3N2E)
AROK_HELPY
[Raw transfer]




PEG_A_6(3VAA)
AROK_BACTN
[Raw transfer]




BME_B_7(3VAA)
AROK_BACTN
[Raw transfer]




BME_A_4(3VAA)
AROK_BACTN
[Raw transfer]




62 HHSearch 88.0136% -34 - C2 -3NWJ - SK2_ARATH -
71 Fugue 86.0037% -12 - C2 -1SHK - AROL_DICCH -
55 HHSearch 86.0035% -23 - C2 -1E6C - AROL_DICCH -
54 HHSearch 82.4235% 9 - C2 -2IYV - AROK_MYCTU -
61 HHSearch 78.9435% 5 - C2 -1VIA - ? -
40 PsiBlast_CBE 78.6435% 18 - C2 -2IYV - AROK_MYCTU -
29 PsiBlast_CBE 78.6335% 38 - C2 -4BQS 4.4 AROK_MYCTU
72 Fugue 78.4936% 29 * C2 *1SHK - AROL_DICCH -
46 PsiBlast_CBE 78.4535% 41 - C2 -2IYQ 3.5 AROK_MYCTU
37 PsiBlast_CBE 78.0935% 36 - C2 -2IYY 3.3 AROK_MYCTU
51 HHSearch 77.9636% 41 - C2 -3TRF - AROK_COXBU -
20 PsiBlast_PDB 77.6935% 43 - C2 -2DFN 5.0 AROK_MYCTU
43 PsiBlast_CBE 77.6635% 18 - C2 -2IYS 3.2 AROK_MYCTU
38 PsiBlast_CBE 77.1735% 41 - C2 -2IYX 3.7 AROK_MYCTU
41 PsiBlast_CBE 76.9335% 28 - C2 -2IYU - AROK_MYCTU -
36 PsiBlast_CBE 76.9235% 30 - C2 -2IYZ 4.2 AROK_MYCTU
10 PsiBlast_PDB 76.6936% 52 - C2 -3TRF - AROK_COXBU -
50 HHSearch 76.5836% 45 - C2 -3TRF - AROK_COXBU -
28 PsiBlast_CBE 76.5635% 37 - C2 -4BQS 4.1 AROK_MYCTU
19 PsiBlast_PDB 76.3235% 35 - C2 -2G1K 3.5 AROK_MYCTU
15 PsiBlast_PDB 76.0735% 36 - C2 -1U8A 3.5 AROK_MYCTU
60 HHSearch 75.2733% 34 - C2 -4Y0A 4.3 ?
16 PsiBlast_PDB 75.2635% 34 - C2 -1WE2 3.1 AROK_MYCTU
30 PsiBlast_CBE 74.9135% 39 - C2 -3BAF 2.6 AROK_MYCTU
44 PsiBlast_CBE 73.5835% 32 - C2 -2IYR 4.0 AROK_MYCTU
27 PsiBlast_CBE 73.5335% 40 - C2 -4BQS 4.3 AROK_MYCTU
17 PsiBlast_PDB 71.4035% 40 - C2 -1ZYU 3.4 AROK_MYCTU
47 PsiBlast_CBE 70.7534% 42 - C2 -4Y0A 4.3 ?
6 PsiBlast_PDB 69.2040% -7 - C2 -3MUF 5.9 AROK_HELPY
25 PsiBlast_CBE 69.0740% -32 - C2 -3N2E 6.6 AROK_HELPY
45 PsiBlast_CBE 69.0335% 28 - C2 -2IYR 2.9 AROK_MYCTU
4 PsiBlast_PDB 67.6540% -21 - C2 -1ZUI 3.8 AROK_HELPY
49 PsiBlast_CBE 53.2432% -1 - C2 -3VAA 2.1 AROK_BACTN