@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VKC0: (2017-10-26 )
MCGVVGIAGKSPVNQMLFDALTMLQHRGQDAAGIVTCHEGRLFLRKDNGMVRDVFHTRHMRALLGNYGIGHVRYPTAGSSSSAEAQPFYVNSPYGITLAHNGNLTNAEEIHDDLFKTDLRHMNTDSDSEVLLNVFAHELQKIGTLNPTPEDIFHTVSRVHERCQGAYGVVAMITGHGLVGFRDPNGIRPLIYGSRVTEQGEMEYIIASESVAITALGFKIERDIAPGEAIFINADGELFTKQCAANPKYRPCIFEYVYFARPDAIIDGISVYKARLKMGEKLAHKILRDWGEDHDIDVVIPIPDTSRTSALELANILGVKLREGFMKNRYIGRTFIMPGQQQRKKSVRQKLNPVELEFKGKNVLLVDDSIVRGTTCNEIIQMARDSGAKKVYFASAAPKVMYPNVYGIDMPAKTELIASERSVEEIQEIIGADRLIFQDLEDLKNAVRTSKVPTLTEFDCSVFDGIYVTGGIDADYLNNLEQKRNDSAKKKKDGYIDVNIDAASVDLTGIKEE

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PCP_B_11(1ECC)
PUR1_ECOLI
[Raw transfer]




PIN_B_6(1ECF)
PUR1_ECOLI
[Raw transfer]




PIN_B_6(1ECF)
PUR1_ECOLI
[Raw transfer]




PIN_B_8(1ECG)
PUR1_ECOLI
[Raw transfer]




PIN_A_4(1ECG)
PUR1_ECOLI
[Raw transfer]




PIN_A_3(1ECF)
PUR1_ECOLI
[Raw transfer]




PIN_A_3(1ECF)
PUR1_ECOLI
[Raw transfer]




22 PsiBlast_CBE 76.3263% -30 - C6 -1ECG 3.6 PUR1_ECOLI
2 PsiBlast_PDB 75.8663% -32 - C6 -1ECG 4.6 PUR1_ECOLI
23 PsiBlast_CBE 75.8263% -30 - C6 -1ECF 4.0 PUR1_ECOLI
26 PsiBlast_CBE 75.8063% -37 - C6 -1ECB - PUR1_ECOLI -
1 PsiBlast_PDB 75.6563% -30 - C6 -1ECF 4.4 PUR1_ECOLI
24 PsiBlast_CBE 75.5363% -28 - C6 -1ECC 7.4 PUR1_ECOLI
4 PsiBlast_PDB 75.1363% -30 - C6 -1ECC - PUR1_ECOLI -
21 PsiBlast_CBE 75.0663% -29 - C6 -1ECJ - PUR1_ECOLI -
99 HHSearch 75.0163% -21 * C6 *1ECF 4.0 PUR1_ECOLI
25 PsiBlast_CBE 74.9063% -37 - C6 -1ECB - PUR1_ECOLI -
5 PsiBlast_PDB 74.7763% -30 - C6 -1ECJ - PUR1_ECOLI -
90 Fugue 74.4662% -26 - C6 -1ECF 4.4 PUR1_ECOLI
27 PsiBlast_CBE 74.1263% -36 - C6 -1ECB - PUR1_ECOLI -
3 PsiBlast_PDB 74.1063% -36 - C6 -1ECB - PUR1_ECOLI -
15 PsiBlast_PDB 40.7238%-198 - C5 -5T3O - ? -
19 PsiBlast_PDB 35.3822%-125 - C5 -3NAG - KPRS_THEVO -
18 PsiBlast_PDB 34.8722%-129 - C5 -3LRT - KPRS_THEVO -
58 PsiBlast_CBE 34.7736%-139 - C5 -4RAD - HPRT_HUMAN -
17 PsiBlast_PDB 33.1422%-128 - C5 -3LPN - KPRS_THEVO -
105 HHSearch 32.0527% -47 - C6 -1JXA - GLMS_ECOLI -