@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VL30: (2017-10-31 )
MQRIAINGFGRIGRNVLRAWFESPKQFHFEIVAINDIADVNTLVHLFKYDSTHGRFNGKVDITIENEKIYLNIQSNQRLLKVEVLQQKQPELLPWASLKIDVVLECTGLFRSHADATRHLEAGAKRVIIGAAPFDHVDAAIVYGVNHADVKATDQIISSVSCTTQALVPLVKIIDDAFGIETALMTEIHAVTADQSVLDHAHRDLRRARASGQNIIPTTSSALGALKRVMPKMENRIDGYSIRVPTINVAAIDLTFIAQSPITVHHINELLIKASQTDYAEIMAVTDEPLVSSDFNHSPYSLIVDSTQTMVVGHQAKVFAWYDNEWGYANRLLDLCDSF

Atome Classification :

(32 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_A_3(3ZCX)
?
[Raw transfer]



NAD_B_6(3ZDF)
?
[Raw transfer]



NAD_A_5(3B1J)
?
[Raw transfer]



NAD_B_7(3B1J)
?
[Raw transfer]



NAD_A_3(4BOY)
?
[Raw transfer]



NAD_B_4(4BOY)
?
[Raw transfer]



NAD_B_4(4BOY)
?
[Raw transfer]



NAD_B_4(3ZCX)
?
[Raw transfer]



NAD_B_4(2EP7)
G3P_AQUAE
[Raw transfer]



NAD_A_5(3ZDF)
?
[Raw transfer]



NAD_B_4(3L0D)
?
[Raw transfer]



NAD_B_4(2EP7)
G3P_AQUAE
[Raw transfer]



NAD_E_5(1VC2)
?
[Raw transfer]



NAD_O_13(1HDG)
G3P_THEMA
[Raw transfer]



NAD_O_13(1HDG)
G3P_THEMA
[Raw transfer]



NAD_A_3(2EP7)
G3P_AQUAE
[Raw transfer]



NAD_Q_15(1HDG)
G3P_THEMA
[Raw transfer]



NAD_A_3(3L0D)
?
[Raw transfer]
118 PsiBlast_CBE 93.5244% 0 - C- -2D2I - ? -
116 PsiBlast_CBE 93.5244% 0 - C- -2D2I - ? -
113 PsiBlast_CBE 93.5244% 0 - C- -2D2I - ? -
135 HHSearch 90.9845%-122 - C4 -2X5J - E4PD_ECOLI -
23 PsiBlast_CBE 89.2048%-109 - C4 -3GNQ - ? -
22 PsiBlast_CBE 89.1948%-110 - C4 -3GNQ - ? -
136 HHSearch 88.6544%-113 - C4 -2X5K - E4PD_ECOLI -
26 PsiBlast_CBE 88.3448%-108 - C4 -3GNQ - ? -
144 HHSearch 88.2846% -84 - C4 -4DIB - ? -
1 PsiBlast_PDB 88.1648%-110 - C4 -3GNQ - ? -
21 PsiBlast_CBE 87.6248%-106 - C4 -3GNQ - ? -
87 PsiBlast_CBE 87.5842%-104 - C4 -4BOY 8.1 ?
27 PsiBlast_CBE 87.5348%-109 - C4 -3GNQ - ? -
20 PsiBlast_PDB 87.4042%-102 - C4 -3ZCX 8.4 ?
2 PsiBlast_PDB 87.1945%-118 - C4 -3L0D 8.3 ?
89 PsiBlast_CBE 87.0742%-104 - C4 -3ZDF 8.7 ?
88 PsiBlast_CBE 87.0642%-105 - C4 -4BOY 8.3 ?
145 HHSearch 86.9746% -82 - C4 -4DIB - ? -
91 PsiBlast_CBE 86.8042%-104 - C4 -3ZCX 8.4 ?
43 PsiBlast_CBE 86.7244%-120 - C4 -2X5K - E4PD_ECOLI -
28 PsiBlast_CBE 86.6445%-118 - C4 -3L0D 9.6 ?
90 PsiBlast_CBE 86.0342%-106 - C4 -3ZDF 8.5 ?
106 PsiBlast_CBE 85.2444% -70 - C4 -3B1J 8.9 ?
105 PsiBlast_CBE 84.3844% -71 - C4 -3B1J 8.2 ?
94 PsiBlast_CBE 83.7843% -68 - C4 -1VC2 8.7 ?
18 PsiBlast_PDB 82.4744% -95 - C4 -1HDG 9.1 G3P_THEMA
82 PsiBlast_CBE 81.4344% -95 - C4 -1HDG 9.4 G3P_THEMA
148 HHSearch 79.8343% -65 - C4 -2EP7 8.8 G3P_AQUAE
146 HHSearch 79.2343% -39 - C4 -4BOY 8.1 ?
93 PsiBlast_CBE 78.8541% -58 - C4 -2EP7 9.0 G3P_AQUAE
92 PsiBlast_CBE 77.9041% -58 - C4 -2EP7 9.0 G3P_AQUAE
149 Fugue 69.5245% 20 - C4 -1HDG 8.7 G3P_THEMA