@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VLE3: (2017-11-02 )
MTAIQPLFTELEPMPKALADAPIGIFDSGIGGMSVAAEIAKYLPNERIVYYADTAYVPYGPRSDEEIRELTARAVDWLYRQGCKIAVVACNTASAFSLDHLREHYGEHFPIVGLVPALKPAVLQTRSKVVAVLATPATFRGQLIKDVVEKFAVPAGVKVMTLTSLELVPCVEAGQQMSPVCLNALREVLQPAVEQGADYLVLGCTHYPFLNEAIHHLFDNQFTLVDSGLAVARQTARILIKNELLCDQIRQNVARIECYVSGNNADALQPVLQNMIPQELTWTLHNLS

Atome Classification :

(38 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DGL_B_7(5IJW)
MURI_MYCS2
[Raw transfer]




DGL_B_7(5IJW)
MURI_MYCS2
[Raw transfer]




DGL_A_3(5HJ7)
MURI_MYCTU
[Raw transfer]




DGL_B_4(5HJ7)
MURI_MYCTU
[Raw transfer]




DGL_A_3(5IJW)
MURI_MYCS2
[Raw transfer]




DGL_A_3(5IJW)
MURI_MYCS2
[Raw transfer]




DGL_B_5(2JFP)
MURI_ENTFA
[Raw transfer]




DGL_A_9(2DWU)
?
[Raw transfer]




DGL_B_8(2DWU)
?
[Raw transfer]




DGL_C_7(2DWU)
?
[Raw transfer]




DGL_A_3(2JFP)
MURI_ENTFA
[Raw transfer]




DGL_H_8(1ZUW)
MURI1_BACSU
[Raw transfer]




DGL_A_4(3OUT)
?
[Raw transfer]




DGL_B_6(2VVT)
MURI_ENTFA
[Raw transfer]




GLU_A_3(2JFO)
MURI_ENTFA
[Raw transfer]




DGL_B_6(2VVT)
MURI_ENTFA
[Raw transfer]




DGL_A_4(2VVT)
MURI_ENTFA
[Raw transfer]




DGL_B_4(2JFQ)
MURI_STAAR
[Raw transfer]




SIN_A_3(3IST)
MURI_LISMO
[Raw transfer]




TLA_A_2(2JFW)
?
[Raw transfer]




DGL_A_3(2JFQ)
MURI_STAAR
[Raw transfer]




DGL_E_5(1ZUW)
MURI1_BACSU
[Raw transfer]




DGL_B_4(2JFO)
MURI_ENTFA
[Raw transfer]




DGL_F_6(1ZUW)
MURI1_BACSU
[Raw transfer]




GLU_A_2(2JFN)
MURI_ECOLI
[Raw transfer]




GLU_A_2(2JFN)
MURI_ECOLI
[Raw transfer]




DGN_C_3(1B74)
MURI_AQUPY
[Raw transfer]




DGN_C_3(1B74)
MURI_AQUPY
[Raw transfer]




NHL_A_2(2OHV)
MURI_STRP1
[Raw transfer]




31 PsiBlast_CBE 88.0438%-106 - C3 -5IJW 4.3 MURI_MYCS2
17 PsiBlast_PDB 87.5638%-104 - C3 -5IJW 4.4 MURI_MYCS2
18 PsiBlast_PDB 85.4737%-104 - C3 -5HJ7 4.6 MURI_MYCTU
37 HHSearch 85.3734% -67 - C3 -5IJW 4.3 MURI_MYCS2
38 HHSearch 85.0234% -64 - C3 -5IJW 4.4 MURI_MYCS2
40 HHSearch 84.7831% -86 * C3 *2GZM - ? -
32 PsiBlast_CBE 84.6137%-104 - C3 -5HJ7 4.2 MURI_MYCTU
7 PsiBlast_PDB 84.4535%-117 - C3 -2JFW 3.3 ?
41 HHSearch 84.1130% -82 - C3 -2JFU - ? -
46 HHSearch 83.8430% -94 - C3 -2OHO - MURI_STRP1 -
58 Fugue 83.5930% -80 - C3 -2JFV - ? -
5 PsiBlast_PDB 83.5635%-118 - C3 -2JFU - ? -
6 PsiBlast_PDB 83.4635%-115 - C3 -2JFV - ? -
12 PsiBlast_PDB 83.3135%-114 - C3 -2OHO - MURI_STRP1 -
44 HHSearch 83.2130% -82 - C3 -2VVT 4.5 MURI_ENTFA
4 PsiBlast_PDB 83.1935% -94 - C3 -2GZM - ? -
22 PsiBlast_CBE 82.9936%-107 - C3 -2JFP 4.3 MURI_ENTFA
9 PsiBlast_PDB 82.4937% -77 - C3 -2JFN 9.3 MURI_ECOLI
25 PsiBlast_CBE 82.3435% -92 - C3 -2GZM - ? -
48 HHSearch 82.1631% -91 - C3 -2OHG - MURI_STRP1 -
2 PsiBlast_PDB 81.8036%-105 - C3 -2JFO 4.7 MURI_ENTFA
21 PsiBlast_CBE 81.3736%-100 - C3 -2VVT 4.5 MURI_ENTFA
3 PsiBlast_PDB 81.2936%-106 - C3 -2JFP 4.4 MURI_ENTFA
23 PsiBlast_CBE 80.8836%-104 - C3 -2JFO 3.8 MURI_ENTFA
1 PsiBlast_PDB 80.6836% -99 - C3 -2VVT 4.5 MURI_ENTFA
19 PsiBlast_PDB 79.4331%-129 - C3 -3OUT 4.3 ?
52 HHSearch 78.8436% -77 - C3 -2JFN 9.3 MURI_ECOLI
30 PsiBlast_CBE 78.5232% -82 - C3 -2JFQ 4.4 MURI_STAAR
36 PsiBlast_CBE 78.4531%-103 - C3 -2DWU 4.6 ?
35 PsiBlast_CBE 78.2231% -99 - C3 -2DWU 4.6 ?
15 PsiBlast_PDB 77.8634% -98 - C3 -3IST 3.9 MURI_LISMO
34 PsiBlast_CBE 77.8031% -99 - C3 -2DWU 4.6 ?
13 PsiBlast_PDB 77.6332% -82 - C3 -2JFQ 4.5 MURI_STAAR
8 PsiBlast_PDB 77.5235% -52 - C3 -1ZUW 4.5 MURI1_BACSU
27 PsiBlast_CBE 76.7635% -57 - C3 -1ZUW 4.6 MURI1_BACSU
28 PsiBlast_CBE 76.5535% -52 - C3 -1ZUW 4.2 MURI1_BACSU
54 HHSearch 75.4130% -84 - C3 -1B74 2.7 MURI_AQUPY
33 PsiBlast_CBE 72.7234% -98 - C3 -1B74 2.7 MURI_AQUPY