@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VLL5: (2017-11-03 )
MNIVQDKNMLPDDQWIDVCALDDLTPNTGAGALVGGQAVAIFRVGHEKRVYVLSNKDPFSQANVMSRGIIGDLQGERVVASPIYKQHFSLATGRCLEDKDQKLAVYPSKIVDGRVWVNAVPQKTYITNTGVSQDKLRLVLIGNGLAGMRCLEDLLDMVPDRYEVTVIGEEPWGNYNRIMLSPVLSGEKTIEDIMLHPPKWYDDKGIKFIAGDKAVKIDRPRKVVYTEKGQTVDYDRLILATGSAPFIPPVQGVDLKGVLTFRDIYDVNTMIEYCGSKNNAVVIGGGLLGLEAAYGLKQRGMNVTVLHLMDRIMERQLDGRASQLLRHSIEQKGIQIITEANTEALIGDENGHVKQIRLKDGTVLDADLVVFAVGIRPNIALAQSAGLRCNRGVLVNDTMQTFDPSIYAVGECIEHRGQTFGLVEPLWGQAFICATHLAEHGSLTFKAPTVPTQLKVSGVDVFSAGNFEPKDDYEDIILNDEKRQIYKRIIIQNDRVIGAVLFGDTEDGMWYAELIADQTPVSSFRNKLLFGRDFALKNAG

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

COA_B_8(3NTD)
?
[Raw transfer]



COA_A_5(3NTA)
?
[Raw transfer]



COA_A_4(4OCG)
?
[Raw transfer]



COA_B_6(4OCG)
?
[Raw transfer]



COA_A_5(3NT6)
?
[Raw transfer]



COA_A_3(3NTD)
?
[Raw transfer]



FMT_A_7(4H4R)
?
[Raw transfer]



FMT_A_8(4H4R)
?
[Raw transfer]
49 HHSearch 89.6626%-132 - C1 -3KLJ - NROR_CLOAB -
1 PsiBlast_PDB 88.0231%-119 - C1 -1XHC - ? -
70 HHSearch 85.1729%-136 - C1 -1XHC - ? -
53 HHSearch 82.5124%-100 - C1 -3EF6 - TODA_PSEP1 -
6 PsiBlast_PDB 82.2526%-118 - C1 -3KLJ - NROR_CLOAB -
52 HHSearch 81.8724% -99 - C1 -4EMJ - TODA_PSEP1 -
68 HHSearch 79.6929% 0 - C- -3IWA - ? -
66 HHSearch 76.3125% -33 - C1 -4FX9 - CDR_PYRHO -
56 HHSearch 75.4528% -22 - C1 -1Q1R - CAMA_PSEPU -
67 HHSearch 73.9025% -33 - C1 -4FX9 - CDR_PYRHO -
57 HHSearch 73.7728% -23 - C1 -1Q1W - CAMA_PSEPU -
39 Fugue 73.2123% -79 - C1 -1D7Y - ? -
63 HHSearch 72.8627% -16 - C1 -3LXD - ? -
65 HHSearch 72.6823% -11 - C1 -3ICS - ? -
64 HHSearch 71.6823% -12 - C1 -3ICT - ? -
59 HHSearch 70.7525% -37 - C1 -2GR3 - ? -
62 HHSearch 70.0523% -12 - C1 -3NTD - ? -
58 HHSearch 69.4824% -43 - C1 -4H4R 3.4 ?
69 HHSearch 69.2723% -23 - C1 -3FG2 - ? -
20 PsiBlast_PDB 64.8430% -39 - C1 -3FG2 - ? -
11 PsiBlast_PDB 41.4432% -14 - C1 -4OCG Error ?
24 PsiBlast_CBE 39.9732% -18 - C1 -3NTD Error ?
25 PsiBlast_CBE 39.2632% -11 - C1 -4OCG Error ?
12 PsiBlast_PDB 39.1332% -13 - C1 -3NT6 Error ?
13 PsiBlast_PDB 37.9432% -14 - C1 -3NTA Error ?
10 PsiBlast_PDB 36.5232% -12 - C1 -3NTD Error ?