@TOME V2.3
(Mar 2018)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VPT5: (2017-11-23 )
MCGIVGGVAERCVTEILIEGLKRLEYRGYDSAGVALLNNQQILRERRVGKVANLADAVSEHQLTGAIGIAHTRWATHGKPTENNAHPHMSGKVAVVHNGIIENYQELKDDLQALGYVFTSQTDTEVVAHLVAEALKNTDSLLEAVESVVPQLKGAYALGIIHSDYPDELITVREGSPLVIGVGIGENFISSDQLALLPVTNRFIYLEEGDIARLTRTSIEVFVKGERVERPVKELDATVSSASKGEYKHYMLKEIYEQPEAIKQTISQALDGNNLRDDFLKDADADFSKLQSVQIIACGTSYHSGMIAKYWFEQLIGVPCQVEIASEFRYRSPVIVENTLYICISQSGETADTLAALRETQKRAKANNIDIQTLTICNVATSSMVRETDHHLLTLAGPEIGVASTKAFTTQLAALMLLILKIGQVKQRISNVMIEELARELWHSPKVILDTLKNDPEILRLSELFVEKQHCLFLGRGTHYPIALEGALKLKEISYIHAEGYAAGELKHGPLALVDNEMPIVILAPNDEMLDKLKSNMEEVQARGGELFVFADENSGVVEKDRQHVVHTPAVNEWLAPIIYSVPVQLLSYHVAVLRGTDVDQPRNLAKSVTVE

Atome Classification :

(29 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GLP_A_2(1MOQ)
GLMS_ECOLI
[Raw transfer]



GLP_A_2(1MOQ)
GLMS_ECOLI
[Raw transfer]



GLP_X_2(2VF5)
GLMS_ECOLI
[Raw transfer]



G6P_A_2(1MOR)
GLMS_ECOLI
[Raw transfer]



AGP_A_6(1MOS)
GLMS_ECOLI
[Raw transfer]



AGP_A_2(2ZJ4)
GFPT1_HUMAN
[Raw transfer]



AGP_A_2(2ZJ4)
GFPT1_HUMAN
[Raw transfer]



G6P_A_2(2ZJ3)
GFPT1_HUMAN
[Raw transfer]



G6P_A_2(2ZJ3)
GFPT1_HUMAN
[Raw transfer]



G6Q_B_4(2J6H)
GLMS_ECOLI
[Raw transfer]



G6Q_A_3(2J6H)
GLMS_ECOLI
[Raw transfer]



BG6_B_4(2PUW)
GFA1_CANAL
[Raw transfer]



BG6_A_3(2PUW)
GFA1_CANAL
[Raw transfer]



GLP_A_2(1MOQ)
?
[Raw transfer]



EDO_A_6(2DEC)
?
[Raw transfer]
25 PsiBlast_CBE 83.3557% -18 - C2 -2J6H 4.4 GLMS_ECOLI
26 PsiBlast_CBE 83.0657% -20 - C2 -3OOJ - GLMS_ECOLI -
27 PsiBlast_CBE 82.9457% -20 - C2 -3OOJ - GLMS_ECOLI -
3 PsiBlast_PDB 82.8457% -16 - C2 -2J6H 3.6 GLMS_ECOLI
1 PsiBlast_PDB 82.6957% -19 - C2 -4AMV - GLMS_ECOLI -
32 PsiBlast_CBE 82.4857% -20 - C2 -3OOJ - GLMS_ECOLI -
6 PsiBlast_PDB 82.4757% -19 - C2 -3OOJ - GLMS_ECOLI -
21 PsiBlast_CBE 82.2957% -19 - C2 -4AMV - GLMS_ECOLI -
29 PsiBlast_CBE 81.6057% -18 - C2 -3OOJ - GLMS_ECOLI -
30 PsiBlast_CBE 81.5857% -18 - C2 -3OOJ - GLMS_ECOLI -
22 PsiBlast_CBE 81.3657% -21 - C2 -4AMV - GLMS_ECOLI -
31 PsiBlast_CBE 80.4157% -17 - C2 -3OOJ - GLMS_ECOLI -
28 PsiBlast_CBE 79.8257% -16 - C2 -3OOJ - GLMS_ECOLI -
2 PsiBlast_PDB 79.2257% -18 - C2 -1JXA - GLMS_ECOLI -
24 PsiBlast_CBE 77.9357% -18 - C2 -1JXA - GLMS_ECOLI -
23 PsiBlast_CBE 76.9157% -22 - C2 -1JXA - GLMS_ECOLI -
58 HHSearch 75.6659% -4 - C2 -1JXA - GLMS_ECOLI -
8 PsiBlast_PDB 61.3556% -40 - C2 -1MOQ 4.4 GLMS_ECOLI
7 PsiBlast_PDB 61.1256% -38 - C2 -1MOS 4.5 GLMS_ECOLI
9 PsiBlast_PDB 60.7956% -37 - C2 -1MOR 4.2 GLMS_ECOLI
5 PsiBlast_PDB 60.1057% -39 - C2 -2VF5 3.2 GLMS_ECOLI
67 HHSearch 58.4258% -15 - C2 -1MOQ 4.4 GLMS_ECOLI
62 HHSearch 51.8840% -14 * C2 *2ZJ3 3.5 GFPT1_HUMAN
14 PsiBlast_PDB 51.3340% -10 - C2 -2ZJ3 3.5 GFPT1_HUMAN
38 PsiBlast_CBE 50.8742% -27 - C2 -2PUW 3.0 GFA1_CANAL
63 HHSearch 50.7940% -10 - C2 -2ZJ4 4.4 GFPT1_HUMAN
15 PsiBlast_PDB 50.4940% -9 - C2 -2ZJ4 4.4 GFPT1_HUMAN
20 PsiBlast_PDB 50.0842% -19 - C2 -2PUW 2.8 GFA1_CANAL
53 Fugue 31.3360% -15 - C2 -1MOQ Error ?