@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VQ20: (2017-11-24 )
MDKTIGIFGGGQLGRMMAQAALPLNIQCTFFEANTDCPAGVLGQVFSSQDEQGLKQFIESADVFSLEFENTPVADVDVLTQTKTLHPPRIALATAQNRLSEKALFDELAIPVAPYRAVDSLESLKKAVAELGLPIVLKTATGGYDGKGQFVLRSEDQIDTAWAELGPAKSLVAESFVKFSCEVSIIAVRGQNGEVKTWPLAENHHHNGILSHSIVPAPNSEALQPVAQDYITRLLNHLNYVGVLTLELFVTEQGLCANEMAPRVHNSGHWSIEGAVCSQFENHIRAVAGLPLGSTDVVRPTVMINIIGQHPKTKDVLALNGAHLHLYNKSERAGRKLGHITLMPVDSNELTNLCRQLAKILPEPLALTDDMTI

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_B_6(3V4S)
?
[Raw transfer]



ANP_A_2(4MA5)
?
[Raw transfer]



ATP_B_12(4DLK)
?
[Raw transfer]



ATP_A_6(4DLK)
?
[Raw transfer]



A12_A_3(4MAM)
?
[Raw transfer]



ADP_A_3(3V4S)
?
[Raw transfer]



A12_A_3(4MAM)
?
[Raw transfer]



ATP_B_12(4DLK)
?
[Raw transfer]



ADP_A_3(3R5H)
?
[Raw transfer]



ADP_A_3(3QFF)
?
[Raw transfer]



ADP_A_4(3ORQ)
?
[Raw transfer]



ADP_A_4(3ORQ)
?
[Raw transfer]



ADP_A_2(5JQW)
?
[Raw transfer]



ADP_B_4(3QFF)
?
[Raw transfer]



ADP_B_6(3R5H)
?
[Raw transfer]



AMP_A_2(4MA0)
?
[Raw transfer]



AMP_A_3(3AW8)
?
[Raw transfer]



AMP_A_3(3AW8)
?
[Raw transfer]



AMP_B_5(3AW8)
?
[Raw transfer]



ATP_A_7(4DLK)
?
[Raw transfer]



ATP_A_8(4DLK)
?
[Raw transfer]
70 HHSearch 90.9848% -5 - C1 -3AW8 4.4 ?
71 HHSearch 90.3441% 11 - C1 -4MAM 7.0 ?
6 PsiBlast_PDB 89.9041% -4 - C1 -4M9U - ? -
4 PsiBlast_PDB 89.2141% -4 - C1 -4MA0 5.4 ?
9 PsiBlast_PDB 89.1543% -12 - C1 -3QFF 6.6 ?
7 PsiBlast_PDB 89.0243% -10 - C1 -4DLK 7.2 ?
26 PsiBlast_CBE 88.7943% -9 - C1 -3V4S 7.4 ?
10 PsiBlast_PDB 88.7843% -13 - C1 -3R5H 6.3 ?
5 PsiBlast_PDB 88.4541% -4 - C1 -4MAM 7.2 ?
22 PsiBlast_CBE 88.3743% -8 - C1 -4DLK 6.6 ?
11 PsiBlast_PDB 87.9843% -10 - C1 -3V4S 7.0 ?
74 HHSearch 87.6138% -6 - C1 -4E4T - ? -
3 PsiBlast_PDB 87.3841% -7 - C1 -4MA5 5.2 ?
24 PsiBlast_CBE 87.1943% -9 - C1 -3QFF 5.1 ?
8 PsiBlast_PDB 87.1443% -13 - C1 -3Q2O - ? -
23 PsiBlast_CBE 86.8943% -13 - C1 -3R5H 5.9 ?
1 PsiBlast_PDB 86.6446% 2 - C1 -3AW8 4.4 ?
2 PsiBlast_PDB 86.5441% -7 - C1 -5JQW 5.6 ?
69 HHSearch 86.4740% 7 - C1 -3Q2O - ? -
73 HHSearch 86.1440% 7 * C1 *4DLK 4.5 ?
21 PsiBlast_CBE 85.3746% -2 - C1 -3AW8 5.4 ?
72 HHSearch 79.1334% 20 - C1 -3ORQ 5.2 ?
17 PsiBlast_PDB 69.7333% 22 - C1 -3ORQ 5.2 ?