@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VQ21: (2017-11-24 )
MNAVATDTQPLVGIIMGSQSDWATLEHTANMLKQLGVPFEAEVVSAHRTPDRLFEYAETARDRGIQVIIAGAGGAAHLPGMCAAKTDLPVLGVPVKSSILNGVDSLLSIVQMPAGIAVGTLAIGPAGATNAAIMAAQILGLTRPEIAKNVADFRAAQTDKVASNNIPGQV

Atome Classification :

(41 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

C2R_I_9(2NSL)
PURE_ECOLI
[Raw transfer]




NIA_A_2(2NSH)
PURE_ECOLI
[Raw transfer]




AIR_A_3(5CLJ)
?
[Raw transfer]




AIR_A_3(5CLI)
?
[Raw transfer]




C2R_I_9(2NSJ)
PURE_ECOLI
[Raw transfer]




AIR_I_9(2FWJ)
?
[Raw transfer]




AIR_A_3(2FWI)
?
[Raw transfer]




CIT_B_3(2FW6)
?
[Raw transfer]




CIT_M_13(2FWP)
?
[Raw transfer]




RP5_A_7(4Z7J)
?
[Raw transfer]




CIT_A_4(5CVT)
?
[Raw transfer]




CIT_A_3(1U11)
?
[Raw transfer]




CIT_B_6(5CVT)
?
[Raw transfer]




CIT_B_3(5CLG)
?
[Raw transfer]




FMT_D_25(3OPQ)
?
[Raw transfer]




FMT_A_7(3LP6)
PURE_MYCTU
[Raw transfer]




FMT_A_7(3LP6)
PURE_MYCTU
[Raw transfer]




CIT_B_5(5CLJ)
?
[Raw transfer]




CIT_B_4(1U11)
?
[Raw transfer]




CIT_B_4(1U11)
?
[Raw transfer]




GOL_B_9(3LP6)
PURE_MYCTU
[Raw transfer]




FMT_C_21(3LP6)
PURE_MYCTU
[Raw transfer]




FMT_C_21(3LP6)
PURE_MYCTU
[Raw transfer]




FMT_D_26(3LP6)
PURE_MYCTU
[Raw transfer]




EDO_B_10(4Z7J)
?
[Raw transfer]




EDO_A_3(5CLF)
?
[Raw transfer]




EDO_A_4(4ZC8)
?
[Raw transfer]




EDO_B_6(5CLF)
?
[Raw transfer]




ACY_I_9(2FW1)
?
[Raw transfer]




ACY_M_13(2FW1)
?
[Raw transfer]




EDO_A_5(4ZC8)
?
[Raw transfer]




94 HHSearch 93.9961%-160 - C8 -1U11 3.7 ?
30 PsiBlast_CBE 93.9862%-164 - C8 -4YCJ - ? -
17 PsiBlast_PDB 93.9862%-161 - C8 -4Z7J 3.4 ?
44 PsiBlast_CBE 93.9262%-154 - C8 -2FWP 4.2 ?
102 Fugue 93.9155%-170 - C8 -1O4V - PURE_THEMA -
9 PsiBlast_PDB 93.8462%-161 - C8 -5CLF 3.7 ?
88 HHSearch 93.8366%-162 - C8 -3OPQ 3.3 ?
85 HHSearch 93.8061%-165 - C8 -3KUU - ? -
15 PsiBlast_PDB 93.6962%-166 - C8 -5CTJ - ? -
96 HHSearch 93.6465%-160 - C8 -3OOW - ? -
54 PsiBlast_CBE 93.6462%-166 - C8 -4YCC - ? -
13 PsiBlast_PDB 93.5462%-163 - C8 -4YCJ - ? -
34 PsiBlast_CBE 93.5362%-161 - C8 -4YCB - ? -
48 PsiBlast_CBE 93.5062%-162 - C8 -5CVT 3.0 ?
91 HHSearch 93.4961%-161 * C8 *4YCB - ? -
35 PsiBlast_CBE 93.4662%-166 - C8 -4YCB - ? -
49 PsiBlast_CBE 93.4562%-163 - C8 -5CTJ - ? -
41 PsiBlast_CBE 93.4462%-161 - C8 -5CLJ 4.4 ?
32 PsiBlast_CBE 93.3862%-164 - C8 -4Z7J 3.5 ?
29 PsiBlast_CBE 93.2462%-161 - C8 -1U11 3.7 ?
12 PsiBlast_PDB 93.0062%-158 - C8 -1U11 3.8 ?
8 PsiBlast_PDB 92.9662%-159 - C8 -2FWJ 4.7 ?
14 PsiBlast_PDB 92.8862%-162 - C8 -4ZC8 3.3 ?
10 PsiBlast_PDB 92.6562%-160 - C8 -5CLI 4.6 ?
7 PsiBlast_PDB 92.5762%-160 - C8 -2FW1 3.6 ?
28 PsiBlast_CBE 92.5662%-160 - C8 -2FW1 3.3 ?
16 PsiBlast_PDB 92.5562%-163 - C8 -5CVT 2.9 ?
27 PsiBlast_CBE 92.5262%-161 - C8 -5CLF 3.6 ?
45 PsiBlast_CBE 92.5062%-155 - C8 -2FW6 3.7 ?
43 PsiBlast_CBE 92.4762%-155 - C8 -5CLG 3.9 ?
40 PsiBlast_CBE 92.3462%-153 - C8 -5CLJ 4.1 ?
47 PsiBlast_CBE 92.0962%-162 - C8 -2FWI 3.8 ?
57 PsiBlast_CBE 91.2963%-167 - C8 -2NSL 6.1 PURE_ECOLI
55 PsiBlast_CBE 90.6563%-163 - C8 -2NSJ 5.9 PURE_ECOLI
56 PsiBlast_CBE 90.4563%-163 - C8 -2NSH 5.7 PURE_ECOLI
83 HHSearch 88.9651%-174 - C8 -3LP6 3.6 PURE_MYCTU
59 PsiBlast_CBE 87.8952%-177 - C8 -3LP6 3.6 PURE_MYCTU
58 PsiBlast_CBE 87.8252%-175 - C8 -3LP6 3.0 PURE_MYCTU
60 PsiBlast_CBE 87.3452%-173 - C8 -3LP6 3.6 PURE_MYCTU
84 HHSearch 86.7551%-171 - C8 -3LP6 3.4 PURE_MYCTU
61 PsiBlast_CBE 86.2852%-172 - C8 -3LP6 3.4 PURE_MYCTU