@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VQC8: (2017-11-26 )
MNSICIFCGSSLGSNPIFQQIAQLTGEAIAKQGKTLVYGGGRSGLMGVVADSALQAGGQVIGVIPRALVDRELAHPGLTKLYVVENMHERKTKMADLSDGFIALPGGAGTLEEIFEQWIWAQLGIHQKPCAFLNVAGFYEDLLKMIQGTVDNGFSQARFVDKLIASDKIEDILQQFEQYQAPAPKWTNADVQP

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

TAR_A_7(5AJT)
?
[Raw transfer]




TAR_A_7(5AJT)
?
[Raw transfer]




TAR_C_11(5AJT)
?
[Raw transfer]




SRT_D_13(5AJT)
?
[Raw transfer]




RP5_A_2(5AJU)
?
[Raw transfer]




TAR_B_9(5AJT)
?
[Raw transfer]




GOL_A_6(5ITS)
?
[Raw transfer]




EDO_A_5(2Q4D)
LOG8_ARATH
[Raw transfer]




GOL_C_12(5ITS)
?
[Raw transfer]




GOL_C_12(5ITS)
?
[Raw transfer]




EDO_A_7(1YDH)
LOG8_ARATH
[Raw transfer]




EDO_A_7(1YDH)
LOG8_ARATH
[Raw transfer]




UNL_B_4(3QUA)
?
[Raw transfer]




UNL_A_3(3QUA)
?
[Raw transfer]




UNL_A_3(3QUA)
?
[Raw transfer]




21 PsiBlast_CBE 94.3047%-150 - C5 -5ITS - ? -
23 PsiBlast_CBE 92.1947%-150 - C5 -5ITS - ? -
1 PsiBlast_PDB 90.8047%-147 - C5 -5ITS 2.9 ?
22 PsiBlast_CBE 90.2347%-151 - C5 -5ITS 2.0 ?
45 HHSearch 87.4245%-136 - C5 -1T35 - YVDD_BACSU -
53 HHSearch 87.1837%-160 - C5 -3SBX - LOGH_MYCMM -
2 PsiBlast_PDB 85.3342%-143 - C5 -1T35 - YVDD_BACSU -
24 PsiBlast_CBE 84.6544%-149 - C5 -3QUA 2.8 ?
6 PsiBlast_PDB 84.0837%-159 - C5 -3SBX - LOGH_MYCMM -
3 PsiBlast_PDB 84.0444%-143 - C5 -3QUA 2.8 ?
33 PsiBlast_CBE 83.6137%-155 - C5 -3SBX - LOGH_MYCMM -
29 PsiBlast_CBE 83.5937%-155 - C5 -3SBX - LOGH_MYCMM -
30 PsiBlast_CBE 83.5237%-155 - C5 -3SBX - LOGH_MYCMM -
31 PsiBlast_CBE 83.4237%-157 - C5 -3SBX - LOGH_MYCMM -
46 HHSearch 83.1745%-132 - C5 -1T35 - YVDD_BACSU -
34 PsiBlast_CBE 83.1537%-151 - C5 -3SBX - LOGH_MYCMM -
32 PsiBlast_CBE 83.0037%-154 - C5 -3SBX - LOGH_MYCMM -
28 PsiBlast_CBE 82.8737%-152 - C5 -3SBX - LOGH_MYCMM -
47 HHSearch 82.6847% -48 - C5 -5ITS - ? -
51 HHSearch 79.0043% -61 - C5 -2A33 - LOG3_ARATH -
48 HHSearch 78.8947% -54 - C5 -5ITS 2.0 ?
58 HHSearch 78.7343% -82 * C5 *3QUA 2.8 ?
52 HHSearch 78.7239% -72 - C5 -1YDH 3.2 LOG8_ARATH
7 PsiBlast_PDB 78.6541%-168 - C5 -1YDH 3.2 LOG8_ARATH
8 PsiBlast_PDB 76.5341%-158 - C5 -2Q4D 3.6 LOG8_ARATH
5 PsiBlast_PDB 74.0236% -44 - C5 -5AJU 2.5 ?
27 PsiBlast_CBE 73.8736% -42 - C5 -5AJT 3.4 ?
25 PsiBlast_CBE 73.6036% -42 - C5 -5AJT 3.5 ?
4 PsiBlast_PDB 73.3536% -39 - C5 -5AJT 4.1 ?
26 PsiBlast_CBE 73.1136% -42 - C5 -5AJT 2.5 ?
44 HHSearch 73.0839% -27 - C5 -5AJT 4.1 ?