@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : I3U1S3: (2017-12-21 )
MKQLSSAQVRQMFLDFFQSKGHTIEPSASLIPVNDPTLLWINSGVATLKKYFDGSVVPENPRITNAQKSIRTNDIENVGKTARHHTMFEMLGNFSIGDYFKNEAIHWAWEFLTDPKWMAFDPEKLYVTVYPKDTEAKRIWHEEVGLPLDHIIDVEDNFWDIGAGPCGPDTEIFYDRGEAYNDLAEDDPENYPGGENERYLEIWNLVFSEFNHKPDNTFEPLPHKNIDTGMGLERMVSIVQDASTNFETDLFMPIIHAVEKLSKQVKYGENPVTDISYKVIADHIRALSFAIGDGALPSNEGRGYVLRRLLRRAVMHGKKLGIEQAFLYRLVPVVGEIMVSYYPEVLQQKEFIEKVIRTEEERFNETINEGLEILNQVIQEVKNENGTTLAGKDIFKLYDTYGFPVELTEEVAEDEGLKVDHAGFEKEMDAQRERARSARSTEKSMGVQSALLTDIKVESKFIGYTEQESDSQLLVIVKGESLLNEVAEGEAQMIFDQTPFYAEMGGQVADQGWIMNEVGEIVAVVTDVQKAPNGQFMHTVEVKAPMSEGQTYHLLIDQSMRNRIIKNHTATHLLHKALKEVLGEHANQAGSLVAPGHLRFDFTHFGQITSDELAEMERIVNEKIWEAIPVETIETDIDTAKNMGAMALFGEKYGHDVRVVNIGGWSIELCGGTHVANTENIGIFKIVSESGIGAGVRRIEAVTSKEAYELLEEEEKQLKQVATIVKSPQLKEVVSKAEQLQQQVRELQKENEQLASKLANQQAGDVFKDPETINGKTIIAAQVKVKDMNQLRQLADQWKQKNISDILVLANEQEGKVSLLAAMTKESNEAGLKAGDLIKAIAPKVGGGGGGRPDMAQAGGKNPAGIPDALKAAKEWVAQQ

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

A5A_A_2(3HXU)
SYA_ECOLI
[Raw transfer]



5AL_A_2(3HXY)
SYA_ECOLI
[Raw transfer]



SSA_A_2(3HXW)
SYA_ECOLI
[Raw transfer]



A5A_A_3(4XEO)
SYAC_HUMAN
[Raw transfer]



A5A_B_9(4XEO)
SYAC_HUMAN
[Raw transfer]



A5A_A_2(4XEM)
SYAC_HUMAN
[Raw transfer]



A5A_A_2(4XEM)
SYAC_HUMAN
[Raw transfer]



SSA_A_3(3HY1)
SYA_ECOLI
[Raw transfer]



G5A_B_7(3HY0)
SYA_ECOLI
[Raw transfer]



G5A_A_3(3HY0)
SYA_ECOLI
[Raw transfer]



G5A_A_3(3HY0)
SYA_ECOLI
[Raw transfer]



G5A_A_4(3HXV)
SYA_ECOLI
[Raw transfer]



ACP_A_2(3HXX)
SYA_ECOLI
[Raw transfer]



ATP_B_10(1YFR)
SYA_AQUAE
[Raw transfer]



ATP_A_9(1YFR)
SYA_AQUAE
[Raw transfer]



GLY_B_2(1YFT)
SYA_AQUAE
[Raw transfer]



ALA_D_4(1YFS)
SYA_AQUAE
[Raw transfer]



SER_B_2(1YGB)
SYA_AQUAE
[Raw transfer]



ALA_C_3(1YFS)
SYA_AQUAE
[Raw transfer]
18 PsiBlast_PDB 75.9426% 34 * C1 *3WQY - SYA_ARCFU -
42 HHSearch 74.0450% 23 - C1 -3HY0 5.7 SYA_ECOLI
19 PsiBlast_PDB 73.8726% 40 - C1 -3WQZ - SYA_ARCFU -
43 HHSearch 73.7350% 23 - C1 -3HXZ - SYA_ECOLI -
14 PsiBlast_PDB 72.1148% 7 - C1 -1RIQ - SYA_AQUAE -
10 PsiBlast_PDB 72.0948% 21 - C1 -3HXY 8.8 SYA_ECOLI
9 PsiBlast_PDB 71.9048% 24 - C1 -3HXX 10.1 SYA_ECOLI
13 PsiBlast_PDB 71.7948% 20 - C1 -3HY1 7.6 SYA_ECOLI
37 HHSearch 71.6928% 17 - C1 -2ZTG - SYA_ARCFU -
12 PsiBlast_PDB 71.6348% 26 - C1 -3HY0 5.7 SYA_ECOLI
3 PsiBlast_PDB 71.6348% 5 - C1 -1YFS 2.6 SYA_AQUAE
2 PsiBlast_PDB 71.5248% 5 - C1 -1YFR 4.1 SYA_AQUAE
11 PsiBlast_PDB 71.5148% 25 - C1 -3HXZ - SYA_ECOLI -
21 PsiBlast_CBE 71.4848% 9 - C1 -1YFS 3.8 SYA_AQUAE
1 PsiBlast_PDB 71.4348% 5 - C1 -3HTZ - SYA_AQUAE -
6 PsiBlast_PDB 71.4148% 24 - C1 -3HXU 8.8 SYA_ECOLI
7 PsiBlast_PDB 71.3248% 25 - C1 -3HXV 5.8 SYA_ECOLI
8 PsiBlast_PDB 71.2648% 26 - C1 -3HXW 8.7 SYA_ECOLI
22 PsiBlast_CBE 71.2248% 8 - C1 -1YFR 5.3 SYA_AQUAE
27 PsiBlast_CBE 71.1548% 26 - C1 -3HXZ - SYA_ECOLI -
5 PsiBlast_PDB 71.0648% 7 - C1 -1YGB 3.4 SYA_AQUAE
4 PsiBlast_PDB 71.0148% 11 - C1 -1YFT 3.1 SYA_AQUAE
24 PsiBlast_CBE 70.9548% 26 - C1 -3HY0 5.7 SYA_ECOLI
17 PsiBlast_PDB 62.1040% 26 - C1 -4XEO 9.1 SYAC_HUMAN
16 PsiBlast_PDB 61.9741% 20 - C1 -4XEM 8.8 SYAC_HUMAN
35 PsiBlast_CBE 61.4740% 14 - C1 -4XEO 9.1 SYAC_HUMAN
38 HHSearch 61.4243% 29 - C1 -4XEM 8.8 SYAC_HUMAN