@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : I3U2Q2: (2017-12-23 )
MMSNSSVIDAMCYNNSVKSKMKWRKDMDGLLPLWKERGMTSHDCVFKLRKILHTKKIGHGGTLDPDVDGVLPICIGKATKVIEYLTDSGKIYVGEITLGFSTTTEDRSGERVETKPVDMSLSEKKIDEVMASFIGEITQIPPMYSAVKVNGKRLYEYARNNETVERPVRKAQIYRFIRTSELTRDEVTGTISWRFEVECGKGTYVRTLAVDTGKKLGYPAHMSDLTRTASAGMSQKDALTLEEVAQAVKNGTIDDCLLPIEKGVERFKRVDITDEVWQKVKNGMRLDYTVFALPEMPSEEIALFYKGKVVSIYQPNPKEKNKLKPSKVLRNEE

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

URA_A_2(1KSK)
RSUA_ECOLI
[Raw transfer]



NACID_E_5(3LWO)
TRUB_PYRFU
[Raw transfer]
-
BU1_A_4(1VIO)
RSUA_HAEIN
[Raw transfer]



NACID_F_6(3HAY)
TRUB_PYRFU
[Raw transfer]
-
NACID_F_5(3HAX)
TRUB_PYRFU
[Raw transfer]
-
NACID_E_5(3LWV)
TRUB_PYRFU
[Raw transfer]
-
NACID_E_5(3LWR)
TRUB_PYRFU
[Raw transfer]
-
NACID_E_5(3HJW)
TRUB_PYRFU
[Raw transfer]
-
NACID_E_5(3HJY)
TRUB_PYRFU
[Raw transfer]
-
31 Fugue 92.3133% -71 - C3 -1R3E - TRUB_THEMA -
39 HHSearch 90.3633% -80 - C3 -1R3E - TRUB_THEMA -
3 PsiBlast_PDB 89.0534%-102 - C3 -1R3E - TRUB_THEMA -
38 HHSearch 88.9733% -54 - C3 -1K8W - TRUB_ECOLI -
29 Fugue 88.2933% -48 - C3 -1K8W - TRUB_ECOLI -
2 PsiBlast_PDB 86.0636% -70 - C3 -1K8W - TRUB_ECOLI -
6 PsiBlast_PDB 85.6336% -68 - C3 -1ZL3 - TRUB_ECOLI -
4 PsiBlast_PDB 85.4834%-103 - C3 -1ZE2 - TRUB_THEMA -
7 PsiBlast_PDB 84.4934%-106 - C3 -2AB4 - TRUB_THEMA -
5 PsiBlast_PDB 84.4134% -98 - C3 -1ZE1 - TRUB_THEMA -
40 HHSearch 84.2833% -77 - C3 -1ZE1 - TRUB_THEMA -
37 HHSearch 80.9234% -78 - C3 -1SGV - TRUB_MYCTU -
13 PsiBlast_PDB 79.5234% -93 - C3 -3LWP - TRUB_PYRFU -
11 PsiBlast_PDB 79.3834% -81 - C3 -3HAY 7.7 TRUB_PYRFU
9 PsiBlast_PDB 79.2934% -91 - C3 -2HVY - TRUB_PYRFU -
20 PsiBlast_PDB 79.2334% -85 - C3 -3HJY 3.4 TRUB_PYRFU
19 PsiBlast_PDB 79.0734% -83 - C3 -3HJW 9.5 TRUB_PYRFU
12 PsiBlast_PDB 79.0734% -90 - C3 -3LWO 4.5 TRUB_PYRFU
16 PsiBlast_PDB 78.7434% -87 - C3 -3LWV 3.4 TRUB_PYRFU
18 PsiBlast_PDB 78.6834% -94 - C3 -3MQK - TRUB_PYRFU -
15 PsiBlast_PDB 77.6034% -88 - C3 -3LWR 2.8 TRUB_PYRFU
10 PsiBlast_PDB 75.9134% -81 - C3 -3HAX 9.5 TRUB_PYRFU