@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : I3U2T8: (2017-12-23 )
MFTKCFIINLPYEFTKFYFVCFHHKSKLRFLNYIESTNTILLIKGVFFMTILVLGGAGYIGSHAVDQLVQKGYQVAVVDNLLTGHKQAVHPDAHFYEGDIRDKEFLRSVFEKEPIEGVIHFAASSLVGESVEKPLMYFNNNVYGMQILLEVMHEFNVNKIVFSSTAATYGEPKESPITEDTPANPKNPYGESKLMMEKMMKWCDQAYGMRYVALRYFNVAGAKADASIGEDHTPETHLVPIILQVALGQRKALAVYGDDYDTPDGTCIRDYVQVEDLIAAHILALEYLKEGNESNFFNLGSSKGYSVKEMLEAAREVTGKEIPAEIAPRRAGDPSRLVASSEKAREILGWKPEYTDIKAIIKTAWDWHVSHPNGYEE

Atome Classification :

(42 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAI_B_7(1EK6)
GALE_HUMAN
[Raw transfer]




NAD_A_2(4WOK)
?
[Raw transfer]




NAD_A_2(4WOK)
?
[Raw transfer]




NAD_A_5(1Z45)
GAL10_YEAST
[Raw transfer]




NAD_A_4(1KVS)
GALE_ECOLI
[Raw transfer]




NAD_A_5(1A9Z)
GALE_ECOLI
[Raw transfer]




NAD_A_6(1A9Y)
GALE_ECOLI
[Raw transfer]




NAD_A_2(4TWR)
?
[Raw transfer]




NAD_A_5(1UDA)
GALE_ECOLI
[Raw transfer]




NAD_A_5(1Z45)
GAL10_YEAST
[Raw transfer]




NAD_A_5(1UDC)
GALE_ECOLI
[Raw transfer]




NAD_A_7(1HZJ)
GALE_HUMAN
[Raw transfer]




NAD_A_3(3ENK)
?
[Raw transfer]




NAD_A_6(1KVR)
GALE_ECOLI
[Raw transfer]




NAD_A_4(1XEL)
GALE_ECOLI
[Raw transfer]




NAD_A_5(1UDB)
GALE_ECOLI
[Raw transfer]




NAD_B_10(1I3N)
GALE_HUMAN
[Raw transfer]




NAD_A_3(1KVT)
GALE_ECOLI
[Raw transfer]




NAD_B_5(3ENK)
?
[Raw transfer]




NAD_B_10(1I3M)
GALE_HUMAN
[Raw transfer]




NAI_A_5(1EK6)
GALE_HUMAN
[Raw transfer]




NAD_B_9(1HZJ)
GALE_HUMAN
[Raw transfer]




NAD_A_4(1NAI)
GALE_ECOLI
[Raw transfer]




NAD_A_9(1I3L)
GALE_HUMAN
[Raw transfer]




NAD_A_4(1NAH)
GALE_ECOLI
[Raw transfer]




NAD_B_6(2UDP)
GALE_ECOLI
[Raw transfer]




NAD_A_4(1LRK)
GALE_ECOLI
[Raw transfer]




GUD_A_4(3ENK)
?
[Raw transfer]




GDU_B_4(1I3L)
GALE_HUMAN
[Raw transfer]




UPG_A_4(4LIS)
?
[Raw transfer]




GDU_A_3(1I3L)
GALE_HUMAN
[Raw transfer]




EDO_A_10(1UDC)
GALE_ECOLI
[Raw transfer]




EDO_A_6(1NAH)
GALE_ECOLI
[Raw transfer]




23 PsiBlast_CBE 95.6763%-105 - C1 -2C20 - ? -
1 PsiBlast_PDB 94.7463%-107 - C1 -2C20 - ? -
25 PsiBlast_CBE 93.6263%-105 - C1 -2C20 - ? -
24 PsiBlast_CBE 92.5363%-106 - C1 -2C20 - ? -
75 HHSearch 92.5264%-106 - C1 -2C20 - ? -
21 PsiBlast_CBE 91.6863%-104 - C1 -2C20 - ? -
22 PsiBlast_CBE 91.1263%-105 - C1 -2C20 - ? -
88 HHSearch 84.7047% -96 - C1 -4WOK 13.0 ?
3 PsiBlast_PDB 84.1549% -98 - C1 -4WOK 13.0 ?
2 PsiBlast_PDB 81.6849% -98 - C1 -4TWR 13.1 ?
5 PsiBlast_PDB 68.9943% -8 - C1 -2CNB - ? -
4 PsiBlast_PDB 68.8843% -14 - C1 -1GY8 - ? -
28 PsiBlast_CBE 68.5243% -13 - C1 -1GY8 - ? -
29 PsiBlast_CBE 68.1143% -13 - C1 -1GY8 - ? -
26 PsiBlast_CBE 67.6643% -11 - C1 -2CNB - ? -
6 PsiBlast_PDB 67.0142% 15 - C1 -3ENK 12.0 ?
67 Fugue 66.8541% 7 - C1 -1Z45 12.4 GAL10_YEAST
27 PsiBlast_CBE 65.5043% -8 - C1 -1GY8 - ? -
50 PsiBlast_CBE 65.3039% -1 - C1 -4LIS - ? -
51 PsiBlast_CBE 65.2539% -4 - C1 -4LIS 6.6 ?
12 PsiBlast_PDB 65.0240% -1 - C1 -1I3L 10.5 GALE_HUMAN
30 PsiBlast_CBE 64.6942% 15 - C1 -3ENK 11.9 ?
31 PsiBlast_CBE 64.1140% 1 - C1 -1HZJ 9.5 GALE_HUMAN
38 PsiBlast_CBE 64.0439% -1 - C1 -1XEL 11.4 GALE_ECOLI
42 PsiBlast_CBE 64.0239% -2 - C1 -1NAH 11.1 GALE_ECOLI
19 PsiBlast_PDB 63.9439% -1 - C1 -1UDC 11.4 GALE_ECOLI
32 PsiBlast_CBE 63.9040% 3 - C1 -1EK6 10.4 GALE_HUMAN
39 PsiBlast_CBE 63.8439% 0 - C1 -1UDB 11.4 GALE_ECOLI
41 PsiBlast_CBE 63.8139% -1 - C1 -1NAI 11.0 GALE_ECOLI
40 PsiBlast_CBE 63.7239% 0 - C1 -1UDA 11.4 GALE_ECOLI
48 PsiBlast_CBE 63.5039% -2 - C1 -1A9Z 10.8 GALE_ECOLI
45 PsiBlast_CBE 63.4939% 2 - C1 -1KVT 10.3 GALE_ECOLI
16 PsiBlast_PDB 63.4639% -3 - C1 -1LRK 11.4 GALE_ECOLI
37 PsiBlast_CBE 63.4539% 1 - C1 -2UDP 10.6 GALE_ECOLI
93 HHSearch 63.3140% 16 - C1 -1A9Y 10.5 GALE_ECOLI
10 PsiBlast_PDB 63.2840% -0 - C1 -1EK6 10.9 GALE_HUMAN
43 PsiBlast_CBE 62.9639% -1 - C1 -1KVR 11.4 GALE_ECOLI
33 PsiBlast_CBE 62.9140% -0 - C1 -1I3N 9.9 GALE_HUMAN
34 PsiBlast_CBE 62.8440% -1 - C1 -1I3M 9.9 GALE_HUMAN
8 PsiBlast_PDB 62.7440% -1 - C1 -1HZJ 10.3 GALE_HUMAN
15 PsiBlast_PDB 61.1239% 4 - C1 -1KVS 9.6 GALE_ECOLI
7 PsiBlast_PDB 58.8140% 15 - C1 -1Z45 12.4 GAL10_YEAST