@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : I3U3W4: (2017-12-25 )
MTTPYKYQMLPMEKVFRDPVHNYIHVQHKVILDLINSKEVQRLRRIKQLGTSSFTFHGAEHSRFTHSLGVYEISRRICDIFSRNFSKEKIGNGGWDDQERLVTLCAALLHDVGHGPYSHTFEHIFHTNHEAITVEIITSPETEVYQILNRVEEGFPEKVASVIQKTYPNPQVVQMISSQIDADRMDYLLRDAYFTGTEYGTFDLTRILRVIRPYEGGIAFSMSGMHAVEDYIVSRYQMYVQVYFHPVSRGMEVILEHLLHRAHELYQEDASSFELHSQLLLPFLDGSFTLEEYLKLDDGVLGTYFTQWSESADPILNDLAKRFLNRKPLKSATFSGNRDSKLVQELTLLVEKVGYNPVYYTAVNSSYDLPYDFYRPEQGRHRTQIEILRNDGTLIELSQVSQLVAALAGQEQGDERFFFPKEMVDPSLRDHYDLFDETYQEFASHIRNGALIEIN

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

TTP_B_10(4RXS)
SAMH1_HUMAN
[Raw transfer]




DCP_B_7(4RXR)
SAMH1_HUMAN
[Raw transfer]




DUT_B_10(4RXQ)
SAMH1_HUMAN
[Raw transfer]




DTP_B_10(4RXP)
SAMH1_HUMAN
[Raw transfer]




DTP_B_12(4MZ7)
SAMH1_HUMAN
[Raw transfer]




GDP_A_15(2HEK)
?
[Raw transfer]




GDP_A_16(2HEK)
?
[Raw transfer]




23 PsiBlast_CBE 90.0478% -92 - C3 -4LRL - ? -
2 PsiBlast_PDB 89.8578% -92 - C3 -3IRH - ? -
3 PsiBlast_PDB 89.7878% -86 - C3 -4LRL - ? -
22 PsiBlast_CBE 88.7678% -87 - C3 -4LRL - ? -
25 PsiBlast_CBE 88.3478% -91 - C3 -3IRH - ? -
26 PsiBlast_CBE 88.2778% -89 - C3 -3IRH - ? -
24 PsiBlast_CBE 88.0478% -96 - C3 -3IRH - ? -
1 PsiBlast_PDB 87.9678%-100 - C3 -2O6I - ? -
21 PsiBlast_CBE 87.5578% -94 - C3 -4LRL - ? -
30 HHSearch 86.2978% -54 - C3 -4LRL - ? -
29 HHSearch 85.5878% -57 - C3 -4LRL - ? -
5 PsiBlast_PDB 55.8129% -36 - C3 -2Q14 - ? -
32 HHSearch 55.3228% -19 * C3 *2Q14 - ? -
31 HHSearch 52.1428% -16 - C3 -2Q14 - ? -
34 HHSearch 48.4321% -27 - C3 -4MZ7 - SAMH1_HUMAN -
58 Fugue 48.1631% -3 - C3 -2HEK - ? -
36 HHSearch 47.6421% -29 - C3 -4TO4 - SAMH1_HUMAN -
33 HHSearch 46.5532% -25 - C3 -2HEK - ? -
4 PsiBlast_PDB 44.1638% -50 - C3 -2HEK 3.7 ?
28 PsiBlast_CBE 42.7438% -53 - C3 -2HEK 3.9 ?